Ochotona princeps (American pika): 101531377
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Entry
101531377 CDS
T07609
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101531377 (AFF3)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
101531377 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
101531377
NCBI-ProteinID:
XP_012784985
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Position
2:complement(77301660..77819773)
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AA seq
1246 aa
AA seq
DB search
MDSFDLALLQEWDLESLWGEDILSQRNEPLVVEFQSSASRCRSVYEPDRNALRRKERERR
NQETQQDVSTFASSYSLFSEPYKTNKGDELSNRIQNTLGNYDEMKDFLTDRSNQSHLVGV
PKPGVPQTPVNKIEEHFVPDSRAQTQPSSVCSTTSSTPAAVPVPQSRRSTMGWQKTGHPP
PPDGHQRSTQQGSLRTLLGDGVGRQQPRSKQVCNVEVGLQTQERPPAMAAKHSSGGHCVQ
NFPSSLASKPSLVQQKPTAYVRPMDGQEQAPDESPKLKSSTEVLSFRGVPATKAESSRTK
TKLSKFISKQAEENRAAESNSCVEEIIREMTWLPPLSAIQAPGKVEQSKFPFPNKDSQLL
SSGLTNPKKGGAEPESPDNGTSNTSMLEDDLKLSSDEEENEQQAAQRTALRALSDSTTVQ
QSSCRASVPSSKGSSSGSSSGSSSSSSDSESSSGSDSETESSSSESEGSKAAHYSSPEAE
PASSNKWQLDKWLNKVNSHKPPILVQNESHGPESGQYYPPVKDEAQDCGKLSEVCPASLR
DKESKSTCKEEQRPRTANKAPGNKGVKQKSPPAAAAAAVAVTVTTAAPPPAAPSTPVDST
PAPTRRSTGKKPTRRTERTSAGDSTNCHRPEEPVAVDSLGTSLVVPPESTKARPCGNSRT
GHRKEPRSSVTFEKRRTRGLSRIIPKSKEFIETESSSSSSSSDSDLESEQEEYPLSKVPS
SSASDQRLKEAANSISAGGGARAPVGSINARTTSDIAKELEEQFYTLVPFGRNELLSPLK
DTDEVRSLWVKIDLTLLSRIPEHLPQEPGILNAPAAKDPESTLPALDTPPEKTLPKSKRK
RKCDNEDDYREAKRAQGDKESSSRLSASTSATLSVNHCAMNINSLAIPIHKNEKMLRSPI
SPVSDASKHKYASEDLTSSGRPHGNSVLTSASSNKKPKADSQLQSHATDLTKAAHSSENI
LLHNKARPQTEPWSPGSNGHRECKRQKLIFDDMPRSADYFMQEAKRMKHKADAMVEKFGK
ALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSGPNATPEDKQL
AALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGSSGKSTGTPSPM
SPNPSPTSSVGSQGSLSSASALSPSTIISIPQRIHQMAANHVSITNSILHSYDYWEMADN
LAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNSTHLA
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacttagccctgctccaggaatgggacctcgagtcgctgtggggtgaa
gacatcttaagccagaggaacgagcccctcgttgtggagtttcagtcttcagccagcaga
tgcaggagtgtctatgagcctgatagaaatgccctccggaggaaagaacgagaaagaaga
aaccaggagacccaacaggatgtcagcacatttgcttccagttattctctgttcagtgag
ccctacaagaccaacaaaggggatgagctctccaaccggatccagaatactttaggcaat
tacgatgagatgaaagactttttaactgatcgatccaatcagagtcatcttgttggcgtc
cctaaacctggggttccgcaaacgccggtaaacaagatcgaggagcattttgttccagat
tcaagagcccagacccagccctcctctgtttgtagcaccacatcttccacgcctgcagct
gtccctgtgccacagagccggaggagcaccatgggctggcagaagacagggcacccgccg
ccccctgatggccaccagagatcaacacaacagggctctctgaggaccttgcttggagat
ggtgttggcagacagcaaccacggagcaaacaagtgtgcaacgtagaggtggggctgcag
acccaggaaaggccacctgccatggcagccaagcacagcagtggtgggcactgcgttcag
aactttccttcgtccctggcttcaaaacccagcctggtccagcagaaacctacggcgtat
gtgcgccccatggatggccaggagcaggctcctgatgaatctcctaagctgaagtcctct
acggaagtactgtccttcaggggagtcccagccaccaaggcagagtcgtccagaaccaaa
accaagctttccaagttcatctccaagcaggcagaggagaacagagctgcagaaagcaac
