Ochotona princeps (American pika): 101531265
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Entry
101531265 CDS
T07609
Symbol
POGZ
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101531265 (POGZ)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101531265 (POGZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_1
HTH_Tnp_Tc5
zf-C2H2_4
HTH_28
HTH_23
Motif
Other DBs
NCBI-GeneID:
101531265
NCBI-ProteinID:
XP_004588948
LinkDB
All DBs
Position
13:complement(111143451..111180641)
Genome browser
AA seq
1412 aa
AA seq
DB search
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTPAVSVSQQPVSAPVPIAAHAS
VAGHLSTSTTVSSSGAQNSDSTKKTLVTLIANNNAGNSLVQQGGQPLILTQNPAPGLGTM
VTQPVLRPVQVMQNANHVTSSPVASQPIFITTQGFPVRNVRPVQNAMNQVGIVLNVQQGQ
TVRPITLVPAPGTQFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTFTTVIPATLTIRST
VPQSQSQQTKSTPSTSTTPTATQPTSLGQLAIQPPGQSNQTSNPKLAPSFPSPPAVSIAS
FVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPAVVSNNSSAHSSQRTSGPESSVKV
TSSIPVFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQKKGKSLDPEPSVPSA
AKPPSPEKTAPVASTPSSTPIPALSPPTRVPEPSENAGDAVQTKLIMLVDDFYYGRDGGK
VAQLTNFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYRQFS
TPFQLQCHLENVHSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSS
LYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCNKCRLQFLFAK
DKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPVSSSDTPPSALQEATSLTS
SADPLPVFLYPPVQRNIQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYST
CCSRAYANHMINNHVPRKSPKYLALFKNSVSGTKLACTSCSFVTSVGDAMAKHLVFNPSH
RSSSILPRGLTWLSHSRLGQIRDRMHDRNLKNMYPPTSLPPNKAATVKSAEATPAEPEEL
PPPVTQALPSPASTATPPPTPTNPQPLVLPPLAAEGTECLNVDNQEEGSLATQEPEPASG
GGSSGLGKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGK
YLSFEAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHHL
TPHARRAVAHTLPKDVAENAGLFIEFVQRQIHNQDLPLSMIVAIDEISLFLDMEVLSSDD
RKENALQTVGTGEPWCDVVLAILADGTVLPTLVFYRGQMDQPANVPDSILLEAKESGYSD
DEIMELWSTRVWQKHTACQRSKGMLVMDCHRTHLSEEVLAMLSASSTLPAVVPAGCSSKI
QPLDVCIKRTVKNFLHKKWKEQAREMADTACDSDVLLQLVLAWLGEVLGVIGDCPELVQR
SFLVASVLPGPDGNVSSPARNADMQEELIASLEEQLKLSGEQSEEPSASTPGPRASPEET
VDPESLHQLFEGESETESFYGFEEADLDLMEI
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgacctgtttatggaatgtgaggaggaggagttggagccgtggcaaaaa
atcagtgatgtcattgaggactctgtagttgaagattataattcagtggataaaactccg
gcagtttctgtgagccagcagccagtctcggctccagtgcccatcgctgcccatgcttct
gttgctgggcacctctctacatccaccaccgttagtagcagcggggcacagaacagcgac
agtacaaagaagactcttgtcacactaattgccaacaacaatgctggtaattctttggtc
cagcaaggtggacagccactcatcctgacccagaatccagccccaggtttgggcacaatg
gttactcaaccagtgctgagacctgtccaggtcatgcagaatgccaatcatgttactagt
tcccctgtggcttctcaaccaatattcatcacgacccagggatttcctgtaaggaatgtc
cggcctgtacaaaatgcaatgaatcaggttgggattgtgctgaacgtacagcaaggccaa
acggttagaccaattacactagtcccagccccaggtacccagtttgttaagccgactgtt
ggagttccacaagtgttctctcagatgacaccagtgaggccaggctccacgatgcctgta
aggcccaccaccaacacctttaccaccgtcatcccagccactctgaccattcggagcacc
gtcccacagtcccagtcccagcagaccaagtccactcccagcacgtccaccactcccact
gccacacagccgacctcattgggacagctagctattcagcctccaggccagtccaaccag
acctcaaaccccaaactcgctccctccttcccctctccacctgcagtgagcattgccagc
tttgtcactgtgaagcgacctggggttacaggtgaaaatagcaatgaagtggccaaattg
gtgaatacccttaacaccatcccgtccctgggccagagccctgggccagcagtggtatcc
aacaacagctctgcccacagctctcaaagaaccagcggacctgagtcttcagtgaaagtg
