Ochotona princeps (American pika): 101531166
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Entry
101531166 CDS
T07609
Symbol
SHQ1
Name
(RefSeq) protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101531166 (SHQ1)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
101531166 (SHQ1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
Motif
Other DBs
NCBI-GeneID:
101531166
NCBI-ProteinID:
XP_012781325
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Position
9A:complement(37548782..37658230)
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AA seq
540 aa
AA seq
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MLTPAFELSQDPDFLTVAIRVPYARVSEFDVYFEGSDFKFYAKPYFLRLTLPGRIVENGS
EQGSYDADKGIFTIRLPKETPGQHFEGLNMLTALLAPRKSRTAKPLVEEIGTSEVSEEVE
EDDADDEGFDWEIEQTPYEEISENPLNPQCHYGFGNLRAGVVHRLQDELSDVIDIKDPDF
TPAAERRQKRLAAELAKFDPDHYLADYFEDEEIKQILKYKPWWTEAYSKMMAPSGTSQDQ
ELHAALVSFSEEEKYQLRKFVNKSYLLEKSAQRQVYYSLIDILLAYCYETRVTEGERNVE
SAWNIRKLSPTLCWFEKVSKSAILKCLLDIHTIFRENDPAYILNDLYISDYCVWIQKAKS
KKLAAVAEALKKVSLTKAQLGLELEELEAAALLVQREETASEAVPSVSGQQPQPCSPETD
KSESESGSTASSGSEDSDSDREELRQPSAAENSLEGPFLQESSSLLFAGRGLCGDPAIQD
SEVSQPELPASPWATAGRKPLIEELGEYLETTVQVSGAEGATAGNQGSAQQRDGQQVPSD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgccggcgttcgagctcagccaggacccggacttcctgaccgtcgccatccgc
gtgccgtacgcgcgggtctccgagttcgacgtgtacttcgaggggtcggatttcaagttc
tacgccaagccgtactttctcaggttgacccttccgggaagaattgtagagaatggaagt
gagcagggctcctacgacgcagataaaggaatttttaccattcgattgcccaaagaaaca
cctggccagcattttgaggggctgaatatgttaactgctctcctggcacccagaaaatcc
aggacggcaaaaccacttgtggaagaaatcggtacttcagaagtctctgaggaagtagaa
gaggatgatgctgatgatgaagggttcgattgggaaattgaacagactccctatgaagaa
atatcagaaaatcctttgaatccacagtgccactatggatttggaaacttaagagctgga
gtggttcaccggttgcaggatgaattgagtgatgtgattgatattaaggatccagatttt
actcctgcagctgaacggagacagaagcgcctggctgctgagctggccaagtttgatcct
gatcattatctggctgactattttgaagacgaggagattaagcagattttgaagtataag
ccttggtggactgaagcatattcaaaaatgatggccccttcgggaacaagccaggatcaa
gaactgcacgccgcgttagtgtctttctctgaagaagagaagtaccagctacgtaagttt
gtcaataagtcttacctgctggagaagagcgcccagcgccaagtgtactatagtttgatc
gacatcctcctggcgtactgctatgaaacccgtgtcacggaaggcgagaggaacgttgaa
tcggcatggaatatcagaaaactgagtccaacgctgtgctggtttgagaaagtcagtaaa
agtgccattttaaagtgtcttctggatatccacacaatttttcgggaaaatgatccagct
tacatcctaaatgatctctacatctcggactactgtgtgtggattcagaaagctaagtct
aaaaagttggcagcagttgcagaagccttgaagaaagtctcccttacaaaggcccagctg
ggcttagaactggaagagctagaagcagcagcactacttgtccagagggaagaaacggcc
tcagaagcagtcccttccgtttccgggcagcagccacagccttgcagccccgagacggac
aagtcagagtcagagtcaggcagcactgcgtcatccgggtcagaagactctgattcagat
cgagaggagctcagacagccctctgcggcagaaaactctttggaaggcccctttctgcaa
gaaagcagctcgctgctcttcgccggtcgtgggctctgcggagacccagccatccaggac
tctgaggttagccagccagagctgcctgcctctccctgggctactgcagggcgcaaacct
ctgatagaggagcttggggaatacttggagaccactgtgcaggtgtctggggccgagggc
gccacagctggaaaccagggcagtgcacagcagcgtgatgggcagcaggtgccaagtgac
tga
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