Ochotona princeps (American pika): 101531086
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Entry
101531086 CDS
T07609
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04068
FoxO signaling pathway
opi04110
Cell cycle
opi04120
Ubiquitin mediated proteolysis
opi04150
mTOR signaling pathway
opi05169
Epstein-Barr virus infection
opi05200
Pathways in cancer
opi05203
Viral carcinogenesis
opi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101531086 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
101531086 (SKP2)
04150 mTOR signaling pathway
101531086 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101531086 (SKP2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101531086 (SKP2)
05203 Viral carcinogenesis
101531086 (SKP2)
09162 Cancer: specific types
05222 Small cell lung cancer
101531086 (SKP2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
101531086 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101531086 (SKP2)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101531086 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
101531086
NCBI-ProteinID:
XP_004583705
LinkDB
All DBs
Position
11:complement(20765185..20793839)
Genome browser
AA seq
424 aa
AA seq
DB search
MHRKHLQEIPDQSGNISTSFTWGWDSNKTSELLSGMGVSALEKEEVDSENIPQELLSNVG
HPQSPPRKRLKSKGNEKDFVIIRRPKLNRENLPGVSWDSLPDELLLGIFSCLCLPELLKV
SGVCKRWYCLAFDESLWQTLDLTGKNLHPDVIGRLLSRGVVAFRCPRSFVDQPLGEHFSS
FRVQHMDLSNSVINVSTLHGILSQCSKLQNLSLEGLQLSDLIVSNLGQNSNLLRLNLCGC
SGFSESALQTLLSSCSRLDELNLSWCYEFTEKHVQVAVAHVSETITQLNLSGYRKNLQQS
DVSTLVRRCPNLVHLDLSDSIMLKNDCFPEFYQLNYLQHLSLSRCYDIVPETLLELGEIP
TLKTLQVFGIVPDGTLQLLREALPHLQINCSHFTTIARPTIGNKKNQEIWGIKCRLSLQK
PSCL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggaaacacctccaggagatcccggaccagagcggcaacatcagcaccagcttc
acgtggggatgggattccaacaagacttctgagctgctgtcaggcatgggggtctccgcc
ctggagaaggaggaggtggacagcgagaacatcccccaggagctgctctccaacgtgggc
cacccgcagagccccccgcggaaacggctcaagagcaaaggcaatgagaaagacttcgtg
attatccgcagacccaagctcaacagagaaaaccttccaggggtttcctgggactccctt
cctgacgagctgctcctgggaatcttttcctgtctgtgcctccctgagttgctgaaggtg
tctggggtttgtaagaggtggtactgcctagcgtttgatgagtctctctggcaaacatta
gacctcacaggtaaaaatctgcaccctgatgtgattggtcggctgctgtctcgaggggtg
gttgctttccgctgcccacgatcgtttgtggaccagccgttgggtgaacatttcagctct
tttcgtgttcagcacatggacctatcaaattcagttataaatgtgtctaccctccatggc
attctgtctcagtgctccaagctgcaaaatctaagcctagaaggcttacagctttcggat
ctcattgtcagtaatcttggtcagaactcaaatttactgcgactaaacctttgtgggtgt
tctggattctctgaatctgccctgcagactctgctaagcagctgctccagactagacgag
ctgaacctctcctggtgctatgagttcactgagaagcacgtgcaagtggctgtcgcgcac
gtttcagagaccatcacccagctgaatctcagtggctaccggaagaatctccagcagtca
gatgtctctaccctagttagaagatgccccaatcttgtccatctagacttaagtgacagt
atcatgttgaagaatgactgctttccggaattttaccagctcaactacctccaacacctc
tccctcagtcgatgctatgatatagttcctgaaactttacttgaacttggagaaattccc
acgctaaaaacactacaagtttttggaatcgtgcctgacggaacccttcaactgttaagg
gaagccctgcctcatctacagattaattgctcccatttcaccacaattgccaggccaact
attggcaacaaaaagaaccaggagatttggggcatcaaatgccgactgtcactgcaaaaa
cccagttgtctatga
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