Ochotona princeps (American pika): 101530372
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Entry
101530372 CDS
T07609
Symbol
NR3C1
Name
(RefSeq) glucocorticoid receptor isoform X1
KO
K05771
glucocorticoid receptor
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101530372 (NR3C1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101530372 (NR3C1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
opi03310
]
101530372 (NR3C1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
101530372 (NR3C1)
Nuclear receptors [BR:
opi03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
101530372 (NR3C1)
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Gene cluster
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
101530372
NCBI-ProteinID:
XP_004586570
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Position
3A:29277434..29383621
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AA seq
771 aa
AA seq
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MDPKGSLTSPSRDEARSSMLGPERGNVMGFYKTLRGGATVKVSASSSLAAAAAQPDSKQQ
RLLVDFPKGSAGNAQQPDLSRAVSLSMGLYMGETEAKGMGSDLAFPQQGQTGLCSGESDL
RLLEESIANLSRSAAVPENARSAASAALPEEFPRARPEVSSERPAPKGQAGTSGGGVKLH
PVEQSAFDILQGLEFAGSPGKNTSESPWKSDLLEDENCLLSPLAGEDAAFLLEGNSNEDC
KPLIFPDTKPEIKDNGDPILSNSSSMPLPQVKTEKEDFIELCTPGVIKQEKLGPVYCQAS
FSGANTIGNKVSAISVHGVSTSGGQMYHYDMNGATLSQQQEQKPVFNVIPPIPVTSENWN
RCQGSGDDSLTSLGTVNFPGRPVFSNGYSSPGMRPDVSSPPSTTAAAPGPPPKLCLVCSD
EASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCLQAGM
NLEARKTKKKIKGIQQATTGVAQETCENPSNKTIVPATLPQLTPTLVSLLEVIEPEVLYA
GYDSSLPDTTWRIMTTLNMLGGRQVVAAVKWAKAIPGFRNLHLDDQMTLLQYSWMFLMAF
ALGWRSYKQSSANLLCFAPDLIINEERMSLPCMYEQCRHMLFVSSELKRLQVSYEEYLCM
KTLLLLSTVPKEGLKSQELFDEIRMTYIKELGKAIVKREGNSSQNWQRFYQLTKLLDSMH
EVVENLLHYCFQTFLDKTMSIEFPEMLAEIITNQIPKYSNGNVKKLLFHQK
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaagggatccttaacttcccccagtagagatgaagcccgcagtagcatgctg
ggtccggagcgaggaaatgtgatgggcttctataaaaccctcaggggaggagctactgtg
aaggtgtccgcatcttcctcgctggctgctgcggctgctcagccggactccaagcagcag
agacttttggtggattttccgaaaggctcagcaggcaatgcccagcagccagacctgtcc
agggcagtttcactctcgatgggactgtatatgggcgagacagaagcaaaagggatgggc
agtgacctggcattcccacagcagggtcaaaccggcctttgctcgggggagagcgatctt
cggctcctggaggaaagcatcgcgaacctcagtaggtcggccgctgtcccggagaacgcc
cgcagtgcagcctccgccgccttgccagaggagtttcccagagcgcgccccgaggtttct
tcagaacggccagctccgaagggccaggccggcaccagcggcgggggtgtgaagttgcac
ccggtcgagcaaagcgcctttgacattctgcaaggtttggagtttgctgggtccccgggg
aaaaacaccagtgagagtccttggaagtcagacctgttggaggacgagaactgtttgctt
tctcccctggctggagaagacgctgcgttccttttggaaggaaactccaatgaggactgc
aagcctcttatttttccggacacgaaacctgaaattaaggataatggagatccgatttta
tcaaactccagcagcatgccactgccccaagtgaaaacagaaaaagaagatttcattgaa
ctctgcacccctggggtaattaagcaggagaaactgggcccagtttactgccaagcgagt
ttttctggggcaaatacaattggtaataaagtgtcggccatctctgttcacggtgtgagc
acctctggagggcagatgtaccactacgacatgaacggagcaacgctttctcagcagcag
gagcagaagcccgtttttaatgtcatcccaccaattcctgtgacttcagagaattggaat
cggtgccaagggtctggagatgacagcttgacgtccttggggactgtgaatttccctggt
cggcccgttttctctaatggctactccagcccaggaatgagaccagatgtgagctctcct
ccatcgaccaccgccgcagccccgggaccacctcccaaactctgcctggtgtgctccgat
gaagcttcgggatgccattatggggtcttgacttgtggaagctgcaaagtattcttcaaa
agagcagtggaaggacagcacaattatctttgtgctggaagaaatgattgtatcattgat
aaaattcgaagaaaaaattgcccagcgtgccgttaccggaaatgtcttcaggctggaatg
aacctggaagcaagaaaaacaaagaaaaaaataaaaggaattcagcaggccactactgga
gttgcacaagaaacttgtgaaaatccttctaacaaaacaatagttcctgccacgttaccc
caactcacccccacgctggtgtctctgctggaggtcattgaacctgaggtgttatacgca
ggctacgatagctcccttccggataccacctggaggatcatgaccacactcaacatgtta
ggtgggcggcaagtggttgcggcagtgaaatgggcaaaggcgataccaggattccggaac
ttgcacctggatgaccagatgaccctgttgcagtactcatggatgttcctcatggcgttt
gccttgggctggaggtcatacaaacaatccagtgcaaacctgctatgttttgctcctgat
ctgattattaatgaggaaagaatgagtctaccctgcatgtatgaacaatgtagacatatg
ctctttgtttcctcggagttaaaacggctgcaggtgtcttatgaagaatatctctgtatg
aaaaccttactgcttctctctacagttcctaaggaaggtttgaagagccaagagctattt
gacgaaatcagaatgacctacattaaagagctaggaaaagccattgtcaagagggaagga
aactccagtcagaactggcagcggttttatcaactaacaaaactcttggactctatgcat
gaagtggttgaaaatctccttcactattgcttccagacatttttggataagaccatgagt
attgaattcccagagatgttagctgaaatcataaccaatcagataccaaaatattcaaat
ggaaatgtcaagaaacttctgtttcatcaaaagtga
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