KEGG   Ochotona princeps (American pika): 101530642
Entry
101530642         CDS       T07609                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X2
  KO
K08524  retinoid X receptor alpha
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03320  PPAR signaling pathway
opi04148  Efferocytosis
opi04151  PI3K-Akt signaling pathway
opi04659  Th17 cell differentiation
opi04919  Thyroid hormone signaling pathway
opi04920  Adipocytokine signaling pathway
opi04928  Parathyroid hormone synthesis, secretion and action
opi04932  Non-alcoholic fatty liver disease
opi04976  Bile secretion
opi05160  Hepatitis C
opi05200  Pathways in cancer
opi05202  Transcriptional misregulation in cancer
opi05207  Chemical carcinogenesis - receptor activation
opi05216  Thyroid cancer
opi05222  Small cell lung cancer
opi05223  Non-small cell lung cancer
opi05226  Gastric cancer
opi05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:opi00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    101530642 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    101530642 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    101530642 (RXRA)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    101530642 (RXRA)
   03320 PPAR signaling pathway
    101530642 (RXRA)
   04919 Thyroid hormone signaling pathway
    101530642 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    101530642 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    101530642 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101530642 (RXRA)
   05202 Transcriptional misregulation in cancer
    101530642 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    101530642 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    101530642 (RXRA)
   05216 Thyroid cancer
    101530642 (RXRA)
   05222 Small cell lung cancer
    101530642 (RXRA)
   05223 Non-small cell lung cancer
    101530642 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    101530642 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101530642 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    101530642 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:opi03000]
    101530642 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:opi03310]
    101530642 (RXRA)
Transcription factors [BR:opi03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    101530642 (RXRA)
Nuclear receptors [BR:opi03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   101530642 (RXRA)
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1 tRNA_bind_3
Other DBs
NCBI-GeneID: 101530642
NCBI-ProteinID: XP_004593503
LinkDB
Position
Unknown
AA seq 432 aa
MAAPSLHPSLGPGLGSALGSAGQLHSPINGMGPPFSVISPPVGPHSMSVPTTPTLGFGTG
SPQLNSPMNPVSSSEDIKPPLGLNGVLKVPTHPSGNMASFTKHICAICGDRSSGKHYGVY
SCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQ
RGKDRNESEVESTSSANEDMPVEKILEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQ
AADKQLFTLVEWAKRVPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGL
HVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVE
ALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTF
LMEMLEAPHQMT
NT seq 1299 nt   +upstreamnt  +downstreamnt
atggccgcgccctccctgcacccctccctggggccgggcctgggctcggcgctcggctct
gctgggcagctacactcacccatcaacggcatgggcccacccttctcggtcatcagtcct
cccgtgggaccccactccatgtccgtgcccaccacgcccaccctgggctttggcaccggt
agcccccagctcaactcgcccatgaaccctgtcagcagcagtgaggacatcaagccccca
ctaggcctcaatggcgtcctcaaagtccccacccacccctcgggaaacatggcgtctttc
acgaagcacatctgtgccatctgcggggaccgctcctcaggcaagcactatggcgtgtac
agctgcgaaggctgcaaaggcttcttcaagcggacagtgcgcaaggacctgacctacacg
tgccgcgacaacaaggactgcctgattgacaagcggcagcggaaccggtgccagtactgc
cgctaccagaagtgcctggccatgggcatgaagcgggaagccgtgcaggaggagcggcag
cgaggcaaggaccggaacgagagtgaggtggagtccaccagcagcgccaacgaggacatg
cccgtggagaagatcctggaggccgagctggccgtggagcccaagaccgaaacgtacgtg
gaggcgaacatggggctgaaccccagctcgcccaacgatccggtcaccaacatctgccag
gcggccgataagcagctcttcacgctcgtggagtgggccaagcgggtcccacacttctcc
gagctgcccctcgatgaccaggtcatcctactgcgggcaggctggaatgagctgctcatc
gcctccttctcgcaccggtccatcgctgtgaaggacgggatcctgctggccacggggctg
cacgtgcaccgtaacagcgcccacagtgcaggggtgggcgccatcttcgacagggtgctg
acggagctggtgtctaagatgagggacatgcagatggacaagacagagctgggctgcctg
cgcgccatcgtcctcttcaatcccgactccaagggcctgtccaacccggcggaggtggag
gcactgagggagaaggtgtatgcgtcactggaggcttactgcaaacacaagtacccggag
cagcccggcaggtttgccaagctgctgctgcgcctgccggccctgcgctccatcgggctc
aagtgcctggagcacctcttcttcttcaagctgatcggggacacacccatcgacaccttc
ctcatggagatgctggaggcgccgcaccagatgacctag

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