Ochotona princeps (American pika): 101531144
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Entry
101531144 CDS
T07609
Symbol
SDK1
Name
(RefSeq) protein sidekick-1
KO
K16353
protein sidekick
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101531144 (SDK1)
Cell adhesion molecules [BR:
opi04515
]
Immunoglobulin superfamily
Other
101531144 (SDK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
ig
Ig_2
Fn3_VIN3
V-set
Ig_5
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
101531144
NCBI-ProteinID:
XP_036348840
LinkDB
All DBs
Position
6:3192154..3932171
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AA seq
2101 aa
AA seq
DB search
MATVDDVPPYFKTEPGLPQVHLEGNRLVLTCLAEGSWPLEFKWMRNDSELTAYSNEYKYV
IPSLQQLDAGFYRCVVRNRMGALLQKKSEVRVAYMGEFTATEQKKTVSEGHAAVLTLTPI
SSHPRPQVTWFREGHKIIPSHRIAITLDNQLVILATTASDAGAYYVQAVNERNGENKTSP
LVHLDVAKPLQTHTPSPHKHTAGQLMGFTRHHWPVEELSVSWKRNGVRVTSGLHSFGRRL
TISSPTSADTGAYVCEATLRGGALEPARAKAFLSIIEPPYFTTEPESRILAEVEETVDIV
CRAMGVPLPALQWYKDAISINKLRNPRYKVLASGSLRIQKLRPEDSGMFQCFASNEGGEI
QTHTYLAVTNVAPAFVQRPVDTTVTDGMTAVLQCEVSGAPKPAVTWKRGNRVLASGSVRI
PRFMLLESGGLQISPVFIHDAGNYTCHAANTEGSLDARAALTVWNRTAIVHPPEDRVVIK
GTTATLRCGATHDPRVSLRYVWKKDSVRLTPSSNSRIVLERDGSLLISQTWSGDIGDYTC
DVVSEGGNDSREARLEVIELPHSPQNLLASLNSSRSHSVTLSWVRPFDGNSPVLCYIVEL
SENNSPWKVHLSNVGPEMTSVTVSGLTPARTYQFRVCAVNQVGKGQYSAETSRLMLPEEP
PSAPPKNIVASGRTNQSIMVQWQPPPETEHNGVLRGYILRYRLAGLPGEYQQRNITSPEV
NYCLLRDLIIWTQYEIQVAAYNSAGLGVFSRAVTEYTLQGVPTAPPQNVHAEAVNSTTIR
FLWNPPPQQFINGINQGYKLLAWPPDVPEAVTVVTIAPDFHGVHHGFITHLKKFAVYLTS
ALCFTTPGDGPPSTPQLVRTHEDKPGAVGHLSFTEILDTSLKVSWQEPLEKNGIITGYQV
SWEVYGKNASRLTQTLNSSTHEYKIQGLSSLTTYTIDVAALTSVGAGLATSSTISSGVPP
DLPGPPSNLVISNISPRSATLQFRPGYDGKTAICRWIVEGQVGAIGDEEEWVSLYEEENE
PDAQVLEIPNLTPYTHYRFRMRQVNIVGSSPFSQSSRVIQTLQAPPDVAPSSITVRTASE
TSLRLRWVPLPDSQYNGNPESVGYRVRYWRPDSPSSALSQVVSDRLERELTIEALEEWTE
YELQMQAFNAIGAGPWSEVVRGRTRESVPSAAPENVSAEAISSTQILLTWASVPEQDQNG
LILGYKILFRAKDLDPEPHSQVVRGNHTQSALLAGLRKFVLYELQVLAFTRIGNGVPSSP
LILERTKDDAPGPPVRLVFPEVRLTSVRIVWQPPEEPNGIILGYQIAYRLASSSPHTFTT
VEVGATVRQFTATELAPESAYIFRLSAKTRQGWGEPLEATVITTEKRERPAPPRELLVPQ
AEVTARSLRLQWVPGSDGASPIRYFTVQVRELPRGEWQTYSSSISHEAMACAVERLRPFT
SYKLRLKATNDIGDSDFSVETEAVTTLQDVPGEPPGSVSATPHTTSSVLIQWQPPRDETL
NGLLQGYRIYYRELEFEAGSGLEAKTLKSPSALRAELTAQSSFKTVNSSSTLTTYELTHL
KKYRRYEVVMTAYNIIGESPASTPVEVFVGEAAPAMAPQNVRVTPLTASQLEVTWDPPPP
