Ochotona princeps (American pika): 101529346
Help
Entry
101529346 CDS
T07609
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101529346 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101529346 (MYO5B)
04131 Membrane trafficking [BR:
opi04131
]
101529346 (MYO5B)
03029 Mitochondrial biogenesis [BR:
opi03029
]
101529346 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101529346 (MYO5B)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101529346 (MYO5B)
mRNA cycle factors
P-body specific factors
101529346 (MYO5B)
Membrane trafficking [BR:
opi04131
]
Others
Actin-binding proteins
Myosins
101529346 (MYO5B)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101529346 (MYO5B)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101529346 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_16
DUF3045
AAA_22
Motif
Other DBs
NCBI-GeneID:
101529346
NCBI-ProteinID:
XP_004579739
LinkDB
All DBs
Position
9:20193552..20438458
Genome browser
AA seq
1849 aa
AA seq
DB search
MSVSELYSQYTRVWIPDPDEVWCSAELTKDYKEGDKFLQLRLEDETTREYPIDVQNNQLP
FLRNPDILVGENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYG
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYF
ATVGGSASDTNIEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQADDERNYHIFYQLCAASSLPEFKELALTCAEDFFYTSQGGDTCIDGVD
DAEDFEKTRQAFTLLGVRESHQMSIFKIIASILHLGSVEIQAERDGDSCSISSQDEHLSN
FCRLLGVEQSQMEHWLCHRKLVTTSETYVKTMSLQQVVNARNALAKHIYAQLFAWIVEHI
NKALHTSLKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMK
EQIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHSSSQHFQK
PRMSNTAFIVVHFADKVEYLSDGFLEKNRDTVYEEQINILKASKFPLVADLFHDDKDPPA
ATTASGKGSSAKINIRSARPPLKTSNKEHKKTVGHQFRTSLHLLMETLNATTPHYVRCIK
PNDEKLPFHFDPKRAVQQLRACGVLETIRISAAGYPSRWAYHDFFNRYRVLVKKQELANT
DKKAICRSVLETLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWL
QRVKYRRLKGAALTLQRYCRGYLARRLAEHLRRTRAAVILQKQYRMQRARQAYQRVRQAA
IVIQAFTRGMFVRKIYHQVLTEHKATIIQKHTRGWMARRRFRRLRAAAIVIQCAFRRLKA
KRELKALKIEARSAEHLKRLNVGMENKVVQLQRKIEDQNKEFKTLSEQLSTVTSMHAVEV
EKLKKQLAHYQQSQDGDASLRLQEEVQSLRSELQKAHSELQVLEDAHSREKDQLRKRVAD
LEQENALLKDEKEQLNNQILGQSKDESTQSSMKENLMKKELEEERSRYQNLVKEYSRLEQ
RYDNLRDEMATMKQTPGHRRNPSNQSSLESDSNYPSISTSEVGDAEDALQQVEEIGLEKA
AMDMTVFLKLQKRVRELEQERKKLQVQLEKREQQDSRKVQAEQPKNDLDLDQDADLAYNS
LKRQELESENKRLKNDLNELRKAVADHAAQDNSTRSSPDGYSLLLNQLRLANEELEVRKE
EVLILRTQIVSADQRRLAGRNLEPNINARTSWPNSEKHVDQEDAIEAYHGVCQANSKTED
WGYLNEDGELGLAYQGLKQVARLLEAQLQAQSLEHEEEVERLKAQVEALKEELDRQQQTF
SQTLLLSPEAQVEFGVQQEMSRLTNENLDFRELVEKLEKNERKLKKQLKIYMKRVQDLEA
VQALAQNDRKRHELTRQVTVQRKEKDFQGMLEYHKEDEALLIRNLVTDLKPQVLSGTVPC
LPAYILYMCIRHADYTNDDVKVHSLLTSTINGIKKVLKKHNDDFEMTTFWLSNTCRLLHC
LKQYSGDEGFMTQNTAKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGLLQPMIVS
AMLENESIQGLSGVKPTGYRKRSSSMVDGDNAYCLEAIIRQMNAFHGVMCDQGLDPEIIQ
QVFKQLFYVINAVTLNNLLLRKDVCSWSTGMQLRYNISQLEEWLRGRNLHQSGAVQTLEP
LIQAAQLLQLKKKTQEDAEAICSLCTSLSTQQIVKILNLYTPLNEFEERVTVAFIRTIQA
