Ochotona princeps (American pika): 101530740
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Entry
101530740 CDS
T07609
Symbol
RFC3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03030
DNA replication
opi03410
Base excision repair
opi03420
Nucleotide excision repair
opi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101530740 (RFC3)
03410 Base excision repair
101530740 (RFC3)
03420 Nucleotide excision repair
101530740 (RFC3)
03430 Mismatch repair
101530740 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opi03032
]
101530740 (RFC3)
03036 Chromosome and associated proteins [BR:
opi03036
]
101530740 (RFC3)
03400 DNA repair and recombination proteins [BR:
opi03400
]
101530740 (RFC3)
DNA replication proteins [BR:
opi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101530740 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
101530740 (RFC3)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101530740 (RFC3)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101530740 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
101530740 (RFC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
AAA
Rad17
AAA_22
Sigma54_activ_2
ABC_tran
zf-HC2
AAA_2
AAA_16
nSTAND6
AAA_11
MTC2_N
Motif
Other DBs
NCBI-GeneID:
101530740
NCBI-ProteinID:
XP_004577601
LinkDB
All DBs
Position
8:13909001..13927168
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPCSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQTITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AVRVPAPSIEEICHVLTAVCKKEGLTLPSQLAHRLAEKSRRNLRKALLMCEACRVQQYPF
TADQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtgggtggacaagtaccggccctgctccttggcgcgcctggactaccacaag
gagcaggcggcccagctgcgcaacctggttcagtgtggtgactttcctcacctgttagta
tatggaccctcaggtgctgggaaaaagacaaggattatgtgtatcctgcgcgaactttat
ggtgttggagtggagaaattaagaatcgaacatcagaccatcacaactccatccaaaaag
aaaattgaaatcagcaccattgcaagtaattaccatcttgaagttaatcccagtgatgct
ggaaatagtgaccgagtagtaattcaagagatgttgaaaacagtggcgcaatcacagcaa
cttgaaacaagctctcaaagagattttaaagtggtgttattgacagaagtggacaaactc
accaaagatgctcaacatgccttgcgcagaacaatggaaaaatacatgtctacatgcagg
ttgatcttgtgttgcaattctacatccaaagtgattccacccattcgtagcaggtgcctg
gcggttcgcgtgcctgctcccagcattgaagagatttgccatgtgttaactgctgtgtgc
aagaaagaaggtctgactcttccttcccagctggcccatcggctggcagagaagtcccgc
agaaatctccggaaagccctactgatgtgcgaagcatgcagagtccaacaataccctttc
actgcagatcaagaaatccctgagacagactgggaggtgtatctgcgggagactgcgaat
gccattgtcagtcagcaaactccacagaggctccttgaagtccgtggaaggctctatgag
cttttaacacattgcattcctcctgagataataatgaagggtctcctctcagaacttttg
cataattgcgatggacaactgaaaggggaagtggcccagatggcagcttattatgaacat
cgtctccagctgggtagcaaggccatttatcatttggaagcctttgtagccaaatttatg
gcactttataagaagtttatggaggatggattagaaggcatgatgttctga
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