Ochotona princeps (American pika): 101529529
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Entry
101529529 CDS
T07609
Symbol
CDH1
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04015
Rap1 signaling pathway
opi04371
Apelin signaling pathway
opi04390
Hippo signaling pathway
opi04514
Cell adhesion molecules
opi04520
Adherens junction
opi05100
Bacterial invasion of epithelial cells
opi05200
Pathways in cancer
opi05213
Endometrial cancer
opi05216
Thyroid cancer
opi05218
Melanoma
opi05219
Bladder cancer
opi05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
101529529 (CDH1)
04390 Hippo signaling pathway
101529529 (CDH1)
04371 Apelin signaling pathway
101529529 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101529529 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101529529 (CDH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101529529 (CDH1)
09162 Cancer: specific types
05226 Gastric cancer
101529529 (CDH1)
05216 Thyroid cancer
101529529 (CDH1)
05218 Melanoma
101529529 (CDH1)
05219 Bladder cancer
101529529 (CDH1)
05213 Endometrial cancer
101529529 (CDH1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101529529 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101529529 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101529529 (CDH1)
04090 CD molecules [BR:
opi04090
]
101529529 (CDH1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
101529529 (CDH1)
Cell adhesion molecules [BR:
opi04515
]
Cadherins
Major cadherins
101529529 (CDH1)
CD molecules [BR:
opi04090
]
Proteins
101529529 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
BACON_2
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
101529529
NCBI-ProteinID:
XP_004584033
LinkDB
All DBs
Position
5:37560032..37621175
Genome browser
AA seq
888 aa
AA seq
DB search
MGPLRRSLPWLLLLLLLLLQVSPWLCQEPEPCHPGFGSENYVFTVPRRHLERGRVLGRVS
FEGCTGRPRTAYFSDDSRFQVGTDGVVTVKRPLQLHNPETSFHVHAWDSSYRKLSTRVTL
KAVGRHRNHRHHHSHDSPPGTQPEVLTFPESHHGLRRQKRDWVIPPISCPENEKGPFPKN
LVQIKSNKDKETQVFYSITGQGADKPPEGVFIIERETGWLKVTEPLDREHIAKYTLFSHA
VSSNGNAVEDPMEIVISVTDQNDNRPEFTRPVFEGSVMEGALPGTSVMQVTATDADDDVN
TYNAAIAYEILSQDPELPHQNMFMINRNTGVISVVATGLDRETYPTYTLVVQAADLQGEG
LSTTAVAVITVTDINDNPPIFDPTTYVGQVPENEVNYLVATLKVTDKDAPNTAPWLAQYT
ILNDPEGQFEVTTDPVTNDGLLKTAKGLDFEAKQQYILHVSVQNVVPFEVALPTSTATVT
VDVMDVNEAPIFMPPEKKVEVPEDFGVGLEITSYTAREPDTFMQQKITYRIWRDAANWLE
INPETGTISTRAEMDREDTNYVKNSTYTAIIIATDNGSPVATGTGTLLLILSDVNDNGPV
PDPRRMDFCQRDPQPQLINIIDPDLPPNTSPFTAELTHGASVNWTIEYSDPRQESIILKP
KKTLELGDYKINLKLVDNQNKDQVTTLDVLVCDCEGTVNNCMRANYVEAGLQVPAILGIL
GGILALLILLLLLLLFVRRRAVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHR
GLDARPEVIRNDVAPTLMSMPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFD
YEGSGSEAASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDD
