Ochotona princeps (American pika): 101531270
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Entry
101531270 CDS
T07609
Symbol
SRF
Name
(RefSeq) serum response factor
KO
K04378
serum response factor
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04010
MAPK signaling pathway
opi04022
cGMP-PKG signaling pathway
opi05166
Human T-cell leukemia virus 1 infection
opi05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101531270 (SRF)
04022 cGMP-PKG signaling pathway
101531270 (SRF)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101531270 (SRF)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101531270 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101531270 (SRF)
Transcription factors [BR:
opi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
101531270 (SRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
101531270
NCBI-ProteinID:
XP_004590570
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All DBs
Position
12:40531775..40539117
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AA seq
454 aa
AA seq
DB search
GRLEREAAAAAATTPAAPTAGALYSGSEGDSESGEEEELGAERRGLKRSLSEMEMVVAGP
EASAAAAGGYGPVSGAVSGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYE
LSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPTTDQ
RMSATGFEETDLTYQVSESDSSGETKDTLKPVFTVTNLPGTTSTIQTAPSTSTTMQVSSG
PSFPITNYLAPVSASVSPSAVSSANGTVLKGTGSGPVSSGGLMQLPTGFTLMPSGAVAQQ
VPVQAIQVHQAPQQASPSRDSSTDLTQTSSSGTVTLPATIMTSSVPTTVGGHMMYPSPHA
VMYAPTSGLADGSLTVLNAFSQAPSTMQVSHSQVQEQGGVPQVFLTAPSGTVQIPVSAVQ
LHQMAVIGQQAGSSSNLTELQVVNLDATHSTKSE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ggccgcctggagcgggaggctgcagcggccgcggccacgaccccggcggcgcccaccgcg
ggggccctctacagcggcagcgagggcgactcggagtcgggtgaggaggaggagctgggc
gccgagcggcgcggcctcaagcggagcctcagcgagatggagatggtggtcgctgggccc
gaggcgtcggcggccgccgccgggggctacggacccgtgagcggggcggtgagcggggcc
aagccgggcaagaagacccggggccgcgtgaagatcaagatggagttcatcgacaacaag
ctgcggcgctacacgaccttcagcaagaggaagacgggcatcatgaagaaggcttatgag
ctgtccacgctgacagggacccaggtgctgttgttggtggccagcgagacaggccatgtg
tatacctttgccacccgcaaactgcagcccatgatcaccagtgagactggcaaggcgctg
attcaaacgtgcctcaactcgccagactcgccgccccgctcggatcccaccacggaccag
aggatgagtgccactggcttcgaagagacggatctcacctaccaggtgtcggaatcagac
agcagtggggagacgaaggacaccctgaagcccgtgttcacggtcaccaacctgccgggt
accacctccaccatccaaactgcaccgagcacctctaccaccatgcaagtcagcagcggc
ccctccttccccatcaccaactacctggcaccagtgtctgctagcgtcagccccagcgct
gtcagcagtgccaacgggactgtgttgaagggtactggcagtggtcctgtctcctctggg
ggccttatgcagctgcctactggcttcaccctcatgcctagtggggcggtggcccagcag
gtcccagtgcaggccattcaggtgcaccaggccccacagcaggcgtctccctctcgtgac
agcagcacagacctcacgcagacctcctccagtgggacagtgacgttgcccgccaccatc
atgacatcgtctgtgcccaccactgtgggcggccacatgatgtatcctagcccccatgca
gtgatgtatgcccccacctcgggcctggcggatggcagcctcaccgtgctcaatgccttc
tcccaggcgccatccaccatgcaggtgtcccacagccaggtccaagagcaaggtggtgtg
ccccaggtgttcctgacagcaccatctgggacagtgcagatccctgtctctgcagttcag
cttcaccagatggctgtgatagggcagcaggccgggagcagcagcaacctcaccgagcta
caggtggtcaacctggacgccacccacagcaccaagagtgaatga
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