ESQNGNIQGYKIYYWEADSQNETEKMKVLFLPEPAVRLKDLSSYTKYLLSISAFNAAGDG
PRSEPQPGRTHQAAPGAPSFLAFSEITSTTLNVSWGEPVAANGILQGYRVVYEPLAPVQG
VSKVVTVDVKGHWQRWLKVRDLTKGVTYFFRVQARTITYGPELQANVTAGPAEGSPGSPK
DIVVTKSASELTLQWTEGKAGHTPTTGYVIEARPSDEGLWDMFAKDIPRSATSYTVSLGQ
LRQGVTYEFRVVAVNEAGYGEPSSPSAAVSAQAEAAFYEQWWFLLVMALSSLIIVLLVAF
ALILHGQTKKYKNCSTGKSISNMEETVTLDNGGFAALELSSRHLNVKSTFSKKNGTRSPP
RPSPGGLQYSDEDICSKYNGAVLSDSRTLKDKSVDASDSEVSDSDYEDAPPKHSFVNHYM
SDPTYYNSWKRRPPACGPTPHRYEAVAGAEASPRLHPVVTTQSYAPAPGARTPLTGFSSF
V
NT seq
6306 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagttgatgatgttccgccatacttcaagaccgagccaggcctgccccaggtt
cacctggaagggaaccgccttgtgctcacctgccttgctgaggggagctggcctttggag
ttcaagtggatgcgcaacgacagtgagctcaccgcctacagcaacgaatacaagtacgtg
attccttcgttgcagcagctcgatgccgggttctaccgctgcgtggtgcggaacagaatg
ggagcgctcctgcagaagaagtcagaagttcgagtggcatatatgggagagttcacggct
acagagcagaagaagacggtttcggaaggccacgcggcagtgctgaccttgacgcccatc
agcagccaccccaggcctcaagtgacttggttcagagaaggccacaagattatcccaagc
cacagaatagccatcacgctggacaatcagctggtgatccttgcgaccacagccagcgac
gccggagcctactacgtgcaggcggtcaacgagcgcaacggggaaaacaagacgagcccc
ttggtgcacctggacgtggcaaaacctctgcaaacccacaccccaagcccccacaagcac
actgctgggcagctcatgggcttcacccggcaccattggcccgtggaggaactgagtgtg
agttggaagagaaacggagtgagggtcaccagtggtctgcacagcttcgggcggcgcctc
accatcagcagccccacgtcggcggacacgggcgcgtacgtgtgcgaggccacgctgcga
gggggcgccttggagccggctcgggcaaaggccttcctctccatcatagagccaccatat
ttcaccactgagccggaaagtcggattttggctgaagtggaagagactgtggacattgtg
tgtcgagccatgggggtccctcttccggccctgcagtggtacaaggacgccatctccatc
aacaagctccgaaaccctcgctacaaagtgctcgccagtggaagcctgcgcatccagaag
ctgcgtccagaggattctggaatgttccagtgcttcgccagcaacgagggaggggagatc
cagacccacacctacctggccgtcaccaatgtggcccccgccttcgtccagcgtccagtg
gacaccacggtcaccgacgggatgacagccgttctgcagtgtgaggtgtctggggctccc
aaacccgccgtcacgtggaagagaggaaaccgcgttttggccagcggctctgtgcgaatc
cccaggttcatgctgcttgaatctgggggcctgcagataagtcccgtcttcatccatgat
gctggcaattacacctgccacgccgccaacacagagggctccctggacgcacgtgcggcg
ctcaccgtgtggaatcggacggccatcgtccaccctcccgaggaccgcgtggtgattaag
gggaccacggccacgctgcgctgcggagccacacacgacccccgcgtttctctccgctac
gtgtggaagaaggacagcgtgcgcctcaccccatccagcaactctagaattgtgctggag
agggacgggtccctcctcatcagccagacgtggtccggcgacattggagactacacctgt
gacgtcgtgtcggaaggagggaacgactccagggaggcacggctggaagtgattgagctg
cctcactcaccccagaaccttctggcaagcctcaactcctcgcgcagccactccgtgacg
ctgtcctgggttcggccttttgatggaaacagccctgtcctgtgctacatcgtggaactg
