Ochotona princeps (American pika): 101530890
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Entry
101530890 CDS
T07609
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec16B
KO
K20353
COPII coat assembly protein SEC16
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101530890
Membrane trafficking [BR:
opi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101530890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Zona_pellucida
Motif
Other DBs
NCBI-GeneID:
101530890
NCBI-ProteinID:
XP_036353525
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Position
13A:complement(11696642..11741265)
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AA seq
948 aa
AA seq
DB search
MEPWVSQWPPQPQGRPSSPAQEPEGALQRDGLRRSATHSRNNRERLPRWQEVRGSPQPQQ
DPRLGQQQPHPVSWRGLWQQRGSGADYHGQLYSRPSYEGAYQNYHSPALKGDYAYRSHYY
HGHPQWLQEERVPRHGSPFVWHEEYRDQRYLREHHHENQRSSFGRNDESQFQRSTRRNPY
QDDLGQDRPNELLPETLLSGTWKNKPSLASKSNLLRQHESGLSSSSYELSQYMVDMSEQY
NATAAAGWRPVSAEDVLVAGPKAPKKFHVPHVSVSFGPGGQLVCVSPSSPTDGQTALVEL
HSMEVLLNDWEEQEEMRMFPGPLTRXIMRELLRKGSGNLXXXXXGSRDSALLWQLLVLLC
RQNGSMAGSDIAELLMRDCKKLDKYKRQPPVDNLIKLTNEDHPVLSSGTRNLLTGEIPPS
VETHAQIVQKFTKLLYYGRKKEALEWAMKNNLWGHALFLSYKMDPRTYNWVMSGFTSTLA
LNDPLQTLFQLLSGRIPQAATRSYLPSCWAHPSPCSSSQVYKLIYASRLADYGLASQALY
YCEAIGTAILSHPGHPESSHPVLLEELIKLAERLKLSDPLVLERHRGDGVWEPVWLRQLR
RHWELQQKIAGDAGDPRSTNAYLSLLSPTSSEPTLYQDLSGYQGYPKAPGYQPDPWPTAE
LTDLPQPGPQQPFSLQPGPEAGQAGTPGPETHLPVSVEQPQAPEGRIWEDTLWTHPVPGD
VTESTATPEIFQQLDSLEVVSSSQVPLAPRARTSSETSTRLVKKAEEESSDEADGKSPPD
TARKGKPADRKENGKSSGFGWFSWFRSKPTKNASPSGEEDSSDSPDSEQENPRASSPSEA
GQDLSLTPPLESPPVPGGGTFSRDKGRAEVRGGLPTPGMDNGTGIGDLSGPGGVSSELYS
GPGVLLPPPSLEGAVPLYNPSQVPQLPMATGLNRPNRLAQRRYPTQPC
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttgggtttctcagtggccacctcagccccaggggaggcccagctcaccagca
caggaacctgagggagcgcttcagagagatggactccgtcggtctgccacgcattctcgc
aacaacagggagaggcttccccgatggcaggaggtccgggggagcccccagccccagcag
gaccccaggctgggtcagcagcagcctcaccctgtgtcctggcgtgggctgtggcaacag
cgtggatctggggctgactaccatggtcagttgtattcaaggcccagttatgagggtgcc
tatcagaactaccactctccagccctgaagggagactatgcttacagaagtcattactat
cacggacacccgcagtggctgcaggaagaaagagtgccaaggcacgggagtccttttgtc
tggcatgaagagtatcgggatcagaggtacctccgagagcatcatcatgaaaaccaaagg
agttcatttggaagaaatgatgagagccagttccagaggtccaccaggcggaatccttat
caagatgaccttgggcaggacagaccaaatgagcttttgccagagacgttgttgagtggg
acctggaagaacaagccgtcattggccagcaaatccaaccttctccggcagcatgagtcc
ggcctcagctccagcagctatgagctcagtcaatacatggtggatatgtcagagcagtac
aatgctacggctgcagcaggctggcgtccagtgtcagcagaggatgtcttggtggctggt
cccaaggcgcccaagaagttccatgtccctcatgtgtccgtaagttttgggccaggaggt
cagctggtgtgtgtgagtccgagttcccccacggatgggcaaaccgctcttgttgagctg
cacagcatggaggttcttctcaatgattgggaggaacaagaggagatgaggatgttccca
ggacccctgaccaggtaaatcatgcgcgagctgctgaggaagggctctggaaacctnnnn
nnnnnnnnnnngggcagcagagactcagctctcctgtggcaactgttggttctcctttgt
cgccagaacgggtccatggcggggtctgacattgctgagctgctgatgcgagactgcaag
aagctggacaagtacaagaggcagccccccgtggacaatctcatcaaactgaccaatgag
gaccacccggtgctgagctctgggacgaggaacctactcactggggagatcccccccagc
gtggaaacacacgcacagattgtgcaaaagttcacgaaactgctctactacggaaggaag
aaggaggccttggagtgggccatgaagaacaatctgtggggccatgccttgttcctatcc
tacaagatggacccaaggacttacaactgggtcatgagtggcttcaccagcacgctggcc
ctcaacgaccccctgcagaccctctttcagctcttgtccgggaggatcccacaggcagcc
acgaggtcttatctaccttcctgctgggctcatccctcgccctgttcctcttcgcaggtg
tataagctcatttatgcttcccgcctggcagattatggcctggcgtcccaggccttgtat
tactgtgaagccattggcacggccatcctgagccatcctggccatcctgagagcagccat
cctgtgctgctagaggaactcatcaagctggctgagaggctgaagctgtcagacccgctg
gttcttgagcggcaccgtggagatggggtctgggagcctgtctggctgcggcagcttcgg
cggcactgggagctgcagcaaaagatcgcgggagatgctggggaccctcgctctacaaac
gcgtatctctcactgctttctcctacgtcctcagagcccactctctatcaggatctttct
ggatatcagggctacccaaaggccccagggtaccagccggacccatggcccacagctgag
ctgaccgacctgcctcaacctggcccacagcaacccttctccctccagccaggccctgag
gcagggcaggcagggacacctgggcctgagacccacctcccggtcagtgtggagcaacca
caggctcctgaaggaaggatctgggaggacacgctgtggacgcacccggttcccggagat
gttacggagagcacagcaactccagaaatcttccagcagctggacagtctggaagtcgtt
tcctcatcccaggtgccgctggctccccgggcgcggacttcctctgagacctccaccagg
ttggtcaagaaggccgaggaggagtcctctgacgaggcagatggaaaatctcccccagat
acagcacgcaaagggaagccggccgataggaaagagaacggcaagagctccgggttcggc
tggttcagctggtttcgctcgaagcccaccaagaatgcatccccctccggagaggaggac
tcctcagacagccctgactcagagcaggagaaccccagagcatcttctccctccgaggct
ggccaggacctctcattgacccccccactggagtctccacccgtgccaggtggtggcacc
ttctctagggacaaaggaagggctgaagtccgaggaggcctgcctaccccagggatggat
aacggcactgggattggagacctgtctgggccagggggtgtgtcctctgagctctactcc
ggtcctggggttctacttcctccaccttccttggagggggctgtccctctctacaaccca
tcccaggttccgcagctgcccatggctactggcctcaatcggccaaaccgcctggctcag
cgccgctaccccacgcagccctgctga
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