Ochotona princeps (American pika): 101529300
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Entry
101529300 CDS
T07609
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03013
Nucleocytoplasmic transport
opi05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101529300 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101529300 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101529300 (NUP50)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101529300 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
101529300
NCBI-ProteinID:
XP_004589488
LinkDB
All DBs
Position
4:3080485..3095560
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AA seq
450 aa
AA seq
DB search
MAKRIAEKELTDKNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGFESDGGGAFKG
FKGLVAPSGGGGFAGFGGSPGGKPLEGLSNGSTSALPLASARPAAEPTAASGSVAANGPT
ILADKKITDPPTASDGQPACGLGPRPACAGSAYHRQLAALNCCVRDWILQHVNANPLCDL
TPIFQDYEKHLASIEQQGGGCTPHDVGRTVTTSALGEQEPAFLFQGSKARDAAEKEVGLQ
KQAASLGAAGASFSFGQKLDSSAVGPLSSAPLAGFSFSSGNSSVSSTDGTQSQAASSPFP
ARTSESQAGGDHGACKGGEEEESEEPPKVVVTEVKEEDAFYSKKCKLFYKKDNEFKEKGV
GTLHLKPTASQKTQLLVRADTNLGNILLNVLIPPNMPCSRTGKNNVLIVCVPNPPLDEKN
ASAPATMLIRVKTSEDADELHRVLLERRDA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaattgctgagaaggagttgacagacaagaactgggatcaggaggatgaa
gctgaagaggtcgggacattctcggtggccagcgaggaggtcctgaagaacagagccata
aagaaagcgaagcgcagaaacgtgggatttgaatcagatggtggaggagccttcaaaggg
ttcaagggcttggtggcaccttctggaggaggaggatttgctgggttcggtgggagcccc
ggcgggaagcctctggaaggactgtcgaacggaagcacgagcgcccttcccttggccagc
gcacggccagcggcagagcccacggctgcatctggttctgttgctgcaaacggccctact
atcctggccgataaaaagatcacagatcccccgacagccagcgatggccagccagcctgc
ggcctcgggccgaggccagcctgtgctgggagcgcgtaccacaggcagctggccgccctc
aactgctgtgtgcgagactggatcctgcagcatgtgaacgccaaccccctctgcgacctg
acccccatcttccaggactacgagaagcacctggccagcatcgagcagcagggcggcggg
tgcaccccgcacgacgtgggcaggacggtgaccacatccgccctcggggagcaggaaccc
gcgtttctgtttcaaggcagcaaagccagggacgctgcggagaaggaggtcgggttgcag
aagcaggccgcgtcactgggagcagcaggtgcctcgttcagtttcggccagaagcttgac
agctccgccgtgggccccctcagctctgctcccctggctggattttcattttcctctggg
aactccagtgtatccagcacggacggtacccagagtcaagcagcttcttcgcccttcccc
gctagaacgtcagagagccaagcaggcggtgatcatggtgcatgtaagggtggagaggaa
gaggagagtgaggagccgcccaaggtcgtggtcactgaagtgaaggaagaagatgctttt
tactccaaaaagtgtaagctattttacaaaaaagacaatgaatttaaagagaagggtgtg
ggcacgctgcacctcaagcctacagcaagtcagaagacgcagctgttagtacgggctgac
accaacctcggcaacatcctgctcaatgttctgatcccgcccaacatgccgtgcagccgc
accgggaagaacaacgtgctgatcgtctgcgtccccaaccccccgctcgacgagaagaac
gccagcgccccggccaccatgctcatccgggtgaaaacgagcgaggacgcggacgagctg
cacagggtcctgctggagaggagggacgcctga
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