Ochotona princeps (American pika): 101530155
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Entry
101530155 CDS
T07609
Symbol
IRX1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101530155 (IRX1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
101530155 (IRX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
101530155
NCBI-ProteinID:
XP_004597954
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Position
11:complement(37691191..37695862)
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AA seq
479 aa
AA seq
DB search
MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGAAELGAGAGAAAVTSV
LGMYAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTAPAYYPYG
QFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANA
RRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKVEDDEEIDLESIDIDTIGDHDGDQS
NEDDEEKAEGPLAPVAPSALTRDQDSPLAAPDVLKPQDSLLGLAKEAREPGSTLLLSPGA
GAGGLQGAQHSKPKIWSLAETATSPDGAPKSSPPPASHAGAHGPPTGAPLQHPAFLPSHG
LYTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVGAPHAASHGPHLPPPPPQPQPPLAFTTG
ALQGEKASARSSPALPERDLVSRPDSPAPQLKSPFQPVRDNSLAPQEGTPRVLTALPSA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagttgggttacccgcagtacctgagcgccgcggggcccggagcttac
ggcggtgagcgccccggggtgctggctgcagcggcggccgctgcggccgctgcctcgtca
ggccggccaggggccgcggagctaggcgcgggcgccggcgcggctgccgtcacctcggtc
ctgggcatgtacgcggccggaccttacgcgggcgctcccaattacagcgccttcctgccc
tacgccgcggacctcagcctcttctcgcagatgggctcccagtatgagctcaaggacaac
cctggagtgcacccagccaccttcgcagcgcacacagcgccagcctattacccctatggc
cagttccagtacggggatccggggcggcccaagaacgccacgcgcgagagcaccagcacg
ttgaaggcctggctcaacgagcaccgcaagaacccgtacccaaccaagggcgagaagatc
atgctggccatcatcaccaagatgaccctcacgcaggtctccacctggttcgccaacgcg
cggcggcgcctcaagaaggagaacaaggtgacgtggggtgcgcgcagcaaggatcaggag
gacggtgccctcttcggcagcgacaccgagggtgaccctgagaaggtagaggacgacgag
gagatagatctggaaagcattgacatcgacacgatcggcgaccacgacggcgatcagagc
aacgaggatgatgaggagaaggccgaggggccgctcgccccagtcgcgccatcggccctc
acccgggaccaggactcgcccctggcagcccccgacgtcctcaagccccaagactctctt
ttgggactggccaaagaagcccgagaacctggcagcactctcctgctgagccctggagct
ggggcgggaggtctgcagggcgcccagcacagcaagcccaagatctggtccctggcagaa
accgccacgagccctgatggcgcgcccaagtcctctccacctcctgcgagccacgccggc
gcgcatgggcctcctacaggcgcacctctgcagcaccccgccttcctgcccagccacgga
ctctacacttgtcatatcggcaagttctccaactggaccaacggcgctttcctcgcgcaa
ggctctttgctcaacatgcgctccttcttgggcgtaggcgcgcctcacgccgcgtcccac
ggtccgcacctgcccccgccgccacctcagccacaacctccgctggccttcaccaccgga
gcactacagggcgaaaaggcctctgcccgcagcagccccgcgcttccagagagagacctt
gtttccaggccggactccccagcgccccagctaaagtcgcccttccagccggtgcgcgac
aactcgctggctccgcaggagggaacgccgcgcgtcctcacggccctcccgtccgcctga
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