QLQDRNDPQQLLLDFKHMFPVLFPFNPSSLTMDSIHIPACLNLEFLNEV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcagcgagctctacagccagtacacgagggtgtggatccctgaccccgatgaa
gtgtggtgctcagctgagttgaccaaggactacaaagagggagacaagttcctccagctc
agactggaagatgaaactacgcgagaataccccatcgacgtccagaacaaccagctgccc
ttcctccggaatccagatatcttggttggggagaatgacctcactgccctcagctatctc
catgagcccgcagttctgcataacttgaaggtccgcttcctggagtccaaccatatttac
acctactgtggtatcgtgcttgttgccatcaatccttatgaacagttgccaatctatgga
caagatgtcatctacgcctacagtggccagaacatgggcgacatggaccctcacatcttt
gccgtggcagaggaagcctacaagcagatggccagagatgagaaaaatcagtccatcata
gtcagcggggagtctggagctgggaagaccgtgtcggccaagtatgccatgcgctatttc
gccactgttggtggctcagccagtgacaccaacattgaagagaaggtcctagcatctagt
cctatcatggaggccattggtaatgccaaaaccactcgcaatgacaacagcagtcgtttt
gggaagtacattcagattggcttcgacaaaaggtaccacatcattggggccaacatgagg
acctatctgttggagaagtccagagtggtcttccaggcagacgacgagaggaattaccac
atcttttaccagctctgtgctgcttccagtcttccagagtttaaagagctagcactgaca
tgtgcagaggactttttctacacctcccagggaggagacacgtgcatcgacggtgtagat
gatgcagaggacttcgagaagacacggcaagccttcacactgcttggtgtgagagagtcc
catcagatgagcatcttcaagataatcgcatccatcctgcacctgggaagcgtggagatt
caggctgagcgtgatggggattcctgtagcatatcatcccaagatgaacacctgagcaac
ttctgccgcctgctgggagtggagcagagtcagatggagcactggctgtgccaccgcaag
ctggtcaccacctcggagacctacgtgaagaccatgtcccttcagcaggtggtgaatgcc
cgcaacgccctagccaagcacatctatgcccagctgttcgcctggattgtggagcacatc
aacaaggccctgcacacttccctcaaacagcactcgttcatcggtgtcctggacatctat
gggtttgagacctttgaagtgaacagctttgagcagttttgtattaactatgccaacgag
aagctccagcagcagttcaacttgcatgtgttcaaactggaacaagaagaatacatgaag
gagcagattccctggaccttgattgatttttatgacaaccaaccctgcattgacctcata
gaagccaagctggggatcctggacctgttggatgaagagtgtaaggtccctaaaggcact
gaccagaactgggcgcagaagctgtatgaccggcactccagcagccagcacttccagaag
ccacgcatgtctaacaccgccttcattgttgtgcacttcgccgacaaggtggagtatctt
tcggatggtttcctggagaaaaacagagacacggtgtacgaagagcagattaacatcctg
aaagccagcaagttcccactagtagctgacctgttccatgatgacaaggaccctcctgct
gccaccactgcttctggcaagggatcgtctgcaaagatcaacattcgctctgccagaccc
cctctgaagacctccaacaaggagcacaagaagactgtgggtcaccagtttcgcacctcc
ctgcacctgctcatggagaccttgaatgccacgacgccacactacgtccgctgcatcaag
cccaacgatgagaagctgcccttccactttgacccaaagagagcggtgcagcagctcaga
gcctgtggggtgctggagacgattcgcatcagtgcagctggctacccgtccaggtgggcc
taccatgacttcttcaaccggtaccgggtactggtcaagaagcaggagctcgccaacact
gacaagaaggccatctgcaggtccgtcctggagaccctcatcaaggaccctgacaagttc
cagtttggccgcaccaagattttcttccgggcaggccaggtggcctacctggagaagcta
cgtgctgacaagttccgggctgccaccatcatgatccagaagaccgtgcgtggctggctg
cagagggtgaagtaccgcaggctgaagggggctgccttgaccctgcagaggtactgccga
ggatacctggcccgcaggctggctgagcacctgcggaggaccagggcagccgtgatacta
cagaagcagtaccgcatgcagagggcacgtcaggcctaccagagggtccgccaggccgcc
atcgtcatccaggccttcacccggggcatgttcgtacgcaagatctaccaccaggtcctc
acagagcacaaggccaccatcatccagaagcacacgcggggctggatggcgcgcagacgt
ttccggcggctgcgagccgcggccatcgtcatccagtgtgccttccggaggctgaaggcc
aagcgggagctcaaggccctcaagatcgaggcccgatcagctgagcacctgaagcgcctc
