KEGG   Ochotona princeps (American pika): 101531088
Entry
101531088         CDS       T07609                                 
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
opi  Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:opi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:opi04812]
    101531088 (KATNB1)
Cytoskeleton proteins [BR:opi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     101531088 (KATNB1)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_RIG_1st WDR54 RMC1_N eIF2A Beta-prop_IP5PC_F Beta-prop_NWD2_C VPS8_N Beta-prop_LRRK2 PROPPIN Tricorn_2nd Beta-prop_pof12 Beta-prop_WDR35_TULP_N Beta-prop_ACSF4 Ge1_WD40
Other DBs
NCBI-GeneID: 101531088
NCBI-ProteinID: XP_004583948
LinkDB
Position
5:29231781..29250511
AA seq 656 aa
MMATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGEDCRVNLWSINKPNCIMSL
TGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF
VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHMVKLWDLTAG
KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLF
NPDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAISHSNVSSYV
VDLTRVTRTGTVPQDPVQDSRPLAQQPPNPSVPLRRIYERPSTTCSKPQRVKQNSESERR
SPSSEEDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDTPTVKEAAK
PSPAMDVPFPMPNLEAPPRPPAVTSASAPKGEPAVIPATRNEPIGLKASDFLPAVKIPQQ
AELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWTTSDIKTSVDSAVAINDLSVVVD
LLNIINQKASLWKLDLCTTVLPQVEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAA
PPSVGVDISREERLHKCRLCYKQLKSISGLVKSKSGLSGRHGSAFRELHLLMASLD
NT seq 1971 nt   +upstreamnt  +downstreamnt
atgatggccaccccagtggttaccaagactgcctggaagttgcaggagatcgtggcccat
gccagcaatgtgtcctcacttgtgctgggcaaagcctctgggcggctgctggcgacaggc
ggggaggactgccgtgtcaacctgtggtccatcaacaagcctaactgcatcatgagcctg
acaggccacacgtccccagtggagagcgtccgcctcaacacccctgaggagctgatcgtg
gcgggttcccagtcaggctccatccgcgtctgggacctggaagctgccaaaattcttcgc
accctcatgggacacaaagccaacatctgcagcctggatttccatccctatggcgagttc
gtggcctctggctcccaggacacaaacatcaagctgtgggacatcaggagaaaaggctgt
gtcttccgataccgggggcatagccaggccgtgcggtgtctccggtttagccccgatgga
aagtggttggcatcagctgcagacgaccacatggtgaagctctgggacctgactgccggc
aagatgatgtccgagtttcctggccacacagggcccgtcaacgtagtggaattccacccc
aatgagtacctcctggcctccggtagctctgacaggacaatccgattctgggatctagag
aagttccaggtggtgagctgcatcgaaggagaaccagggccagtaaggagcgtcctcttc
aaccccgatggctgttgcctgtacagtggctgccaggactcactgcgtgtctatggctgg
gagcccgagcgctgctttgacgtggtcctcgtcaactggggcaaggtggctgacctagcc
atctgcaacgaccaactgataggtgtggccatctcccacagcaatgtctcctcttacgtg
gtggacctgacccgggttaccaggacgggcacggtaccccaggatcccgtgcaggacagc
cggcccctggcgcagcagccacccaaccccagtgtcccgctccggcgcatctatgagcgg
cccagcacaacctgtagcaagcctcagagggtgaagcagaactcagagagtgaacggcgc
agtcccagcagtgaggaggaccgggacgagcgtgagtcccgggctgagatccagaacgct
gaggactacaatgagatcttccagcccaagaacagcatcagccggacaccaccccgaaga
agtgaacccttcccagcacccccagaggatgatacgcccacagtgaaggaggcagcaaag
cccagcccagccatggatgtgccgttcccaatgccaaatcttgaggccccaccccggccc
ccggccgtcacctccgcatctgcacccaagggtgaacccgccgtcatccctgctacccgg
aacgagcccatcgggctcaaggcctccgacttcctgcctgctgtgaagatcccgcagcag
gcggagctggtggacgaggatgccatgtcgcagatccgcaaagggcacgacactatgtgt
gtggtgctcaccagccgtcataagaacctggacactgtgcgtgccgtgtggaccacaagt
gacatcaagacctcggtggactcggctgtggccatcaatgacctctcggtggtagtggac
ctgctgaacatcatcaaccagaaagcctccctgtggaaactggatctgtgcaccactgtc
ctgccacaagtcgagaagcttctacagagcaaatatgagagctatgtacagacgggctgc
acctccctaaagctgatcctgcagcggtttctgcccctcatcacagacatcttggcagca
ccaccctctgtgggtgttgacatcagccgggaggagaggctgcacaagtgccggctgtgc
tataagcagctcaagagcatcagcggcctcgtcaagagcaagtcaggcctgagtggccgc
catggcagtgccttccgagagctacacctgctgatggccagtttagactga

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