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgggccctctgcgccgcagcctcccttggctgctgctgctgcttctgctgttactgcag
gtctccccgtggctgtgccaggagcctgagccgtgccaccctggctttggctccgagaac
tacgtgttcaccgtgccccggcggcacttggagcgaggccgcgtcctgggcagagtgagc
tttgaaggctgcaccggccgccccaggacggcttacttctctgacgactcccggttccaa
gtgggcacggacggtgtggtcacagtcaaacggcccctgcagctgcacaacccggagacc
agctttcacgtccacgcctgggactccagctaccgaaaactgtctaccagagtcacactg
aaggctgtggggcgccaccgcaaccaccggcaccaccattcccatgattcgccccctggg
acccagccggaggtgctcacctttcccgaatcccaccatggtctcagaaggcagaagcga
gactgggtcattcctcccatcagttgcccagaaaatgaaaagggcccatttcctaaaaac
ctggttcagatcaagtccaacaaggacaaagagacccaggtgttctacagcatcaccggc
cagggagccgacaagccccccgagggtgttttcatcatcgagagggagacggggtggctg
aaggtgacagagcctctggaccgagagcacattgccaagtacactctcttctctcatgcc
gtgtcatccaatgggaatgcggtcgaggaccccatggagattgtgatatcggtaacagat
cagaacgacaacaggcccgagttcacccggcctgtcttcgagggatctgttatggagggt
gcacttccaggaacctctgtgatgcaggtcacagccacagatgctgacgatgacgtcaac
acctacaatgccgccatcgcttacgagatcctcagccaggatcccgagctgcctcaccag
aacatgtttatgatcaaccggaacacaggcgtcatcagcgtggtcgccaccggcctggac
cgagagacttaccccacgtacaccctggtggttcaggctgccgacctccaaggcgaaggg
ctcagcacaacggcagtggctgtgatcacggtcactgacatcaacgacaaccctcccatc
ttcgaccccaccacgtacgtgggccaggtgcccgagaatgaggtcaactacctggtagcc
acgcttaaggtaaccgacaaagacgcccccaacactgcaccgtggttggcccagtacacc
atattgaatgaccctgaaggccagttcgaagtcaccacggacccagtgaccaacgacggg
ctcctaaagacagccaagggtctggactttgaggccaagcagcagtatatcctccacgtg
agcgtgcagaacgtggtccccttcgaggtggctctccccacctcaacagccacagtgacc
gtggatgtgatggatgtgaatgaagctcctatcttcatgcctcctgagaagaaggtggag
gtgcccgaggactttggcgtgggcctggaaatcacgtcctacaccgcccgcgagccggac
acgttcatgcaacagaagataacgtatcggatttggagagatgctgccaactggctggag
attaatcctgagacgggtaccatctctacgcgggctgagatggaccgagaagacacaaac
tacgtgaagaacagcacctatacagccatcatcatcgccaccgacaatggttccccagtt
gctactggaacgggtaccctgctcctaatcctgtccgatgtgaatgataacgggcccgtc
cctgaccctcgtaggatggacttctgccagagggacccccagcctcagctcataaacatc
atcgaccctgacctccctcccaacacatcacccttcacagccgagctcacccatggggcc
agcgtcaactggaccatcgagtacagtgatccacgccaagagtccatcattttgaagcca
aagaagaccttagagttgggcgactacaaaatcaacctcaagctcgtggacaaccagaat
aaagaccaggtgactaccctggacgtgctcgtgtgcgactgtgaaggaaccgtcaacaac
tgcatgagggccaactacgtggaggcagggttgcaagtgcccgccatcctgggaatcctt
ggaggaatcctggctttgctaatcctgctgctgctgctgctgctctttgtgcggaggaga
gcggtggtcaaagagccgttgctgccccctgaagatgacacacgggacaacgtgtactac
tacgatgaagagggaggtggcgaggaggaccaggactttgacctgagccagttgcacaga
ggcctggatgctcggcccgaagtgatacgcaatgatgtggccccaaccctcatgagtatg
ccccagtaccggccccggcccgccaatcccgatgagattgggaacttcatcgatgagaac
ctgaaggcggccgacacagaccccacggcgccgccctacgattccctgctcgtgtttgac
tatgagggcagcggctctgaagccgcctccctaagttccctcaactcctccgagtctgac
caggaccaggactacgactacctgaacgagtggggcaaccgcttcaagaagttggctgac
atgtacggcggcggcgaggacgactag
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