Ochotona princeps (American pika): 101530429 Help Entry 101530429         CDS       T07609                                  Symbol CCDC88A Name (RefSeq) girdin   KO K25392   girdin Organism opi  Ochotona princeps (American pika) Brite KEGG Orthology (KO) [BR:opi00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:opi03037]     101530429 (CCDC88A) Cilium and associated proteins [BR:opi03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    101530429 (CCDC88A) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HOOK T4SS_LegC2C7 KASH_CCD Motif Other DBs NCBI-GeneID:  101530429 NCBI-ProteinID:  XP_036352135 LinkDB All DBs Position 2:53013470..53133565 Genome browser AA seq 1558 aa AA seqDB search MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTSLEEYVALVDGVFLNQVMLQINPKLE SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSVKMAIM QKFEKQKTDAGEDVVEKTIVELSEERDGLHSLPHASSSAQSPCGSPGMKRTESRQHLSVE LADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLSDARSARMYRDEL DALREKAIRVDKLESEVTRYKERLHDIEFYKARVEVTHNQENVFDLQWMEVTDMSQEDIE PLLKNMALHLKRLIDERDEHSECLHALLIFWEIHLFVFQFIKAPQKSLGHEVNELTSSRL LKLEMENQSLTKTVEELRSSMDSVEGNTSKILKIEKENQRLSKKVEMLENEIIQEKQSLQ NCQNLSKDLMKEKAQLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARV KDIEKENKILHESIKETSSKLSKIEFEKRQIRKELEHYKEKGERAEEVENELHRLEKENE LLQKKITNLKITCEKTEALEHENSELEKENRKLRKTLDSFKNLTFQLESLEKENSQLDEE NLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKGLELMKASCKKTERLEVSYQGLD TENQRLQKALENSNKKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQ ETSQLEKDKKHLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKSLFKEISVYKESCIR LKELEKENKELVKRATIDIKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERL LHDEQSSDDRIVQGHSKHHKFSISKSDLVENSTLNSQSTSLMNQNAQLLIQQSSLENENE SVIKEREDLKSLYDSLVKDHEKLELLHERQASEYESLISRHGTLKSAHKNLEVEHKDLED RYNQLLKQKGQLEDLEKMLKVEQEKMLLESKNHETVAAEYRKLCGENDRLNHTYNQLLKE TEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNL EEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ YKFYDPSPPRRRGNWITLKMRKLIKSKKDINRDRQKSLTLTPTRSDSSEGFLQLPHHDSQ DSSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMV LAGQWTGSSENLEVPDDISTGKRRKELGAMAFSTTAINFSAVNSAAGFRSKQLVNNKDTT SFEDISPQGISDDSSTGSKVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNNQSRPQS HSSGEFSLLHDHETWSSSGSSPIQYLKRQTRSSPVLQLKMPETAEGRAYHKIKAGSPGSE VVTLQQFLEESNKLTSIQIKSSSQENLLDEVMKSLSVSSDFLGKDKPVSCGLASVISTAE GTTRRTSIHDFLTKDSRLPVSVDAPSSTADSNSTAAHNVDKVQESRNSKSRSREQQSS NT seq 4677 nt NT seq  +upstreamnt  +downstreamnt atggagaacgaaatctttactccccttttggagcagttcatgaccagtcccttggtcact tgggtgaagacgttcggacccctggccgcaggaaacgggaccagcctggaggagtatgtg gctttggtggatggggtgttcctgaaccaggtcatgctccaaataaaccctaaattggag agtcaaagagtaaataaaaaagtcaacaatgatgcctcacttagaattcataatctgtct attttggtgagacagataaaattttattatcaggagactttgcagcagttgatcatgatg tcattgccaaatgtgttaatcattggcaaaaatcctttttctgttaaaatggctattatg caaaaatttgaaaaacaaaaaacagatgctggtgaggatgttgttgaaaagactattgta gagctctctgaagagcgagatggtcttcattcgctaccccatgcgtcctcatctgcacag tccccctgtggttctccgggcatgaagcgaacagaaagtcgacagcatctgtcagtggag ctggcagatgctaaggccaagataagaagacttagacaggaactggaggaaaagactgaa cagttgttggactgtaaacaggaacttgagcaaatggaaatagaactaaaaaggctacag caagagaacatgaatttgctttcggatgctcgttctgcaagaatgtaccgagatgaatta gatgcacttcgagagaaggctatcagagttgataagcttgaaagtgaagtcaccagatat aaagaaaggctacatgacattgaattttataaggcaagagttgaggtaactcataatcag gaaaatgtatttgatctgcaatggatggaagtaaccgatatgtctcaggaggacatagaa cccctcttgaaaaatatggcattgcatctaaaaagacttatagatgagagggatgaacat tctgagtgtcttcatgctttactcattttctgggaaattcatctgtttgtttttcagttt attaaagcaccacagaaatccttgggccatgaagtgaatgagttgacatcaagtaggtta ttgaagttggagatggaaaatcagagcttgacaaaaactgttgaagagcttcgtagtagc