aacgtgggcatggagaacaaggtggtgcagctgcagcgtaagatcgaagaccagaacaaa
gagttcaagaccctgtcggagcagctgtcgacggtcacctcaatgcacgccgtggaggta
gagaaactgaagaagcagctggcacactaccagcagagccaggatggggacgccagtctg
cgtctacaggaggaggtgcagagcctgcgctcggagctgcagaaggcacactcggagctc
caggtcctggaggatgcccacagcagggagaaggaccagctgagaaagcgtgtagcagat
ctagagcaagaaaacgctctcttgaaagatgagaaagaacagcttaacaaccagatcctg
ggccagtctaaagatgaatctacccagagctccatgaaggagaatctgatgaagaaggag
ctggaggaggagcggtcccggtaccagaacctggtgaaggagtactcccggctggagcag
agatatgacaacctgcgggatgagatggccactatgaagcaaaccccaggccacaggcgg
aacccgtcaaaccaaagtagcttagaatccgactccaattacccctccatctccacatct
gaggtcggagacgccgaggatgccctccagcaggtagaggagattggcctggagaaggca
gccatggacatgacggtcttcctgaagctgcagaagagagtgcgggagttggagcaggag
cggaagaagctgcaggtgcagctggagaagagagagcagcaggacagcagaaaagtccag
gcagagcaaccaaagaatgacttggatttggaccaggatgcagatctagcctacaacagt
ctgaagaggcaggagctggagtcagagaacaagaggctgaagaatgacctgaacgagctg
aggaaagccgtggctgaccacgctgcccaggacaactccactcgcagctcccctgacggt
tatagcctcctgctgaaccagctcaggctggccaacgaggagctggaggtgcgcaaggag
gaggtgctcatccttaggacacagatcgtgagtgccgaccagcgccggctggctggcagg
aacttggagcccaacattaatgccagaacaagctggcccaacagcgagaagcatgtggac
caggaagacgccattgaggcctatcacggtgtctgccaggcaaacagcaagactgaggat
tggggctatttgaatgaagatggagaactcggcctggcctaccaaggcctaaagcaagtt
gccaggttgctggaagcacaactacaggcccagagcctggagcacgaggaggaggtagag
cggctgaaggcccaggtggaagccctgaaggaggagctggaccgacagcagcagaccttc
tcgcagacactgctgctctccccagaggcccaggtggagtttggtgtccagcaggagatg
tcccggctgaccaatgagaatctggacttcagagaactggttgaaaagctggagaagaat
gagaggaagctcaagaagcagctaaagatttacatgaagcgagtccaggacctggaagct
gtgcaggcattggcccagaatgacaggaagcgccatgagctcaccaggcaggtcacagtg
cagcggaaggagaaggacttccagggcatgctggagtaccacaaggaggacgaggcactc
ctcattcggaacctggtgacagacctgaagccccaggtgctgtcgggcactgtgccctgc
ctccctgcatacatcctctacatgtgcatcagacatgcagactacaccaacgacgacgtc
aaggtgcactccctgctgacttccaccatcaacggcatcaagaaagttctcaagaagcac
aatgatgactttgagatgacaacgttctggctgtccaacacctgtcgcctccttcactgc
ttgaagcagtacagcggggatgagggcttcatgactcagaacacggcgaagcagaatgag
cactgtctgaagaactttgacctcacagagtaccgacaggtgctgagcgacctctccatc
cagatctaccagcagctcattaagattgccgagggcctactgcagcccatgatagtttct
gccatgttggagaatgagagcatccagggtctctctggcgtgaagcccacgggctaccgg
aagcgctcctccagcatggtggatggagacaacgcctactgcctggaggccatcatccgc
cagatgaatgccttccacggggtcatgtgcgaccagggcctggaccccgagatcatccag
caggtgttcaagcagctcttctatgtgatcaatgcggtgaccctcaacaacctgctcttg
cggaaagacgtgtgctcttggagcacgggcatgcaactcaggtacaacatcagccaactt
gaagagtggctgcgggggaggaaccttcaccagagtggggcagttcagaccctcgagcct
ctgatccaggcggcccagctcctgcagctgaagaagaaaactcaggaggacgcagaggcc
atctgctccttgtgtacctccctcagcacccaacagattgtcaaaatcttgaatctttat
actcccctgaatgaatttgaagaacgggtaacagtggcctttatacgaacaatccaggca
caactgcaagatcggaacgaccctcagcaattgctgttagacttcaaacacatgtttcct
gttttgtttccatttaacccatcctctctgaccatggactccattcatatcccagcttgt
ctcaacctggagttcctcaatgaagtgtga
DBGET
integrated database retrieval system
