Ochotona princeps (American pika): 101529338
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Entry
101529338 CDS
T07609
Symbol
LEFTY1
Name
(RefSeq) left-right determination factor 1 isoform X1
KO
K04668
left-right determination factor
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04350
TGF-beta signaling pathway
opi04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
101529338 (LEFTY1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101529338 (LEFTY1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
opi04052
]
101529338 (LEFTY1)
Cytokines and neuropeptides [BR:
opi04052
]
Cytokines
Transforming growth factors (RSTK binding)
101529338 (LEFTY1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Motif
Other DBs
NCBI-GeneID:
101529338
NCBI-ProteinID:
XP_004578657
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Position
16:complement(33281391..33284584)
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AA seq
367 aa
AA seq
DB search
MRPLWLCWTLWLLSLAPPGAALSGEQILASLLQQLHLHQAPVLDRADLEGLAVPAHVRAQ
YVALLQHGHRERSRGKRFSQNFREVAGRLLITEAHTHLLVFGMEQRLPPNNELVQAVLRL
FQEPVPKATLRRHERLPPHSAQARVTVEWLRIRDDGSNHTSLIDSRLVSIHQSGWKAFDV
TEAVNFWQQLREPRQPLLLQVSVQREHLGAGSSSAHRLVRFAWQGEAGGVSSEPQLELHT
LDLKHYGAQDNCDPEIPATEGTRCCRQETYIDLQGMKWAENWVLEPPGFLAYECVGSCLQ
PPEHLSLQWPHLGPRQCIASETTSLPLIVNVKEGGRTRPRVVSLPNMRVQRCSCASDGAP
VPRRLEP
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccctatggctctgctggacactgtggctgctatccctggccccgccaggggcg
gcgctgagcggggagcagatcctggccagcctgctgcagcagctgcacctccaccaggcg
cccgtcctggacagagccgacctggagggcctggccgtgcctgcccatgtgagagcccaa
tatgtggccctgctgcagcacggccacagggagcgctcccgcggcaagaggttcagccag
aacttccgagaggtggccggcaggctcctgatcaccgaggcacacacgcacctgctagtg
tttggcatggagcagcggctgccgcctaacaacgagctggtgcaggctgtgctgcggctc
ttccaggagccggtccccaaggccaccctgcgcaggcacgagcgcctgcccccgcacagc
gcccaggcccgggtcaccgtggagtggctgcgcatccgtgacgacggctccaaccacacc
tccctcatcgactccaggctggtgtccatccaccagagcggctggaaggcgttcgatgtg
acggaggccgtgaacttctggcagcagctgagggagcccaggcagccgctgctgctgcag
gtgtctgtgcagagggagcacctgggcgcgggctcgtccagcgcgcacaggctggtgcgc
tttgcctggcagggggaggctggtggtgtgtcgagcgagccgcagctggagctgcacacc
ctggacctcaagcactatggagctcaagacaactgtgaccctgagattccagcaaccgag
ggcacccgctgctgtcgccaggagacctacattgacctgcaggggatgaagtgggctgag
aactgggtcctggagccccctggcttcctggcctatgagtgtgtgggcagctgtctgcag
cctccggagcacctgagcctccagtggccacacctgggcccacgacagtgcattgcctcg
gagacgacctcgttgcctttgattgtcaacgtgaaggagggaggcaggaccaggccccgg
gtggtcagcctgcccaacatgagggtacagaggtgtagctgtgcctcagatggggcacct
gtgcccaggaggttggagccgtag
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integrated database retrieval system
