Ochotona princeps (American pika): 101529984
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Entry
101529984 CDS
T07609
Symbol
DTX1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
101529984 (DTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101529984 (DTX1)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101529984 (DTX1)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101529984 (DTX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf-ANAPC11
zf-UDP
Motif
Other DBs
NCBI-GeneID:
101529984
NCBI-ProteinID:
XP_004595343
LinkDB
All DBs
Position
21:3887925..3911390
Genome browser
AA seq
625 aa
AA seq
DB search
MSRPGQGMMVPVSGLGFPPQNVARVVVWEWLNEYSRWRPYTATVCHHIENVLKEDARGSV
VLGQVDTQLVPYIIDLQSMHQFRQDTGTMRPVRRNFYDPSSAPGKGIVWEWENDSGAWTA
YDMDICITIQNAYEKQHPWLDLSSLGFCYLIYFNSMSQMNRQTRRRRRLRRRLDLAYPLT
VGSIPKSQSWPVGASSGQPCSCQQCLLVNSTRAASNAILASQRRKATPAPAPPPLPPPPP
PPPGGPQGTLAVRPSATFAGAALWAAPATGPPEPAPPPTGPPRSPSAPSGAPVPGQNNLN
RPGPQRSTGVSARASIPPGVPALPVKNLNGTGPVHPALAGMTGILLCAAGLPVCLTRAPK
PILHPPPVSKSDVKPVPGVPGVCRKTKKKHLKKSKNPEDVVRRYMQKVKNPPDEDCTICM
ERLVTASGYEGVLRHKGVRPELVGRLGRCGHMYHLLCLVAMYSNGNKDGSLQCPTCKAIY
GEKTGTQPPGKMEFHLIPHSLPGFADTQTIRIVYDIPTGIQGPEHPNPGKKFTARGFPRH
CYLPNNEKGRKVLRLLITAWERRLIFTIGTSNTTGESDTVVWNEIHHKTEFGSNLTGHGY
PDASYLDNVLAELTAQGVSEAAAKA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggccaggccagggcatgatggtcccagtgtccgggctgggcttccccccgcag
aatgtggcccgggtggtggtgtgggagtggctaaatgaatacagccgctggcgtccctac
acggccaccgtgtgccaccacatcgagaatgtgctcaaggaggatgcccggggctcggtg
gtcctgggccaggtggacacccagctggtgccctacatcatcgacctgcagtccatgcac
cagtttcgccaagacacaggcaccatgcgaccggtgcgacgcaacttctacgacccgtcg
tcggcgcccggcaaggggatcgtgtgggagtgggagaacgacagcggcgcgtggacggcc
tacgacatggacatctgcatcaccatccagaacgcctacgagaagcaacacccgtggctc
gacctctcctcgctcggcttctgctacctcatctacttcaacagcatgtcgcagatgaac
cgccaaacgcgccgccgccgccgcctgcgccgccgcctggacctagcctatccgctcacg
gtcggctccatccccaagtcgcagtcgtggcccgtgggcgccagctcgggccagccctgt
tcgtgtcagcagtgcctgctggttaacagcacgcgcgccgcctccaacgccatcctggcc
tctcagcgccgcaaggcgacccctgcgcccgcgcccccgccgctgccgccaccaccgccg
ccgcctcctggaggacctcagggcacgctcgctgtgcgccccagcgccaccttcgccggc
gctgcgctctgggccgcgcctgccaccggtccccctgagcccgcaccgcctcccacggga
cccccgaggagcccaagcgcccccagcggcgcgccggtccccgggcagaacaacctcaac
cggccgggaccccagcgttccacaggcgtgagcgcgcgcgcctccatcccgcctggggta
cccgcgctcccggtgaagaatttgaacggtaccgggccggtccacccggccctggcaggc
atgaccgggatcctgttgtgcgccgcggggctgcccgtgtgcctgacgcgcgcgcccaag
cccatcctgcacccgccgcccgtgagcaagagcgacgtgaagccagtgcctggcgtgccc
ggagtgtgccgcaagaccaagaagaagcacctcaagaagagtaagaacccagaggatgtg
gttcggcgatacatgcagaaggtcaagaacccacctgatgaggactgcaccatctgtatg
gagcgactggtcacagcctcgggctacgagggtgtgctccggcacaagggtgtgcggccg
gagctggtgggccgtctgggccgctgcggccacatgtaccacctgctgtgcctagtggcc
atgtactccaatggcaacaaggatggcagcttgcagtgtcccacgtgcaaggccatctat
ggtgagaagacgggcacacagcctccggggaagatggagttccacctcatcccccactcg
ctgccaggctttgcggacactcagaccatccgcatcgtctatgacatccccacgggcatc
cagggccccgagcaccccaacccgggtaagaagttcacggccagaggtttcccacgccac
tgctacctgcccaacaatgagaaggggcgcaaggtgctgcggctgctcatcacagcctgg
gagcgtagacttatcttcaccatcggcacatccaacaccacgggcgagtcggacaccgtg
gtgtggaacgagatccaccacaagacggaattcggctccaacctgacaggccacggctac
cctgacgccagctacctggacaacgtgctggctgagctcacggcccagggtgtctccgag
gcagcggccaaggcctga
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