Ochotona princeps (American pika): 101529259
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Entry
101529259 CDS
T07609
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04120
Ubiquitin mediated proteolysis
opi04137
Mitophagy - animal
opi04144
Endocytosis
opi04340
Hedgehog signaling pathway
opi04350
TGF-beta signaling pathway
opi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101529259
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101529259
04350 TGF-beta signaling pathway
101529259
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101529259
04137 Mitophagy - animal
101529259
09144 Cellular community - eukaryotes
04520 Adherens junction
101529259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101529259
04121 Ubiquitin system [BR:
opi04121
]
101529259
03029 Mitochondrial biogenesis [BR:
opi03029
]
101529259
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101529259
Membrane trafficking [BR:
opi04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
101529259
Autophagy
Mitophagy
Other mitophagy associated proteins
101529259
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
HECT type E3
101529259
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101529259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
WW
C2
HEAT_EZ
IBB
Arm_3
HEAT_2
ARM_ARMC5
DUF7350
Motif
Other DBs
NCBI-GeneID:
101529259
NCBI-ProteinID:
XP_012786540
LinkDB
All DBs
Position
13:complement(133711668..133875489)
Genome browser
AA seq
1073 aa
AA seq
DB search
MPALDAPEERLRKFKYRGKDASMRRHQRLVASLELRKARKDEQALKRRNITNFPPKPSSE
KPAKEVAFLRNITWTLSNLCRNKNPYPCDEAVRQLLPVLFHLLQHHDREIVSDTCWALSY
LTEGCNERIDRVVNIGVLPRLVELMTSQELSILIPSLRTVGNIVTGTEHQTQMAIDAGLL
KVLPHLLRHPKTSIQKEAAWVLSNVAAGSQQQIQLLIVYDLLPLLVALLKNGEFQVQKEA
VWTVANFTMGATVSQLFQLVYSGVLGPLVNLLTAPDPKIVLIILDVISYFLQEAEKLREK
DRLYFLIEGLGGIERIETLQLHVNQQIAQTALSLIEKHFGEVSLNLDEIVRGVNSSDPDL
CFQATLAVRKMLSQERNPPLKMIIDMGFIPRLVAFLKSSLPFLQFEAAWALTNIASGTSE
QTRAVVEAVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYV
GKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAVSRLKDTGYQRLDLCKLNPSDTDAVR
GQIVVSLQTRDRIGPGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPAPYTDGPAAAA
GGGNCRFVESPGQDQRLQAQRLRNPEVRGSLQTPQNRPHGHQSPELPEGYEQRTTVQGQV
YFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTD
PRLHHIMNHQCQLKEPSQQLPLPSEGSVEDEELPAQRYERDLVQKLKVLRHELSLQQPQA
GHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVASFRVKPERGGRN
SEAQDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSL
VWILENDITPVLDHTFCVEHNAFGRILQHELKPDGRNVPVTEENKKEYLIIGGLDKIDLN
DWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGAAGP
RLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctctagacgctcccgaggagaggctgaggaagttcaaataccgaggcaaagat
gcatctatgaggcggcaccagcgcctggtggctagcctggagctccggaaggccaggaaa
gatgagcaggccttgaagaggaggaatatcaccaatttccctcccaagccatcttcggaa
aaacctgccaaagaggtcgcatttctgcggaacatcacatggaccttgtccaacctgtgc
cgcaacaagaatccgtatccttgcgacgaggcggtgaggcagctgctgcctgttctcttc
cacctcctgcagcaccatgacagagagattgtctcggacacctgctgggccttgtcctac
