Ochotona princeps (American pika): 101530992
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Entry
101530992 CDS
T07609
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X30
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04517
IgSF CAM signaling
opi04721
Synaptic vesicle cycle
opi04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101530992 (RIMS1)
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
101530992 (RIMS1)
04721 Synaptic vesicle cycle
101530992 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101530992 (RIMS1)
Membrane trafficking [BR:
opi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
101530992 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
101530992 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
101530992
NCBI-ProteinID:
XP_004580518
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All DBs
Position
12:63442953..63631281
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AA seq
1013 aa
AA seq
DB search
MCAPGIPVSSEGWEEVRSIDSKEGRSQVRRGGAGDLDYYWLDPATWHSRETSPISSHPVT
WQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADV
VGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPP
LESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQA
TDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRER
MLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPR
RHVHGESSSKKLQRSQRISDSDISDYEIDDGIGVVPPGAYRSSARESKSTTLTVPEQQRT
THHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRSR
DVDSQYLSEQDSELLMLPRAKRGRSAECLHTTSELQPSLDRARSASTNCLRPDTSLHSPE
RERQPRKSERSSIQKQTRKGTASDAERMHRQGSPAQSPPADAPFSNRRGRQLPQVPVRSS
SIEQASLVVEERTRQMKMKVHRFKQTTGSGSSQELDREQYSKYNIHTDQYRSCDNVSAKS
SDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISSFTPKMQGRRMGTSGRAITKST
SVSGEIYTLEHNDGSQSDTAVGTVGAGGKKRRSSLSAKVVAIVSRRSRSTSQLSQTESGH
KKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRLGADSQFSDF
LDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPAPYVKV
YLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVA
QILLEELDLSSMVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcacctggtattcctgtctcttcagaagggtgggaagaagtgaggtccattgat
tctaaggagggaaggagccaggtccgacgaggaggtgccggtgacttggattattactgg
ttggatcctgctacgtggcatagccgggaaacatcccctattagttcgcatcctgtaacg
tggcaaccatctaaagaaggggaccgattgattggacgtgttattcttaacaagagaaca
accatgcccaaagaatcaggtgcattactgggtctgaaagttgtcggaggaaaaatgact
gacttgggacgccttggtgctttcatcaccaaagtaaagaagggtagcctagcagatgta
gttggacatctaagagcaggggatgaagttctagaatggaatggtaaacccctgccggga
gctacaaatgaagaagtttacaacattattttagaatcaaaatcagaacctcaagttgaa
attattgtttcaaggcctattggtgacattccccggattcctgagagctcccatcctcca
ttggagtccagttccagttcctttgaatctcagaagatggagaggccttccatttctgtt
atttctccaacaagtcctggagctctaaaagatgccccacaagtcttaccagggcagctt
tctgtgaagctatggtacgataaagtggggcaccaactgattgtaaatgtcttgcaagca
acagatctaccccctagagttgatgggcgtccccggaatccttatgtaaaaatgtatttt
cttccagatagaagtgataaaagcaaaaggaggaccaaaacggtgaagaaagtgctagaa
ccgaaatggaatcaaacctttgtgtattcacatgtgcatcgtagggattttagagaacga
atgctagaaatcactgtgtgggatcaacccagagtgcaagaagaggaaagcgaatttctt
ggagagatccttatagagttagaaacagcacttttagatgatgaaccacactggtataaa
cttcagacccatgatgaatcctcactacctctgcctcagccatcacctttcatgccaagg
cgacacgttcatggagaaagctctagcaagaagctacaaagatctcagcgaatcagtgat
agtgacatctcagattatgagattgatgatggtattggagtagttcctccaggtgcttat
aggtctagtgctagagaaagtaaatctacaacattaactgtgccagagcagcaaagaaca
actcatcaccgctcacgttcagtgtctcctcaccgcggcgatgatcagggaaggccgcgt
tcacgtttaccaaatgtgccattacagaggagtttagatgaaatccatccaacgagaagg
tcccgttctccaaccagacaccatgatgcctccagaagtccagttgatcatagatccaga
gatgtggatagtcagtatttatcagaacaagacagtgagcttcttatgctgcccagagca
aaacgaggacgaagtgcagaatgcctacatactaccagtgaactgcagccctcccttgac
agggctaggagtgctagtaccaactgcttgagaccagatactagtttgcattcaccagaa
cgagaaaggcagcccagaaagtctgaaagatctagcatccaaaaacagactaggaaaggc
actgcctctgatgcagaaagaatgcaccgacaaggaagtccagcccagtctcccccggct
gacgcgcctttcagtaaccgcaggggacgacaactcccacaagtgccagtgaggagcagc
agtatagaacaagcaagcttagtagtggaggagcgaacaagacagatgaaaatgaaagtg
catcgatttaagcagacaacagggtctggttctagtcaagaacttgatcgcgagcaatat
tccaagtataacatacatacagatcagtaccgaagctgtgataacgtctctgccaaatca
tcagatagtgatgtgagtgatgtgtctgccatttcccgaaccagcagtgcctcacgcctc
agcagcacaagctttatgtcagagcaatctgagcgccccaggggtagaatcagttcattt
acccccaaaatgcaaggcagacggatggggacttcaggaagagccatcacgaagagcacc
agtgtcagcggagagatatacacactagagcataatgacggcagccagtcagacacagct
gtgggtacagtcggcgcaggtggaaagaaacggagatccagcctgagtgccaaagtggta
gccatagtatctcgaaggagtaggagtacatcgcagctcagccaaacagagtcaggccac
aagaagttaaaaagcaccatacagaggagcacagaaacaggcatggcggctgaaatgagg
aagatggtacggcaaccgagtcgagagtctactgatggcagcatcaacagttacagttct
gaaggaaacttaatatttcctggagtgcgactaggggctgacagtcaattcagtgatttt
cttgatggactgggccctgcccagcttgttggccggcagacccttgccacacctgcaatg
ggtgatatacaaattggaatggaggataaaaagggccagttggaagttgaagttatcaga
gcacgcagtctcacacaaaagcctggttccaaatccacacctgctccatatgtgaaagta
tatcttttggaaaatggggcctgcatagccaagaagaagaccagaattgcacggaaaacc
cttgatcctctgtatcagcagtccctggtttttgatgagagtccacagggtaaagttctg
caggtgattgtctggggggactatggcagaatggaccataaatgcttcatgggcgtggct
cagatcttgttggaagagctcgacttgtccagcatggtaatcggatggtacaagttattc
ccaccatcgtccctggtggatcccacactcactcccctgacccgccgagcttcccagtcg
tctctggaaagttcaactgggcccccctgcatccgatcatag
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