tcagaaaacaactccccgtggaaagtgcacctgtcgaacgtcggccccgagatgaccagc
gtcaccgtgagcggcctgacaccggcccgcacctatcagttcagggtgtgtgcggtgaat
caagtgggcaaaggccagtacagcgcagagacaagcaggttgatgttgcctgaggaacca
cccagtgctcccccgaagaacattgtggccagtgggcgcaccaaccagtccatcatggtc
cagtggcagccgcccccggaaacagagcacaacggggtgctgcgtgggtacatcctcagg
taccgcctggctggcctgcctggggagtaccagcagaggaacattaccagccccgaggtc
aactactgcctgctccgggacctcatcatctggacccagtacgagatccaggtagccgcc
tacaacagcgccgggctgggcgtcttcagcagggcggtgaccgagtacaccttgcaagga
gtgcctaccgcgcccccgcagaacgtgcacgcggaagcggtgaactccaccaccatccgg
ttcctgtggaacccgccgccgcagcagtttatcaacggcatcaaccagggatacaagctt
ctagcctggccacccgatgtccctgaggccgtcaccgtggtcaccatcgccccggatttc
cacggagtccaccacggcttcatcacccacctgaagaagttcgctgtctacctcacctca
gccctgtgcttcacgacgccgggcgacgggccacccagcacgccacagcttgtgcgcacg
cacgaagacaaaccgggggctgtgggacatctcagcttcacagagatcctggacacgtcc
ctcaaggtcagctggcaggagcccctggagaaaaatggcatcattacaggctaccaggtt
tcctgggaggtgtacgggaagaacgcctcgcgcctcacgcagactctgaacagcagcaca
catgaatacaagatccaaggactgtcatccctcaccacctacaccatcgacgtggcggca
ctcacctccgtgggcgccggcctggccacctcgtccaccatttcttctggagtgccccca
gacctcccggggccgccctccaacctggtcatctccaacatcagcccccgctcggctacg
ctccagttccggcctggctatgacggcaagaccgccatctgcaggtggattgtggagggg
caagttggagccatcggcgatgaggaggaatgggtcagcctctacgaggaggagaatgag
cctgacgcccaggtgctggagatcccgaacctcacaccgtatactcactacaggttccga
atgaggcaggtgaacatcgttggttcgagccccttcagccagtcttcccgggtcatccag
accctgcaggcccctccagacgtggctccgagcagcatcacggtccgaactgccagtgag
accagcctgcggctccgctgggtgcccctgcccgactcccagtacaacgggaaccccgag
tccgtgggctacagggtcaggtactggcgcccagactccccgtcgtccgcgctgtcccaa
gtcgtgagtgaccggctggagcgggagctgaccatcgaggctctggaggagtggacggag
tacgagctgcagatgcaggcattcaatgccatcggggctgggccctggagcgaggtggtc
cggggccgcacgcgcgagtcagttccttccgccgctccggaaaacgtgtctgccgaggcc
atcagctccacccagatcctgctgacctgggcttccgtgcccgaacaggaccagaatggg
ctcatcctgggctacaagattctgttccgagccaaggatctggaccctgagccgcacagc
caggtggtgcgagggaaccacacacagtcggcactgctggccgggctgcgcaagttcgtg
ttgtacgagctgcaggtgctggcattcacacgtatcggcaacggggtgcccagctcaccc
ctcatcctggagcgtaccaaagatgacgccccaggcccccctgtgagactggtgttcccc
gaggtgaggctcacctccgtgcgcatcgtgtggcagcccccggaagagcccaacggcatc
atcttgggctaccagatcgcctaccgcctggccagcagcagcccgcacaccttcaccacg
gttgaggtcggcgccacggtgaggcagttcacggccacagagctggcccccgagtccgcc
tacatcttcaggctgtctgccaagacaaggcagggctggggagagccgctggaggccacg
