Ochotona princeps (American pika): 101529270
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Entry
101529270 CDS
T07609
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101529270 (RNF38)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101529270 (RNF38)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101529270 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
zf-RING_16
zf-C3H2C3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
101529270
NCBI-ProteinID:
XP_012781214
LinkDB
All DBs
Position
1A:31539788..31572201
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AA seq
432 aa
AA seq
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MRPWEMTSNRQPPSVRPSQHHFSGERCNTPARNRRSPPVRRQRGRRDRLSRHNSISQDEN
YHHLPYAQQQAIEEPRAFHPPNVSPRLLHPAAHPPQQNAVMVDIHDQLHQGTVPVSYTVT
TVAPHGLPLCTGQHIPACSAQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAF
PPLISSDPFLIHPPHLSPHHPPHLPPPGQFVPFQTQQSRSPLQRIENEVELLGEHLPVGS
FTYPASAHPPTLPPSAPLQFLAHDPLHQEVSFGVPYPPFMARRLPGRSRYRSQQPIPPPP
YHPSLLPYVLSMLPVPPAVGPTFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADI
EQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPIC
RADASEVHRDSE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatgggagatgacatcaaataggcagcccccttcagttcgaccaagccaacat
cacttctcaggggaacgatgcaacacacctgcacgcaacagaagaagtcctcctgtcagg
cgccagagagggagaagggatcgcctgtctcgacacaattccattagtcaagatgaaaac
tatcaccatctcccttatgcacagcagcaagcaatagaagaacctcgagccttccacccc
ccgaatgtatctccccgtctgttacatcctgccgctcatccaccccagcagaatgcagta
atggttgacatacatgatcagctccatcaaggcacagtgcctgtttcctacacggtaaca
acagtggcaccacatggacttcccctctgcacaggccagcacatccctgcctgcagtgcg
cagcaggtcccaggatgctctgtggttttcagtggacagcacctccctgtctgtagtgtg
cctcctccaatgcttcaggcatgttccgttcagcacttaccagtaccatatgctgcattc
ccaccccttatttctagtgatccatttcttatacatcctcctcacctttctccccatcat
cctccacatttgccaccaccaggccagtttgtccccttccaaacgcagcaatcacgatcg
cctctgcaaaggatagaaaacgaagtggaactgttaggagaacatcttccagtcggaagt
tttacctaccctgcctcagctcatcccccaacgttgcctccatcggctcctttgcagttc
ttggcacatgaccctttgcatcaagaggtgtcctttggagtaccttaccctccgtttatg
gctcggaggctcccaggccggagcagataccgatcccagcagcccatcccaccaccccct
taccatcccagcttgctgccatatgtactatcaatgctaccagtgccacctgctgtgggc
ccaactttcagctttgaattggatgtggaagatggagaagtagaaaattatgaggccctg
ttaaacctggcagagcgactgggagaggctaagcctcgaggactgacaaaagccgacatt
gaacaacttccttcctataggttcaatcctaacaaccaccagtcagaacagaccttgtgt
gtagtgtgcatgtgtgattttgagtcaaggcagctacttagagtcttaccctgtaaccac
gagttccatgccaagtgtgttgacaaatggctaaaggcaaaccgtacttgccccatttgc
cgagctgacgcctcagaagtgcatcgggattccgagtaa
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