KEGG   Ochotona princeps (American pika): 101531399
Entry
101531399         CDS       T07609                                 
Symbol
KDM5C
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
opi  Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:opi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:opi01009]
    101531399 (KDM5C)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:opi03036]
    101531399 (KDM5C)
Enzymes [BR:opi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     101531399 (KDM5C)
Protein phosphatases and associated proteins [BR:opi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     101531399 (KDM5C)
Chromosome and associated proteins [BR:opi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101531399 (KDM5C)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD ASH2L-like_WH
Other DBs
NCBI-GeneID: 101531399
NCBI-ProteinID: XP_004598376
LinkDB
Position
X
AA seq 1561 aa
MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
EEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEESSGEVKVESASPKTFLESKEEVSH
SPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE
IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLHSFGEMADSFKADYFNMPVHMVPTEL
VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMP
VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL
AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA
YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDL
NLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALA
CYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVA
LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQEAGP
HRAAGLQMTLAELLAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEAREALASLPSSPGL
LQSLLERGRQLGVEVPEAQQLQRQVEQARWLDEVKRTLAPSARRGTLAVMRGLLVAGASV
APSPAVDKARAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQ
ALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHS
WREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDL
RDPGSVIVAFKEGEQKEKEGILQLRRTNSAKPSPLASSTTAASATSICVCGQVPTGVGAL
QCDLCQDWFHGRCVSVPRLLSSPRPSPASSPLLAWWEWDTKFLCPLCMRSRRPRLETILA
LLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLARLAELRQRLQAEPR
PEEPPAYPPAPASDPLQEGGGKDIPKVQGLLENGDSVTSPEKVAPEEGSGKRDLELLSAL
LPQLTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAAQPPDLERIRTLLEL
EKAERHGSRARGRALERRRRRKVDRVGEGDDPTREELEPKRVRSSGPEAEEAQEEEELEE
ESGGEAPPAPLPTAGSPSTQENQNGLEAAALGAASGPPGPFSTLTSRLHVPCPQQPPQPQ
L
NT seq 4686 nt   +upstreamnt  +downstreamnt
atggagccggggtccgacgacttcctacccccgccagagtgcccggtcttcgagcctagc
tgggctgagttccgcgacccccttggctacatcgcaaaaatcaggcccatcgctgagaag
tcaggcatttgcaagatccgcccacccgcggattggcagccaccctttgctgtggaggta
gacaacttcaggtttactcctcgaatccagaggttgaatgagctagaggcccagacgaga
gtgaaactgaactacttggaccagattgccaaattctgggaaatccagggctcctcatta
aagattcccaatgtagaacggcggatcttggacctctacagcctcagcaaaattgtggtg
gaggaaggtggttatgaagctatctgtaaggatcgtcggtgggcccgggtggcccaacgc
ctcaactatccaccaggcaaaaacattggctccctgctgcgctcccactatgaacgtatt
gtttatccatatgaaatgtaccagtctggagccaaccttgtgcagtgtaatacacgtcca
tttgataatgaggagaaagacaaggaatacaaaccccacagcatccctctccgacagtct
gtgcagccttccaagttcaacagctatggccggcgggctaagagactacagcctgatccg
gaacctacagaagaagatattgagaagaatccagagctgaagaaacttcagatctatggg
gcaggccccaaaatgatgggcctgggcctcatggccaaggataagactctgcggaagaaa
gataaggaagggcctgagtgtcctcctactgtagttgtgaaggaggaatccagcggggaa
