Ochotona princeps (American pika): 101531149
Help
Entry
101531149 CDS
T07609
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03082
ATP-dependent chromatin remodeling
opi04714
Thermogenesis
opi05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101531149 (SMARCE1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101531149 (SMARCE1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101531149 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101531149 (SMARCE1)
03021 Transcription machinery [BR:
opi03021
]
101531149 (SMARCE1)
03036 Chromosome and associated proteins [BR:
opi03036
]
101531149 (SMARCE1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TOX
101531149 (SMARCE1)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101531149 (SMARCE1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101531149 (SMARCE1)
PBAF complex
101531149 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCN5L1
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
101531149
NCBI-ProteinID:
XP_004599181
LinkDB
All DBs
Position
19:complement(4536509..4561723)
Genome browser
AA seq
355 aa
AA seq
DB search
MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTDEEKQEYL
NEYEAEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPA
EDPDDYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMV
HQRKLEAELLQIEERHQEKKRKFLESTDSFNNELKRLCGLKVEVDMEKIAAEIAQAEEQA
RKRQEEREKEAAEQAERTQSSVVPEEEQVANKAEDKKDDENIPMETEETQLEETTESQQN
GEEGTSTPEDKESGQEGVDSMAEEGTSDSNTGSESNSATVEEPPADPIPEEDKKE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaccatcttatgccccacctcccaccccagctcctgcaacacaaatgccc
agcacaccagggtttgtgggatacaatccatacagtcatctcgcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggtcacggatgaagagaaacaagagtattta
aacgagtacgaagcagagaagatcgagtacaatgagtccatgaaggcctatcacaattcc
cccgcataccttgcttacatcaacgccaaaagtcgtgccgaggccgccctggaggaggaa
agccgacagagacagtctcgcatggagaaaggggagccctacatgagcatccagcccgcg
gaagaccccgacgattatgatgatggcttttcaatgaagcatacagccactgcccgtttc
caaagaaaccaccgcctcattagtgagatcctgagtgagagtgtggtgccagacgtgcgg
tccgtcgttacgacagctagaatgcaggtgctgaagcgacaggtccagtccctcatggtt
catcagcgaaagctggaagctgaacttcttcaaatagaggagcgacaccaggagaagaag
aggaaattcctggaaagcacagattccttcaacaatgaactcaaaaggttgtgcggtttg
aaggtagaagtggatatggagaaaattgcagctgaaattgcacaggcagaggagcaggcc
cgcaagcgtcaggaggagagggagaaggaggcggcagagcaggccgagcgcacccagagc
agcgtcgttcctgaggaagagcaagtggccaacaaggccgaggataagaaagacgacgag
aacattccaatggagacagaggagacacaactggaagaaacgacagagagccagcagaat
ggcgaagaaggcacgtccactcctgaggacaaggagagcgggcaggagggggtcgacagc
atggccgaggaaggaaccagtgacagtaacaccggctcggagagcaacagtgccaccgtg
gaggagccgccggcagaccccatcccagaggaggacaagaaagaatag
DBGET
integrated database retrieval system