atggattcagtagaaggcaacacttccaaaatactgaaaatagaaaaagaaaatcagagg ctgagtaaaaaggtcgaaatgcttgaaaatgagatcattcaagaaaagcaaagtcttcaa aattgccaaaatttaagcaaagatctaatgaaggagaaagcacagcttgaaaaaacaatt gaaacacttagagaaaattcagagagacagattaaaatattggaacaggaaaatgaacat ctgaatcaaacagtgtcttccttaaggcagcgttcacagataagtgctgaagcaagagtg aaagacattgaaaaagaaaataaaattctccatgaatctatcaaggaaacaagtagcaag ttgagtaagattgaatttgaaaaaaggcaaattagaaaagaattggaacattataaagaa aagggagaacgagcagaggaagttgaaaatgagttgcatcgtctagaaaaagaaaatgaa ttgttacagaaaaagataactaacttgaaaattacttgtgaaaaaactgaggccttagaa catgaaaattcagagctagaaaaagaaaacagaaaactgaggaaaactttggatagcttt aaaaacctaacttttcagttagaatcccttgaaaaggagaattcccaacttgatgaggaa aacttagagctgcgaaggaatgtggagtctttgaagtgtgccagcatgaaaatggctcag ctgcaactggaaaacaaagaactggaaagtgaaaaagagcaactgaagaaaggtttggaa ctcatgaaagcttcttgcaagaaaacagaacgcttagaagttagctaccagggtttagat acagaaaatcagagacttcagaaagctctggagaacagcaataaaaaaatccaacagtta gaaagtgaactacaagacctagagatggaaaatcaaacattgcagaaaaacctagaagaa ttaaaaatatctagcaaaagactagaacagctagaaaaagaaaataaatcactggagcaa gagacttctcagctggaaaaggataagaagcatttggagaaggaaaataagagactccga cagcaagcagaaataaaagacactacattagaagaaaacaatgtgaagattggaaattta gaaaaagaaaataaatctctattcaaagagattagtgtctataaagaatcttgtattcgt ctgaaagagttagagaaagaaaataaggagcttgtgaagagagcaactattgatataaaa acattggttaccttacgagaggatttggtgagtgaaaaattgaagactcaacaaatgaac aatgatcttgaaaagttaactcatgaacttgaaaagatagggttaaataaagaacgactc ttacatgatgagcaaagttctgatgacaggatagtccaggggcattcaaagcatcacaaa ttcagcatatccaaatcagatttagttgaaaattctacactcaattcccagagtacttca cttatgaaccaaaatgcacaactcctaatccaacagtcttctttagaaaatgaaaatgaa tctgtaatcaaagaacgagaagacctcaaatctctctatgattctctggtcaaagatcat gaaaagctggaacttcttcatgaacggcaggcttcagagtatgaatctctcatctcaaga catggaaccctaaagtctgcccataaaaatcttgaggtggagcataaagatcttgaagac cgttacaaccagttactaaaacagaaaggacaattggaagatttggaaaaaatgctcaaa gtagaacaagaaaaaatgctgcttgaaagtaaaaatcatgagacagtagctgctgaatac aggaaactttgtggtgaaaatgataggttgaatcacacatataaccagcttttaaaagaa actgaggtattacaaactgatcataaaaacttgaaaagtcttcttaataattctaaactg gagcaaacaagattggaagctgaattttcaaaactaaaggaacaataccaacagctggat atcacatccacaaagctgaataaccaatgtgagttgctaagtcaacttaaaggaaattta gaagaagaaaaccgacatctgctggatcaaattcagacattaatgctacagaacagaaca ctgctggagcaaaatatggaaagcaaggatctttttcatgtagaacaaagacagtacata gataagttaaatgaattaagacggcaaaaggaaaaattagaagagaaaattatggatcag tacaagttttacgatccatctcctccgaggaggagaggcaactggattactctaaaaatg agaaaattgattaagtctaagaaagatattaaccgggaccgtcagaaatctctgacatta acacctactcgctcagactccagtgaaggctttcttcaactccctcatcacgatagtcag gacagctcttcagtaggttcaaactctctcgaagacggccagactctggggaccaagaaa agcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagac aaaatgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtc cttgcaggacagtggacaggtagttctgagaatttggaggttcctgatgatatttcaacg ggtaaaaggaggaaagaattgggagctatggccttctctactacagccatcaacttttca gctgtcaactctgctgcaggcttcagatccaagcagttggttaataacaaagataccaca tcctttgaagacataagtccacaaggtattagtgatgattctagtacgggatcaaaagtt catgcgtcaagaccagccagccttgatagtggcagaacatccactagcaatagcaataat aacgcttcactacatgaagtcaaagcaggtgctgttaataaccaaagcaggccacaaagc cacagcagtggagagtttagcctgcttcatgatcacgagacttggtccagcagtggtagc agtccaatccagtacttgaaaagacaaaccagatcaagtccagtgctccaactcaaaatg cctgaaacagcagaaggacgagcgtatcacaagatcaaggctggttcccctggaagtgaa gtggttactctacaacagtttttggaagaaagcaacaagcttacctcaatacagataaag tcctcaagtcaagagaatcttttagatgaagtaatgaaaagtttgtctgtctcttctgac tttttgggaaaagacaagccagttagctgtggcttggccagtgtgatctctactgctgaa ggaactacacgaaggacaagcatccatgattttttgaccaaggacagtagactgcctgtg tcagttgatgctccatcatctactgctgatagcaacagcactgcagcacataatgtggac aaagtacaagaaagcagaaattcaaaaagcaggtctagggagcaacaaagctcctaa

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