gtcatcaccactgagaagagagagcggcctgcaccacccagggagctcctggtgccccag
gcagaagtgaccgcccgcagcctccggctccaatgggtcccgggcagcgatggggcctcc
cccatccggtacttcacggtgcaggtgcgagagcttccccggggagagtggcagacctac
tcctcgtccatcagccacgaagccatggcctgcgcagttgagaggctgaggcctttcacc
tcctacaagctgcgcctgaaagccaccaacgacatcggggacagtgacttcagtgtggag
acagaggcagtgaccacgctgcaggatgtccctggagagcctccagggtccgtctctgca
acgccgcacaccacctcctcggttctgatccagtggcagcctccacgggatgagaccctg
aacggcctcctccagggctaccggatctactaccgggagctggaattcgaggcgggctca
ggcctggaggccaagacgcttaagagcccctcagctttgcgagccgagctcacagcccaa
agcagcttcaagaccgtgaacagcagctccacgctaaccacgtatgaattaacacatcta
aagaagtacaggcgctatgaagtggtcatgactgcctataacatcatcggcgagagccca
gccagcacgccagtggaggtctttgtcggcgaagcagccccagcgatggccccgcagaac
gtccgggtgaccccgctcacggccagccagctggaggtcacgtgggaccctccgcccccg
gagagccagaacgggaacatacaaggctacaagatctactactgggaggccgacagccag
aacgagacagagaagatgaaagtcctcttcctgcccgagcccgccgtgaggctcaaggac
ctgagcagctacaccaagtacctgctcagcatctcagccttcaacgctgcgggcgacggg
cccaggagtgagccccagccaggccgcacccaccaggccgctcctggagcccccagcttc
ctggccttctcagaaatcacctccaccacgctaaacgtgtcctggggggagcccgtggcc
gccaacggcatcctgcagggctaccgtgtggtgtacgaacccttggcgccggtccaaggg
gtgagcaaggtggtcacagtggacgtgaaggggcactggcagcgctggctcaaagtgcgg
gacctcaccaaaggagtcacctacttcttccgcgtccaagcccggaccatcacctacggc
ccggagctgcaggccaacgtcacggcggggccagctgaggggtccccaggttccccgaaa
gatatcgtggtcaccaaatctgcctctgaactgacgctgcagtggaccgaggggaaggct
ggccacacacccaccacgggctacgtcatagaggccaggccctcagacgaaggcctgtgg
gacatgtttgccaaggacatcccccgcagtgccacgtcctacaccgtgagcctgggccag
ctgcggcagggcgtgacctacgagttccgcgtggtggctgtgaacgaggctggctacggg
gagcctagcagcccctctgccgcggtgtcagctcaagcagaggcagcattctacgagcag
tggtggttcctcctggtgatggcgctgtccagcctgatcatcgtcctgctggtggcattc
gccctgatcttgcacggacagactaagaagtacaagaactgcagcacaggtaagagcatc
tccaacatggaggagactgtgaccttggacaacgggggcttcgccgccctggagctcagc
agccgccacctcaacgtgaagagcaccttctccaagaagaatgggaccaggtcccctccc
cggcccagccccggcgggctgcagtactccgacgaggatatttgcagcaagtacaacggc
gccgtcctcagcgacagcaggaccctcaaggacaagtcggtggacgcctccgactccgag
gtgtccgactcggactacgaggacgcaccccccaaacactccttcgtcaaccactacatg
agcgaccccacctactacaattcctggaagcgtcgtccaccggcctgcgggcccaccccg
cacaggtacgaggccgtggcaggcgctgaggccagcccgcgcctgcacccggtggtcacc
acgcagagctacgcacctgcgcccggcgcccggactccgctcaccggcttctcctccttc
gtgtga
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