acctcttccattccagtgtttgacctccaggacggtggacgcaagatatgtccacggtgt
aatgctcaattccgtgtcactgaagctttgcgaggtcacatgtgttactgttgcccagaa
atggttgaataccagaaaaaaggaaaatccttggatcctgaacccagtgttccatcagca
gcaaagccaccgtcccctgagaagacagcacctgttgcttccacaccctcttctacccct
attcctgctctgtcaccacctaccagagtaccagagccaagtgagaatgcaggagatgct
gtccagaccaagctcattatgctggtggatgacttttattatggacgggatggtggcaaa
gtagctcagctcacaaatttccctaaggtcgccacgtctttccgatgcccacattgtacc
aagaggctaaagaacaacattcgattcatgaaccatatgaaacatcacgtagaacttgat
cagcagaatggtgaggtagatggtcatactatctgccagcactgttaccgccagttttcc
actcccttccagctccagtgtcacttggaaaatgttcatagtccctatgaatctactacc
aagtgcaagatctgtgagtgggcgtttgaaagtgagccactgtttctccagcatatgaag
gatactcacaagcctggagagatgccttatgtgtgccaggtgtgtcagtaccgctcctca
ctctactctgaggtagatgtccattttcggatgatccacgaggatacccggcatctgctg
tgcccttattgcctgaaggtcttcaaaaacggcaatgccttccaacagcattacatgagg
caccagaagagaaatgtttatcactgcaacaaatgccgcctgcagtttctctttgccaag
gacaaaattgaacacaagcttcagcaccataaaaccttccgtaaacccaagcagctggaa
ggcctgaagccgggcaccaaggtgacgatccgggcttcccgagggcagccacgaactgtc
cctgtgtcctccagtgacacacctcccagcgcactgcaggaggcgacatcactgacctcc
tcagcggacccgctgcctgtcttcctctacccccctgtccagcgcaacatccagaagaga
gctgttaggaaaatgagtgtcatgggccggcagacttgtctggagtgcagttttgagatc
ccagatttccccaatcatttccctacctatgtgcactgctctctgtgtcgctacagcacc
tgctgctcccgagcttatgccaaccacatgatcaacaatcatgttccacggaagagcccc
aaatatttggctttgtttaaaaattctgtgagtggcaccaagttggcctgcacttcgtgt
agctttgttacctctgtgggagacgccatggccaagcacttagtgttcaacccctcacac
agatccagcagcatcctgccccggggactcacttggctctctcactcaaggcttggccag
atacgcgaccgcatgcatgaccggaacttgaagaacatgtaccctcctacttccttaccc
cctaacaaagccgccactgtgaaatctgcggaggccaccccggctgagcctgaagagctc
ccgcctccagtgacccaggcactgccatcaccagcctccacggcaacccccccacccacc
cccactaacccacaacctttagtccttccacccttggccgcagaggggaccgagtgtctg
aacgttgacaaccaggaagaagggagcctggctacccaggaacctgagcctgcatctggt
ggcggtagcagtgggttgggcaagaaggagcagctctcagtgaagaagctccgagtcgta
ctgtttgccctgtgctgtaacacggaacaggcggccgaacacttccggaatccccagcgg
cgcatccggcgctggctgcgacgcttccaggcctcacagggggagaatctggagggcaaa
tacctgagctttgaggcagaggagaaactggccgagtgggtgctgactcagcgggagcag
cagctgcctgtaaatgaggagaccttgttccagaaggccaccaagataggacgttctctc
gagggcgggtttaagatctcctatgagtgggctgtgcgcttcatgttgcgccaccacctg
actccccacgcccggcgggcagtggcccacaccctccctaaggacgtggcagagaacgcc
gggctcttcatagagtttgtgcagcggcagattcacaaccaagacttacccttgtccatg
atcgtggctatcgatgagatctccttgttcctggacatggaggtgttgagcagcgatgac
agaaaggaaaacgccctgcagacagtgggcacaggggagccttggtgtgatgtagtgctg
gccattctagccgacggcactgtccttcccaccctggttttctaccgaggacagatggat
cagcctgccaacgtgccggactcgatactgctggaggcaaaggagagtggctacagcgac
gatgagatcatggagctgtggtccacccgcgtgtggcagaagcacacggcatgccagcgc
agcaaaggcatgctcgtcatggactgccaccgcacacacctatcggaggaggtgttggct
atgcttagtgcctccagcactctgcccgcagtggtcccggcaggctgcagctccaaaatc
cagccattagacgtatgcatcaagcgaactgtcaagaacttcctgcacaaaaagtggaag
gagcaagctcgggaaatggcagacactgcgtgtgattctgacgtgctgctccagctggtg
ctggcgtggctgggtgaggtgctgggcgtcattggggactgccctgagctggtgcagcgg
tccttcctggtggccagtgtgctgccaggccccgacggcaacgtcagctccccggccagg
aacgccgacatgcaggaggagctcatcgcctccttggaggagcagctgaagctgagcggt
gaacagtctgaggagccgtctgcctccacacccgggcccagggcctccccggaagagaca
gttgatcccgagagcctgcaccagctgtttgagggtgaaagtgagaccgagtctttctat
ggctttgaagaagctgacctcgatctgatggagatttga
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