Ochotona princeps (American pika): 101530119
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Entry
101530119 CDS
T07609
Symbol
NKX2-5
Name
(RefSeq) homeobox protein Nkx-2.5
KO
K09345
homeobox protein Nkx-2.5
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101530119 (NKX2-5)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
101530119 (NKX2-5)
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Paralog
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
101530119
NCBI-ProteinID:
XP_004587472
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Position
3A:4990254..4992679
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AA seq
332 aa
AA seq
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MFPSPALTPTPFSVKDILNLEQQQQQRSLATAGELPSRLEATLAPASCMLAAFKSEAYAG
PETAAAPGLPEMRAELGPAPSLGKCAPAFPAAPAFYPRAYGDPDQAKDPRADKKELCALQ
KAAELEKPEADGAERPRARRRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKL
TSTQVKIWFQNRRYKCKRQRQDQTLELVGLPPPPPPPARRIAVPVLVRDGKPCLGDSAPY
APAYGVGLNAYGYNAYPAYPGYGSATCSPGYSCAAAYPAGPPAAQPAAAAAAAAAANNNF
VNFGVGDLNAVQSPGIPQGNSGVSTLHGIRAW
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgttccccagccctgcgctcacacccacgccgttctcggtcaaagacattctgaacctg
gagcagcagcagcagcagcgcagcctggccaccgccggggagctcccttcgcgcctggag
gccaccctggcgcccgcctcctgcatgctggccgccttcaagtctgaggcctacgcgggg
ccagagacagcggccgcacccggactccccgagatgcgagccgagctggggccagctcct
tcgctgggcaagtgcgcgcctgccttccccgcagcccctgctttctatccgcgtgcctat
ggcgacccggaccaggccaaggacccgcgcgcagataagaaagagctgtgcgctctgcag
aaggcggcggagctggagaagcccgaggcggacggcgcggagcgaccccgggcgcggcgc
cggcggaagccccgcgtgctcttctctcaggcgcaagtctacgagctggagcgacgcttc
aagcagcagcggtacctgtcggctccagagcgcgaccagctggccagcgtgctgaagctc
acgtccacgcaggtcaagatctggttccagaaccggcgctacaaatgcaagcggcagcgg
caggatcagactctggagctagtggggctgcccccgcccccgccgccgcctgcccgcagg
atcgccgtgccggtgctggtgcgcgacggcaagccttgtctgggggactcggcgccctac
gcgcccgcctacggcgtgggcctgaacgcctatggttataacgcctacccggcgtacccg
ggctatgggagtgcgacttgcagtcccggctatagctgcgccgccgcttaccccgccggg
cctccagctgcacagccagccgccgcagccgccgccgccgctgcggccaacaacaacttc
gtgaactttggcgtcggggacttgaacgcggtgcagagccccgggatcccgcagggcaac
tccggagtgtccacgctgcacggtatccgagcctggtag
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