Ochotona princeps (American pika): 101529344
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Entry
101529344 CDS
T07609
Name
(RefSeq) tubulin alpha-3 chain
KO
K07374
tubulin alpha
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04145
Phagosome
opi04210
Apoptosis
opi04530
Tight junction
opi04540
Gap junction
opi04814
Motor proteins
opi05010
Alzheimer disease
opi05012
Parkinson disease
opi05014
Amyotrophic lateral sclerosis
opi05016
Huntington disease
opi05020
Prion disease
opi05022
Pathways of neurodegeneration - multiple diseases
opi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101529344
09143 Cell growth and death
04210 Apoptosis
101529344
09144 Cellular community - eukaryotes
04530 Tight junction
101529344
04540 Gap junction
101529344
09142 Cell motility
04814 Motor proteins
101529344
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101529344
09164 Neurodegenerative disease
05010 Alzheimer disease
101529344
05012 Parkinson disease
101529344
05014 Amyotrophic lateral sclerosis
101529344
05016 Huntington disease
101529344
05020 Prion disease
101529344
05022 Pathways of neurodegeneration - multiple diseases
101529344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101529344
03036 Chromosome and associated proteins [BR:
opi03036
]
101529344
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101529344
04147 Exosome [BR:
opi04147
]
101529344
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101529344
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
101529344
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
101529344
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101529344
Exosomal proteins of other body fluids (saliva and urine)
101529344
Exosomal proteins of colorectal cancer cells
101529344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin_C
Tubulin
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
101529344
NCBI-ProteinID:
XP_036352333
LinkDB
All DBs
Position
21:20729284..20857792
Genome browser
AA seq
415 aa
AA seq
DB search
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtgacaaaaccatcgggggcggcgatgactcattcaacacgttcttcagtgag
acgggggcgggcaaacacgtgcccagagcagtgtttgtggacctagagcccaccgtggtg
gatgaagtgcgcacaggcacgtacaggcagctcttccacccggagcagctgatcaccggg
aaggaggacgcggccaacaactacgccaggggccattataccatcggcaaggagattgtc
gacctggtcctggatcgcatccgcaagctggcggacctgtgcacgggcctgcaaggcttc
ctcatcttccacagctttgggggtggcaccggctccggcttcgcatctctgctcatggag
cggctgtctgtggactatggcaagaagtccaagctggagtttgccatctacccagcgccc
caggtctccacggccgtggtggagccctacaactccatcctgaccacccacacgaccctg
gagcactcggactgcgccttcatggtggacaacgaggccatctatgacatctgcaggcgc
aacctggacattgagcgtcccacgtacaccaacctcaaccggctgatcgggcagattgtg
tcgtccatcacggcctccctgcgcttcgacggggccctgaacgtggacctgacggagttc
cagaccaacctggtgccctacccccgcatccacttccctctggccacttatgccccggtc
atctcggcggagaaggcctaccacgagcagctgtctgtggccgagatcaccaacgcctgc
tttgagccggccaatcagatggtcaagtgtgaccctcgccacggcaagtacatggcctgc
tgcatgttgtaccggggtgacgtggtccccaaagatgtcaatgcggccattgccaccatc
aagaccaagcgtaccatccagtttgtggactggtgcccgactggctttaaggtgggcatt
aactaccagccccccaccgtggtgcccggcggtgacctggccaaggtgcagcgggccgtg
tgcatgctgagcaacaccacggccatcgccgaggcctgggcccgcctggaccacaagttc
gacctcatgtacgccaagcgggccttcgtgcactggtacgtgggcgaaggcatggaggaa
ggggagttctcggaggcccgggaggacctggcggctctggagaaggattacgaggaagtg
ggcgtggattccgtggaggccgaggccgaggagggggaggagtactga
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integrated database retrieval system