Ochotona princeps (American pika): 101530543
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Entry
101530543 CDS
T07609
Symbol
VPS45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101530543 (VPS45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101530543 (VPS45)
Membrane trafficking [BR:
opi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101530543 (VPS45)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
101530543
NCBI-ProteinID:
XP_012783497
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Position
13:109788093..109883716
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AA seq
578 aa
AA seq
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MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNR
EIMKHLKAICFLRPTKLAHFYKEKFFLSSSYLMYSLYMKDKIKAYFSNVISKSDVKSLAE
ADEQEVVAEVQEFYGDYIAVNPHLFSLNILGCCQGRNWDLGQLSRTTQGLTALLLSLKKC
PMIRYQLSSEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTY
QAMVHELLGINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLME
DFQKKKPKEQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSE
AEQELACQNDHSSALQNVKRLLQNPKVTDLDAARLVMLYALHYERHSSNSLPGLMMDLRN
KGVPEKYRKLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHE
TLDHLIKGKLKENLYPYLGPSTLRDRPQDIIVFVIGGATYEEALTVYNLNRSTPGVRIVL
GGTTVHNTKSFLEEVVASGLHSRSKESSQVTSRSASRR
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtgtttgccgtgaagcagtacatttccaaaatgatagaggacagcgggccc
gggatgaaagtgcttctcatggataaggagacgaccgggatcgtgagcatggtgtacacc
cagtccgagattcttcagaaggaagtgtacctcttcgaacgcatcgattcgcagaaccgc
gagatcatgaaacacttgaaggcaatctgcttcctgcgacctacaaagctagcacatttc
tacaaagaaaaattcttcttatcttctagctacctgatgtacagtttatacatgaaagac
aagataaaggcttatttcagtaatgtgatcagcaagagcgatgtgaagtcattggctgaa
gctgatgagcaggaagttgtggctgaggttcaggaattttatggtgattatattgctgtg
aacccacacttgttttccctcaatattttgggctgctgccagggacgaaattgggatcta
ggccagctctccagaacaactcaaggactgacagctctccttttatctctgaagaagtgc
cccatgattcgttatcagctttcatcagaggctgcaaagagactagcggaatgtgttaag
caagtgataactaaagaatatgaactgtttgaattccggcggacagaggttcctccattg
ctacttattctagatcgctgtgatgatgccatcaccccattgctaaatcagtggacgtat
caggccatggtccatgaactgctgggaataaacaacaatcggattgacctttccagagtc
ccaggaatcagcaaagacttacgagaggtcgtgctgtctgcggaaaatgatgaattctat
gctaataatatgtacctcaactttgctgagatcggcagcaatataaagaacctcatggaa
gactttcagaagaagaagccaaaagaacagcaaaaactagaatcaatagcagacatgaag
gcctttgtcgagaattatccgcagttcaagaagatgtctgggactgtgtcaaagcatgtg
acagtggttggagaactgtctcggttggtcagtgagaggaatctgctggaagtttcagag
gctgaacaagaactagcctgtcaaaatgaccactccagtgctctccagaacgtcaagagg
ctgctgcagaatcccaaagtgaccgacttggacgctgcccgcctggtgatgctctatgct
ctacattatgagcgacacagcagcaacagtctaccaggactaatgatggacctcaggaat
aaaggcgtgcccgaaaaatatcgaaagctggtgtctgcagttgtggagtatggtggcaaa
cgggtcagaggaagtgacctcttcagccccaaagacgccgtggctatcaccaagcagttc
ctcaaaggattgaagggggtagaaaatgtatacacacagcaccagccttttctacatgag
accctggaccatcttatcaaaggaaagctgaaggaaaacctctatccttatctcggcccc
agcacactcagggacaggcctcaggatatcatcgtgtttgtaatcggaggagccacctat
gaggaagcactaacggtttataacctgaaccgcagcaccccaggagtaaggatcgtcctc
ggaggaaccacagtgcacaacaccaaaagtttcctagaggaagttgtggcttctggactg
cacagccgaagcaaggagagctcacaagtcacctcgaggtcagccagcagaagatga
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