Ochotona princeps (American pika): 101530170
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Entry
101530170 CDS
T07609
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101530170 (SLIT2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
opi00536
]
101530170 (SLIT2)
Glycosaminoglycan binding proteins [BR:
opi00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101530170 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
LRR_14
EGF_TEN
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_3
Motif
Other DBs
NCBI-GeneID:
101530170
NCBI-ProteinID:
XP_004579242
LinkDB
All DBs
Position
2A:9774689..10110671
Genome browser
AA seq
1542 aa
AA seq
DB search
MRAVGWQTLPLSLGFVLAILSEVAPQACPAQCSCSGSTVDCHGLALRSVPRNIPRNTERL
DLNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPE
LLFLGASKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVL
TLNNNNITRLSVASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPS
HLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPT
NLPETITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLY
GNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTF
APLRAIQTMHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKF
RCSAKEQYFIPGTEDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPEHIPQYTA
ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEMLLTSNRLEN
VHHKMFKGLESLKTLMLRSNRISCIGNDSFIGLGSVRLLSLYDNQITTIAPGAFDTLHSL
STLNLLANPFNCNCYLAWLGEWLRRKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGN
DDNSCSPLYRCPTECTCLDTVVRCSNKGLKILPKGIPRDVTELYLDGNQITLVPKELSNY
KHLTLIDLSNNRISTLSNQSFSNMSQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND
ISAVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKL
LLTTPSKKFTCQGPVDVNILAKCNPCLSNPCKNDGTCNDDPVDFYRCTCPYGFKGQDCDI
PIHACISNPCKHGGTCHLKEGEKDGFWCICADGFEGENCEINVDDCEDNDCENNSTCVDG
INNYTCLCPPEYTAANLNEVEKGELCEEKLDFCAQDLNPCQHNSKCILTPKGYKCDCTPG
YVGEHCDIDLDDCQENKCRNGAHCTDAVNGYTCTCPEGYSGLFCEFSPPMVLPRTSPCDN
FDCQNGAQCIVRINEPICQCLPGYQGEKCEKLVSVNFVNKESYLQIPSAKVRPQTNITLQ
IATDEDSGILLYKGDKDHIAVELYRGRVRASYDTGSHPAAAIYSVETINDGNFHIVELLA
LDQSLSLSVDGGSPKVITNLSKQSTLNFDSPLYVGGMPGRSSVASLRQAPGQNGTSFHGC
IRNLYINSELQDFRKVPMQTGILPGCEPCHKKVCAHGVCRPSSHSGFTCECEEGWMGPLC
DQQTNDPCIRNKCVHGACLPINAFSYSCKCLEGHGGVLCDEEEDLFNPCQAIKCKHGKCR
LSGLGQPYCECSSGYTGDSCDREISCRGERVRDYYQRQRGYAACQTTKKVSRLECKGGCA
GGQCCAPLRSKRRKYAFECTDGSSFVEELEKVVKCGCARCAS
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgttggctggcagacgctgcccctgtcgctggggttcgtgctggcgatcctg
agcgaggtggcgccacaggcgtgccccgcgcagtgctcctgctccggcagcacggtggac
tgtcacgggctggcgctgcgcagcgtgcccaggaacatcccccgcaacaccgagcgactg
gatttgaatggaaataacatcacacggatcacgaagacagattttgctggtcttagacac
ctaagagttctgcagcttatggagaataagattagcaccattgagaggggagcattccag
gatcttaaagaactggagagattgcgtttaaacagaaatcaccttcagctgtttcctgag
ctgctgtttcttggggcttcgaagctgtacaggcttgatctcagtgaaaatcagattcag
gcaattcccaggaaggctttccgtggagcagttgacattaaaaacttgcagctggattac
aaccagatcagctgcattgaagatggggcatttagggctctccgggacctggaagtgctc
actctcaacaataacaacattactagactttctgtggcaagcttcaaccatatgcccaaa
cttaggacttttcgactccattcaaacaacctgtattgtgactgccatctggcctggctg
tctgactggcttcgccaaagacctcgagtgggcttgtacacccagtgtatgggcccttcc
cacctgagaggccataacgtagctgaggttcaaaaacgagaatttgtctgcagtgatgag
gaagaaggtcaccagtcatttatggctccttcttgtagcgtgctgcactgccctgctgcc
tgcacctgcagcaacaatatagttgattgtcgtggcaaagggctcactgagatccccacc
aacctgccagagaccatcacggaaatacgtttggaacagaattcaatcaaggtcatccct
cctggagctttctcaccatacaaaaaacttcggagaattgacctgagcaataatcagatc
tctgaacttgcgccagatgctttccaaggactccggtctctgaattcacttgtcctgtat
ggaaacaaaattacagaacttccaaaaagtttatttgaaggactattttccttacagcta
ctattattgaatgccaacaagataaactgccttcgggtagatgcttttcaggatctccac