ctcacagagggctgcaacgagcgcattgaccgagtggtcaacattggggtcttgcccagg
ctggtagagctcatgaccagccaggagctcagcatcctgattccttctctccgcacggtg
gggaacattgtcacaggaactgaacaccagacccagatggccatcgacgcaggtctgctg
aaggtgctgccccacctcctgaggcaccccaaaacctccatccagaaggaggcggcctgg
gtcctaagcaatgtggctgcaggatctcaacagcaaatccagctgctgattgtgtacgac
ttgctgcctctcttggtggctctgctgaaaaatggggagtttcaagtccagaaggaggca
gtctggacggtggccaacttcacaatgggggccactgtgagccagttgtttcagctggtc
tactcgggggtcttggggcccctggtgaatctgctcaccgctccagatcctaagattgtc
ctcatcatccttgatgtcatctcttacttcctccaggaggcagagaagctgcgtgagaag
gacagactatactttctgatagaagggcttggcgggattgaaagaattgagaccttgcag
ctgcacgtgaatcagcagatcgcgcagaccgccctgagcctcatcgagaagcactttggc
gaggtcagcctcaatctggatgaaatcgtgagaggtgtgaacagctcagaccctgacctt
tgcttccaggccacccttgcagtcaggaaaatgctgtcccaggaaaggaacccccctctg
aagatgattattgacatggggttcatccccaggctggtggcgttcctgaagtcatcgctg
cccttcttgcagtttgaggcagcctgggctctgaccaacatcgcttcagggacctcggag
cagactcgggccgttgtggaagcagtgttatgtgccaagaaccttgcaaagaaggacttc
ttcaggctccccgacccctttgcaaaggtcgtcgtggacgggtctggccagtgccactca
accgacactgtgaagaacacgttggaccccaagtggaaccagcattatgatctgtacgtt
ggaaagacagattctataaccatcagcgtgtggaaccacaagaaaatccacaagaagcag
ggagctggcttcctgggctgtgtgcggctgctctccaacgccgtcagcaggttgaaagac
accggataccagcgtttggatctatgcaaactaaatccctcagatactgatgcagtccgt
ggccaaatagtggtcagtttacagactcgagacaggataggtcctggcgggtccgtggta
gactgcaggggactgttggagaatgaaggaaccgtgtacgaagactcggggcctgggagg
ccactcagctgcttcatggaggagccagccccctacacagatggccccgcggctgccgct
ggcggaggaaactgcaggttcgtggagtccccaggacaagatcaaagacttcaggcacag
cgactgcgaaaccctgaagtgcgaggatcgctccagacgccccagaaccggccgcacggc
caccagtccccagagctgcccgaaggctacgaacaaaggaccacagtgcaagggcaggtt
tactttttgcacacgcagactggagtcagcacgtggcacgacccccggataccaagagac
cttaacagtgtgaattgtgatgaactcggaccactgcccccagggtgggaagtgagaagt
acagtttcaggaagaatatattttgtagaccataataaccgaacaacccagtttacagac
ccaaggttacaccacatcatgaatcaccagtgccaactcaaggagcccagccagcagctg
cccttgcccagcgaaggctcagtagaagacgaggagcttcctgcccagagatacgagcgc
gacctcgtccagaagctcaaggtcctcagacacgagctctcgcttcagcagccccaagct
ggccattgccgcatcgaagtttccagagaagaaatatttgaggagtcttatcgccagata
atgaagatgcgaccgaaagacttgaaaaagcgcctgatggtgaaattccggggggaggaa
ggcctggactacggcggggtggcaagcttccgggtgaaaccagagcgaggaggcagaaac
tccgaggctcaggaccacttgtcttacttccactttgtgggccggatcatgggcctggct
gtgttccacggacactacatcaacgggggcttcacggtccctttctacaagcagctgctg
gggaagcccatccaactgtctgacctggagtcggtggaccccgagctgcataagagcttg
gtgtggattctagagaatgacatcacgccagtcctggaccacacgttctgcgtggagcac
aacgccttcgggcgcatcctgcagcacgagctaaaacccgatggcaggaatgtgcccgtc
accgaggagaacaagaaggaatacctgatcataggcggcctggacaaaattgacttgaat
gactggaagtcaaacacgcggctgaagcactgtgtggccgacagcaacatcgtgcgatgg
ttctggcaggcggtggagaccttcgatgaagagaggagggcgcggctcttgcagttcgtg
acgggatctacgcgcgtccctctccagggcttcaaggctttgcaaggcgccgcagggccc
cggctgttcaccatccacctgatagatgccaacacggacaacctgcccaaggcacatacc
tgctttaaccggattgacattccgccttacgagtcctacgagaagctgtacgagaaactg
ctgacggcagtggaggagacctgcggcttcgccgtggagtga
DBGET
integrated database retrieval system
