Ochotona princeps (American pika): 101530304
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Entry
101530304 CDS
T07609
Symbol
UBE3B
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101530304 (UBE3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101530304 (UBE3B)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101530304 (UBE3B)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
HECT type E3
101530304 (UBE3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
101530304
NCBI-ProteinID:
XP_004591979
LinkDB
All DBs
Position
21:13193776..13231843
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AA seq
1073 aa
AA seq
DB search
MFTVSQTSRAWFIDRARQAREERLVQKERERAVLAIQAHVRSFLCRRRLQKDIRREIDEV
FKADDAGSSKRSALCIFKVARKLLFLFRIKEDNERFEKLCRSILNSMDAESEPKAWYVSL
ALSKDLTLLWIKQIKDILWYCCMFLEQLKPEILQDSRLITLYLTMLVTFTDTATWKILRG
KGESLRPAMNHMCANIMGHLNQRGFYPVLQVLLTRGLARPRPCLSTGMLTAAFSLALRPV
IAAQFSDNLLRPFLIHIMAVPALVTHLSTVTPERLTVLESHDMFRKFILFLRDKDRCRDV
CESLEGCHTLCLMGNLLQLGSLSPRVLEEETDGFVSVLTQMLCYCQKYVSQKKSNLTHWH
PVLGWFSQSVDYGLNESMHLITKQLQFLWGVPLIRIFFKDILSKKLLENQEPAHTQPPPA
TTTSPQNVLPMKSLLKRAFQKSASVRNILRPVGGKRVDSAEVQKVCNICVLYQTSLTTLT
QIRLQILTGLTYLDDLLPKLWAFICELGPHGGLRLFLECLNTDTEDSKPLLSMLMLFCDC
SRHLITILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVETAKGETLELFHSVH
GWLMVLYERDCRRRFAPEDHWLRKDLKPSVLHQELDKDRKRAQLILQYIPHVIPHKNRVL
LFRNMVTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFV
SDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYVHENYLQLF
EFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKR
YDGDISDLGLTLSYDEDVMGQLVCHELIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQ
TAALISGFRSVIRPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIW
LWDILASDFTPNERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVL
RGFFTIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTGFELS
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgtgtctcagacctcaagagcatggttcatcgaccgggcccgacaggcacga
gaggaacggctggtgcagaaggagcgggaacgcgctgtcctagcgatccaagctcacgtg
cggagtttcctctgccggcgtcgcctgcagaaagacatcaggagagagatcgatgaggtt
tttaaagcagatgatgctgggagcagtaaaagaagtgcactttgtatttttaaggttgcc
aggaagctgctgttcttattcagaattaaagaggataacgagagatttgagaagttgtgt
cgcagcatcctgaacagcatggatgccgagagcgaacccaaggcgtggtacgtgtccttg
gctctttccaaggatctcaccctcctgtggattaaacagatcaaggacattctgtggtat
tgctgtatgtttcttgagcagctcaagcctgaaatcttgcaagactccagactcatcacc
ctgtacctcaccatgcttgtcaccttcactgacaccgcaacgtggaaaattctgcgggga
aaaggcgagagccttcggccagccatgaaccacatgtgtgcaaatataatgggacacctc
aaccagcgtgggttttaccctgtgctgcaggtgttgttaacacgaggcctggcgagacca
cggccttgcctatccacaggcatgttgacagcggccttctccctggcactacgccctgtg
attgctgcccagttttcggacaatctgcttcgaccattcctcatccacatcatggctgtg
cctgctctcgtcacccacctcagcacagtgaccccggagcgtctcactgttttagaatct
catgacatgtttcgtaagttcatcctgttcctaagagacaaggatcggtgccgtgatgta
tgtgaaagtttagagggatgccataccctttgtctaatgggcaacctcctgcagctgggc
tcactcagcccccgcgtgctggaggaggagacggatgggtttgtaagtgtgctcacccag
atgctgtgctactgccagaagtatgtgtcacagaagaagtccaacctgacgcattggcac
cccgtccttggctggttctcccagtctgtggattacggcctcaacgagtcaatgcacttg
atcaccaaacaactgcagttcttgtggggggtgcccctcatccgcatcttcttcaaagac
atcctgagcaagaaactgctggagaaccaggagcctgcccacacacagcctccgccagct
acaacaacatcgccgcagaacgtgcttccgatgaagagcctcctgaagcgtgcatttcag
aagtctgcatcggtccgcaacatcctcaggcctgtcgggggcaagcgcgtcgattctgcc
gaggtacagaaggtctgtaacatctgtgtcctctaccagacctcgctgacgacgctcacc
cagatccgcctgcagatcctcacaggtctcacttaccttgatgacctgctgcccaaactg
tgggcattcatctgtgagctggggccccacggagggctcaggctcttcctggaatgccta
aacacagacaccgaggactccaagccactcttatccatgctgatgctgttctgtgactgt
tcccggcacctcatcacgatcctcgatgacattgaagtttatgaagagcagatctcattc
aagctggaagagctggtcaccatctcctctttcctgaattcctttgtgtttaagatgatc
tgggatggcatcgtagagaccgccaagggcgagaccctggagctgttccactctgtccat
gggtggctgatggtgctgtacgagcgggactgccggcggcgcttcgcccccgaggaccac
tggctgcgcaaggatctcaaacccagtgtgctccaccaggaactcgacaaggacaggaag
cgggcccagctgatcctgcagtacatacctcacgtcattcctcacaagaacagagtcctc
ctgttccgcaacatggttaccaaggagaaggagaagctggggcttgtggaaaccagctct
gcctccccacacgtcactcacatcaccatccgccggtcccggatgctggaggacggctat
gagcagcttcgacagctctcccagcacgccatgaaaggtgtgatccgtgtcaagtttgtc
agtgacctcggggtggacgaggcgggcatcgaccaagacggcgtcttcaaggagttcttg
gaggagattattaagagggtcttcgacccagcactcaacctgttcaagacaaccagtggg
gacgagaggctgtacccttcgcccacatcctatgtccatgagaattacctgcagctcttt
gagtttgtgggcaagatgctggggaaggctgtatatgagggcatcgtagtggacgtgccc
ttcgcctccttcttcctgagccagctgctcgggcaccaccacagtgtcttctacagctcc
gtggacgagcttccttctctggactcagagttttataaaaacctcacctccatcaagcgc
tatgacggagacatctctgacttgggcctgacgttgtcttacgacgaggacgtcatgggc
cagcttgtgtgtcatgaattgattcctggaggaaaaaccatccctgtcacaaatgaaaat
aaaattagctacatccatctgatggctcattttcgaatgcatactcaaataaaaaaccag
acagctgcactcattagtgggttccgctctgtcatcagacccgagtggatccggatgttc
tcgacccctgagctgcagcggctcatctctggcgacaatgctgaaattgacctggaagat
ttaaagaagcacactgtgtactacggcggttttcacgggagccacagggtcatcatctgg
ctctgggatatcctggcctctgacttcacgcctaatgagagagccatgttcctgaagttt
gtgacgagctgctccaggcccccgctgctgggattcgcctacctcaagcctcccttctcc
atccgctgcgtggaagtatcggatgatcaggacactggggacaccctgggcagcgtcctt
cggggcttcttcactattcgcaagcgggagccgggcggccggctgcccacctcatccacc
tgcttcaacctgctcaagctgcccaactacagcaagaagagcgtgctccgggagaagctg
cgctatgccatcagcatgaacacgggctttgagctctcctag
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