agctgtgttgaagaaataattcgggagatgacctggcttcccccactttctgctattcaa
gcacctggcaaagtggaacaaagcaaatttccatttccaaataaggactctcagctttta
tcttctggactcaccaatccaaagaaaggtggtgcggagccagagagcccagacaatggc
acgtccaacacatcaatgctagaagatgacctgaagctaagcagtgatgaagaggagaat
gagcagcaggcagcccagagaacagctctccgcgctctgtctgacagcaccacggtccaa
cagagcagctgcagagcctccgtgccttccagcaagggcagcagcagcggcagcagcagc
ggcagcagcagctcctccagcgactcggagagcagctctggatccgactcggagaccgag
agcagttccagcgagagcgagggcagcaaggccgcccactactccagccccgaggccgag
ccggcatcctctaacaagtggcagctggataagtggctcaacaaagtcaattcccacaag
cctcccatactggtccagaatgaaagccatggacccgagagtggccagtactaccccccg
gtgaaagacgaggcgcaggactgtgggaagctctcagaggtgtgcccagccagcctgaga
gacaaggagagcaagagcacctgcaaggaggagcagaggccaaggacagccaacaaggcg
cctgggaacaaaggagtcaagcagaagtccccaccagcagctgcagcagcggccgtggcc
gtgaccgtgaccacagctgccccaccgccggcagctcccagcaccccagtggacagcacg
ccagcacccacccgcagatccacgggcaagaaacccacacggcgcacagagaggacctca
gctggagacagcaccaactgccaccgccccgaggagcccgtggctgtagactcgctgggg
acaagcttggtggtgcccccagagtctaccaaagccaggccctgtggcaacagcagaaca
ggccaccgcaaggaaccgcgctcctctgtgaccttcgagaagaggcgtacgcgggggctg
agcagaatcatccccaaatccaaggagttcattgagacagagtcgtcctcctcatcctcc
tcctctgactcagacttggaatcggagcaggaggagtaccctctgtccaaagtgccatcc
tcctctgcaagtgaccagaggctaaaggaagcagccaacagcatcagtgccggtggcgga
gcccgggcccctgtgggctccatcaacgccaggactaccagtgacatcgccaaggagctg
gaggaacagttctacacgctggtcccctttggccgcaacgaactgctgtcccctttgaag
gatactgatgaggtcaggtctctctgggtcaaaattgacctgacactcctgtccaggatt
ccagagcacctgccccaggagccaggaatcttgaatgcccctgcagccaaggacccagag
agcacgctgccagcattggacacaccccctgaaaagactctgccaaaatccaagaggaaa
cgcaagtgtgacaacgaagacgactatcgggaggcaaagagagcccagggagacaaagag
agctcctcgcgactgagtgcctccaccagtgccactttgtctgtgaaccactgcgccatg
aacatcaacagtttggcaataccaatacataaaaatgagaaaatgctccggtcgcccatc
tcacctgtctccgatgcatcgaaacacaaatatgctagtgaggacttgacctcctccggc
cgcccacatggcaacagcgtgctcacgtctgcctcttccaacaagaagcccaaggctgac
agccagctccagtcgcatgccacagacctcacgaaagcagctcacagctctgaaaacatc
ctcctccacaacaaggcacggccgcagaccgagccctggtccccaggatctaacggccac
agggaatgcaagcggcagaagctcatcttcgatgacatgcctcgcagtgcggattatttt
atgcaagaagctaaacggatgaaacataaagcagacgcaatggtggaaaagtttgggaag
gccctgaactatgccgaagcagccttgtcgtttatcgagtgtggaaatgcgatggagcag
ggccccatggagtccaaatccccctacaccatgtactcagaaacagtggagctcatcagg
tatgctatgagactaaaaacccactcaggccccaacgccactccggaggacaagcagctg
gctgcattgtgttatcgctgtctggctctcctgtactggcggatgtttcgcctcaaaagg
gaccatgctgtcaagtattcgaaagcgctcatcgactacttcaagaattcatcgaaagct
gcccaggccccgtccccgtgggggtccagtggaaagagcactggaaccccatcccccatg
tctcccaacccctctcccaccagctccgtgggatctcagggcagcctgtccagcgccagc
gccctgtccccgtcaaccatcatcagcatcccacagcgcatccaccagatggcagccaat
cacgtcagcatcaccaacagcatcctgcacagctacgactactgggagatggccgacaac
ttggccaaggagaacagagaattcttcaacgacctggatctgctcatggggcctgtcacc
ctgcacagcagcatggagcacctggtccagtattcccagcagggcctgcactggcttcgg
aacagcacccacctggcatag
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