Ochotona princeps (American pika): 101529533
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Entry
101529533 CDS
T07609
Symbol
NOVA1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X1
KO
K14944
RNA-binding protein Nova
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101529533 (NOVA1)
Spliceosome [BR:
opi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101529533 (NOVA1)
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
101529533
NCBI-ProteinID:
XP_004584790
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All DBs
Position
17:41214514..41351348
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AA seq
507 aa
AA seq
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MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYA
AGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKI
REMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPN
STAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQK
IQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAF
PAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAAN
LLATYASEASASGSTAGGTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGS
KDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAA
TQAAQYLITQRITYEQGVRAANPQKVG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcagctcctatccagcagaacgggacccacactggggttcccatagacctg
gacccgccggactcgcggaaaaggccgctggaagccccccctgaagccggcagcaccaag
aggaccaatacgggcgaagacggccagtattttctaaaggttctgatacctagttatgct
gctggatctataatcggaaagggaggacagacaattgttcagttgcaaaaagaaactgga
gccaccatcaagctgtctaagtccaaagatttttatccaggtactactgagagagtgtgc
ttgatccagggaacagtggaagcactcaatgccgttcatggattcattgcagaaaaaatt
cgagaaatgccccaaaatgtggctaaaacagaaccagtcagcattttacaaccccagacc
accgttaacccagatcgcatcaaacaaacattgccatcttccccaactaccaccaagtcc
tctccatctgatcccatgaccacctccagagctaatcaggtaaagattatagttcccaac
agcacagcaggtctgataatagggaagggaggtgctactgtgaaggctataatggagcag
tcaggggcttgggtgcagctttcccagaaacctgatgggatcaacttgcaagagagggtt
gtcactgtgagtggagaacctgaacaaaaccgaaaagctgttgaacttatcatccagaag
atacaagaggatccgcagagtggcagctgtctcaatatcagttatgccaatgtgacaggt
ccagtggcaaattccaatccaaccggatctccttatgcaaacactgctgaagtgttacca
actgctgcggcagctgcagggttattaggacatgctaaccttgctggcgttgcagccttt
ccagcagttttatctggcttcacaggcaatgacctggtggccatcacctctgcacttaat
acattagccagctatggatataatctcaacacattagggttaggcctcagtcaagcagca
gcaacaggggctttggctgcagcagctgccagtgccaacccagcagcagcagcagccaat
ttgttggccacctatgccagtgaagcctcagccagtggcagcacagcgggcggtacggcg
gggacattcgcattaggtagcctggctgctgctactgctgcaaccaatggatattttgga
gctgcttctcccctagctgccagtgccattctaggaacagaaaaatccacagatggatca
aaggatgtagtggaaatagcagtgccagaaaacttagttggtgcaatacttggcaaagga
gggaaaacattagtggaataccaggagttgactggtgcaaggatacagatctccaaaaaa
ggggaattcgtacctggcacaaggaatcggaaggtaaccattactggaacaccagctgcg
acacaggctgctcagtatttaattacacagaggatcacatatgagcaaggagttcgagct
gccaatcctcagaaagtgggttga
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