Ochotona princeps (American pika): 101530733
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Entry
101530733 CDS
T07609
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03082
ATP-dependent chromatin remodeling
opi04714
Thermogenesis
opi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101530733 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101530733 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101530733 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101530733 (SMARCD2)
03036 Chromosome and associated proteins [BR:
opi03036
]
101530733 (SMARCD2)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101530733 (SMARCD2)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101530733 (SMARCD2)
PBAF complex
101530733 (SMARCD2)
GBAF(ncBAF) complex
101530733 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
101530733
NCBI-ProteinID:
XP_004597306
LinkDB
All DBs
Position
19:complement(35449046..35453422)
Genome browser
AA seq
484 aa
AA seq
DB search
MDGLSYWPRSRLPLTYTPPLSHFPQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGM
PPTMMDPFRKRLLVPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFER
KLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSGGTAGTPGGTPAGDKV
ASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQ
VKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDG
HEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYD
IDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDF
IQEWLRSQRRDLKIITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLG
IRLT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggatggcctgagctactggccgcgcagcaggctaccactgacctatacacccccactg
tctcacttcccccagcggcctggcatgtcacccgggagccggatgcccatggctggctta
caggtgggacccccagccggctccccatttggcacagctgctccactgcgtccaggcatg
cccccgaccatgatggatccattccgaaaacgcctgcttgtgccccaggcccagccccca
atgcctgcccagcgtcgagggttaaagaggaggaagatggcagataaggttctacctcag
cgaatccgggagctcgtcccagagtctcaggcatacatggatctcctggcttttgagcgg
aagctggaccaaaccatcgcccggaagcgcatggagatccaggaggccattaagaagcct
ctgacgcaaaagcgaaagcttcgcatctacatttccaatacattcagtcccagcaaagca
gaaggcgatagtgggggaactgcaggaacccctgggggcacccctgcaggggacaaggtg
gcttcctgggaactacgagtagaaggaaaactgctggatgatcctagcaaacagaagagg
aagttttcttcattcttcaagagccttgtcattgagttggacaaggagctgtatgggcct
gacaaccacctggtggagtggcaccgcatgcccaccacccaggagacagatggcttccag
gtaaaacggcccggagacctcaatgtgaagtgcaccctcttgcttatgctggatcaccag
cctccgcagtacaaattggatccccgactggcgaggctgctaggagtgcacacccagaca
agggccgccatcatgcaggccctgtggctttacatcaaacacaaccagctgcaggacggg
cacgagcgcgagtacatcaattgcaaccgttacttccgccagatcttcagttgtggccga
ctccgtttctctgagatccccatgaagctggccgggctgctgcagcatccagatcccatt
gtcatcaaccacgtcattagtgtggatcctaacgaccagaagaagacagcctgttatgac
atcgacgtggaggtggatgatccactcaaagcccagatgagcaacttcctggcttccacc
accaatcagcaggagattgcctccctggatgtcaagatccacgagaccattgagtctatc
aaccagctgaagacccagagggatttcatgctcagcttcagcactgacccccaggacttc
atccaggagtggctgcgttcccagcgccgggacctcaagatcatcaccgatgtgatcggc
aatcctgaggaggagagacgagctgctttctaccaccagccctgggcccaggaggcagtg
gggcggcacatctttgccaaggtgcagcagcggcggcaggaactggaacaggtgctgggc
atccgcttgacctaa
DBGET
integrated database retrieval system