aacttgaaccttctctccttgtatgacaacaagcttcagaccatcgccaaggggaccttt
gctcctctccgggccattcaaactatgcatctggcccagaaccccttcatttgtgactgc
catctgaagtggctggcggattatctccataccaacccgattgagaccagtggtgcccgc
tgcaccagcccccgccgtctggcaaacaaaagaatcggacagatcaaaagcaagaaattc
cgttgttcagctaaagaacagtatttcattccaggtacagaagattaccggtcaaagcta
agtggagactgctttgcagacttggcctgccctgaaaagtgccgctgtgaagggaccaca
gtagactgctccaatcaaaaactcaacaaaatcccagagcacattccccagtacactgca
gaactgcgtcttaataataatgaattcacagttttggaagctacaggaatctttaagaaa
cttcctcagttacggaaaatcaacttcagcaacaataagatcacagatattgaggaggga
gcctttgaaggggcgtctggtgtcaatgaaatgctcctcaccagtaaccgtctggaaaat
gtgcatcacaagatgttcaaggggttggaaagcctcaaaacactgatgctgagaagcaac
cgaataagctgtattggaaatgacagttttataggactcggttctgtgcgtttgctttct
ttatatgataatcaaatcactacaattgcaccaggggcatttgataccctccattcttta
tcaactctaaacctcttggccaatccttttaactgtaactgctacctggcgtggctggga
gagtggctccggagaaaaagaattgtcacagggaatcctcgctgccaaaaaccatacttc
ctcaaagaaatccccatccaagacgtggccattcaggacttcacttgtgatgatggaaat
gatgataacagttgttccccgctttatcgctgtcctactgaatgtacctgcctggatacc
gtagttcgatgtagcaacaagggcttaaagatcctgccaaaaggcattccgagagatgtc
acagagttgtatctggatggaaatcaaattacattggttcccaaggaactctctaactac
aaacatttaacacttatagatttaagtaacaacagaataagtaccctttccaatcagagc
ttcagcaacatgagccagctcctgaccctaattcttagttacaaccgtctgcgatgtatt
ccccctcgaaccttcgatggcctgaaatctctccggctactttctctacatggaaatgac
atttctgccgtgcctgaaggggccttcaacgatctttctgcattatcacacctagcgatt
ggagccaaccctctttactgtgattgtaacatgcagtggttgtccgactgggtcaagtcg
gaatataaggagcccggaatcgctcgctgcgctggtcctggagaaatggcagataagctg
ctcctcacaacgccctccaaaaaatttacatgccaaggtcctgttgatgtcaatattctc
gctaaatgtaatccctgcctgtcaaacccatgtaaaaatgatggcacctgcaatgatgac
cctgttgacttttatcgatgcacctgtccgtatggattcaaggggcaagactgtgatatt
cccattcatgcctgcatcagcaacccatgtaagcacggaggcacctgccacttaaaagaa
ggagagaaagatggattctggtgtatttgtgctgatggatttgaaggggaaaactgtgaa
atcaatgttgatgattgtgaagataatgactgtgaaaataattctacgtgtgttgatgga
attaataactacacctgcctttgcccacctgaatacacagctgctaatctgaatgaggtg
gaaaaaggcgagctgtgtgaggaaaagctcgacttctgtgcccaagacctcaacccatgc
cagcacaactcgaagtgcatcctgacgccaaagggctacaagtgtgactgcactccggga
tacgtaggcgaacactgtgacatagacttggacgactgccaggaaaacaagtgcagaaac
ggtgctcactgcacggatgcagtgaatggctacacgtgcacctgccctgaagggtacagt
ggcttgttctgcgagttctctccgcccatggtcctccctcgtacaagcccttgcgataat
tttgattgtcagaatggagctcagtgcatcgtcaggataaacgagccaatatgtcagtgt
ttgccgggttaccagggagagaaatgtgaaaaactggtcagcgtgaattttgtaaacaaa
gagtcttatcttcaaatcccttcagccaaggttcggcctcagacaaacatcacacttcag
attgccaccgatgaagacagcggcatcctcttgtacaaaggtgacaaggaccacatcgcc
gtggagctctaccggggccgtgtgcgtgccagctacgacaccggctcgcacccggctgct
gccatttacagtgtggagacaatcaatgacgggaacttccacatcgtggagctgcttgcc
ctggatcagagtctctcgctctccgtggacggggggagccccaaagtcatcaccaacctg
tcaaagcagtccactctgaattttgactccccactctacgtaggaggaatgcccgggaga
agcagtgtggcatccttacgccaggcccctggccagaatgggaccagcttccatggctgc
atccggaacctttacatcaacagtgaactgcaggacttccgaaaagtgcccatgcaaaca
ggcatcctgccgggctgtgagccatgccacaagaaggtgtgtgcccatggcgtgtgccgg
cccagcagtcactctggcttcacctgcgagtgtgaggaaggatggatgggacccctctgt
gaccagcagaccaatgacccttgtattagaaacaaatgtgtgcacggcgcctgcttgccc
atcaatgcattctcctacagttgcaaatgcctcgagggccatggaggcgtcctctgtgat
gaggaagaagatctttttaacccatgccaggccatcaaatgcaagcacggcaagtgcagg
ctttccggacttggccagccctactgcgaatgcagcagcggctacactggcgacagctgc
gatcgagaaatctcctgtcgaggggagcgtgtacgggattactaccagagacagcggggc
tacgcagcctgccagacgaccaagaaggtgtcacgtttggagtgcaagggcggctgcgct
gggggacagtgctgtgcgcctctgcggagcaagaggaggaaatacgctttcgaatgcacg
gacggctcctccttcgtggaagagctggagaaggtggtcaagtgcggctgcgcgaggtgt
gcgtcctaa
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integrated database retrieval system
