Ochotona princeps (American pika): 101531393
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Entry
101531393 CDS
T07609
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101531393 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101531393 (TRIP13)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
101531393 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
AAA_16
nSTAND3
AAA_25
Viral_helicase1
AAA_18
AAA_14
AAA_33
AAA_5
NPHP3_N
AAA_28
ATPase_2
Cytidylate_kin
RuvB_N
TsaE
RNA_helicase
AAA_24
DUF815
ABC_tran
AAA_30
AAA_11
NACHT
AAA_17
IstB_IS21
AAA_7
bpMoxR
TIP49
Mg_chelatase
ATPase
AAA_19
PduV-EutP
Rad17
PhoH
SLFN-g3_helicase
nSTAND1
AAA_3
NRBF2
Motif
Other DBs
NCBI-GeneID:
101531393
NCBI-ProteinID:
XP_004597958
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Position
11:complement(38544139..38558201)
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AA seq
432 aa
AA seq
DB search
MDEAVGDLKQALPCVAEVPTVHVEVLQRGGSTAKKEDVKLGVRKLLNRHNIVFGDYKWTE
FDDPFLSRNIQSVAIVDTDLKGKDSQPIDLSVCTVALHIFQLNEDGPSSENLEEETENII
AANHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVTTTLLFSDKNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTRMFQKIQDLI
DDKEALVFVLIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDQIKRHANVVILTTSN
VTEKIDVAFVDRADIKQYIGPPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQAPTVTIEGFLQALSLAVDK
QFEERKKLSAYV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggccgtgggcgacctgaagcaggcattgccctgcgtggcggaagtgcccacg
gttcatgtggaggtgctccagcgtggcggcagtacggcaaagaaagaagacgtaaaactg
ggtgtcagaaagttactcaacagacataatattgtgtttggtgattacaagtggactgag
ttcgatgatccctttctgagcagaaacatacaatctgtggctattgttgacactgacttg
aagggcaaagactcccagcccattgatttgagtgtgtgtactgttgcactccacatcttc
cagctaaatgaggatggccccagcagtgaaaatttagaagaagagacagaaaatatcatc
gcagcaaaccactgggttctgcctgcagctgaattccatgggctctgggacagcctggtc
tatgatgtggaggtcaaatcacatctcctggattatgtgacgacaaccttactcttctca
gacaagaatgtggacagcaacctgatctcctggaaccgggtggtactgctgcatggccct
ccaggaactggaaaaacctccctgtgcaaagccttagcccagaaattgaccattcgactg
tcaagcaggtaccggtatggtcagttaattgaaataaacagccacagcctcttttccaag
tggttttctgaaagtggcaaactggtcacaaggatgttccagaagatccaggacttgatt
gatgacaaagaagctctggtgttcgtgctgattgatgaggtggagagccttactgctgcc
cgcaatgcctgcagggcaggtactgagccctcagatgccattcgcgtggtcaacgccgtc
ctaacccagatcgatcagattaaaaggcacgccaacgtggtgatcctgaccacttccaac
gtcactgagaagatcgatgtggccttcgtggacagggccgacatcaagcagtacatcggg
cccccctcggcagctgccatctttaaaatctacctctcctgcttggaagagctcatgaag
tgtcagatcatatacccacgccagcagctcctgaccctccgagagctagagatgatcggc
ttcattgaaaacaacgtgtccaagctcagcctccttctgagtgaaatttcaagaaagagc
gagggcctcagtggccgggtcctgaggaagctgcccttcctggctcatgcgctgtacatc
caggcccccactgtcaccatcgagggcttcctgcaggccctgtctctagcagtggacaag
caatttgaagagagaaagaagctttcagcctacgtgtaa
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