gtgaaggtggagtcagcctcgcccaaaaccttcctggagagcaaggaggaagtaagtcac
agcccagagccctgcaccaagatgaccatgaggcttcggaggaaccacagcaatgcccag
tttattgagtcatatgtttgccggatgtgctcccgaggagatgaggatgacaagctcctg
ttgtgtgatggctgtgatgacaactaccacatcttctgcctgctgcctcctctgcctgag
atccccaagggtgtctggcgctgtccaaagtgtgtcatggcggagtgtaagcggccccct
gaagcttttggctttgagcaggctaccagggaatacactctgcacagctttggagaaatg
gctgactcctttaaagcagactacttcaacatgcccgtgcatatggtgcccacagagctt
gtagagaaagagttctggcggttagtgaatagcattgaggaagatgtgactgttgaatat
ggggctgacatccattccaaagaatttggcagtggtttccctgtcagtgacagtaagcgg
cacctaactccggaggaggaggagtatgctaccagtggttggaacctgaacgtgatgcca
gtattggaacagtctgtactatgtcacatcaatgcagatatctctgggatgaaggtgccc
tggctctatgtgggcatggtcttttcagccttttgctggcatattgaggatcactggagt
tattccattaactacctccactggggtgagccgaagacctggtatggagtaccctcactt
gctgcagaacacttggaagaagtgatgaagaaattgacccctgaactctttgatagccag
cctgacctcctgcaccaacttgtcacactcatgaatcccaataccctcatgtcccatggt
gtgccggttgtccgcacaaaccagtgtgccggagaattcgtcatcacctttccccgtgct
taccacagtggcttcaaccaaggctacaactttgctgaggctgtcaacttttgcactgct
gactggctgccggctgggcgtcagtgcattgagcattaccgccgcctccgaagatactgt
gtcttctcccatgaggagctcatctgcaagatggctgcctgccctgagaagctggacctg
aacctggcagcagccgtgcacaaggaaatgttcatcatggtgcaggaggagcggcggctg
cggaaagccctcctggagaagggcatcaccgaggctgagcgagaggcgtttgagctgctc
cctgatgatgagcgccagtgtatcaagtgcaagaccacgtgcttcctctctgccctggcc
tgctatgactgtccagatggccttgtctgcctttcccacatcaatgacctctgcaaatgc
tccagtagccggcagtacctgcggtatcggtacaccttggatgaactccctgccatgctg
cataagctgaaggttcgggccgagtcctttgacacctgggccaacaaagtgcgagtggcc
ctggaggtggaggatgggcggaagcgcagccttgaagaactgagggcactggagtctgag
gcccgtgagcgaagatttcccaacagtgagctgctacagcgactgaaaaactgcctgagt
gaggcagaggcatgcgtgtcccgggctctggggctggtcagcggccaggaagctggcccc
cacagagcagctggtctccagatgaccctggccgagctcctcgcatttctggaccagatg
aacaacctgccttgtgccatgcaccagattggtgatgtcaagggcattctggaacaggtg
gaggcctaccaggccgaggctcgtgaggccctagcctcactaccctccagtccagggcta
ctgcagtccctgttggagagggggcggcagctgggggtggaggtacccgaggcccagcag
ctccagcggcaggtggaacaggcgcgatggctggatgaggtgaaacgcacgctggccccc
tcagcccgaagaggcaccctggctgtcatgcggggactgttggtcgcgggtgccagtgtt
gcccctagccctgctgtggataaggcccgggccgagctgcaggagctgctaaccattgct
gaacgctgggaggagaaggcccacctctgcctcgaggccaggcagaagcatccaccggcc
acgctcgaggccataatccatgaagcagaaaacatccctgtgcacctgcccaacatccaa
gctctcaaggaggctctcgccaaggcccgggcctggattgctgatgtggatgagatccaa
aatggtgaccactacccttgcttggatgacttggagggcctagtggctgtgggccgggac
ctgcctgtgggactggaggaactgagacagctggagctgcaggtactgacagcgcactcc
tggagggaaaaggcctccaagacctttctcaagaagaattcttgctacacactgctagag
gtgctctgcccgtgtgcagacgctggctcagatagcaccaagcgcagccggtggatggag
aaggagctggggttgtacaaatctgacacagagctgctggggctgtctgcgcaggacctc
agggacccaggctctgtgatcgtggccttcaaggaaggggaacagaaggaaaaagagggt
atcctgcagctgcgccgcaccaactcagccaagcccagtccactggcatcgtcgaccaca
gccgcttctgcaacttcgatctgtgtgtgtgggcaggtgccgaccggggtaggagcgctg
cagtgtgacctgtgtcaggactggttccatgggcggtgtgtttcggtaccccgcctcctc
agctccccacggcccagtcctgcctcatccccattgctggcctggtgggaatgggacacc
aaattcctgtgtccactgtgcatgcgctcacggcgcccacgcctggagaccatcctggca
ttgttggtagccctgcagagactgcctgtgcggctgcctgagggcgaggccctacagtgc
ctcacggaaagggccatcagctggcaaggccgtgccaggcaggctctggcctccgaggat
gtaactgctctgttggcacgactggctgagctccgccaacggctgcaggctgaacccagg
cctgaggagccccctgcctaccctccagcccctgcctcagatcctctccaagaaggcggt
ggcaaggatatacccaaggtccagggcttactggagaatggagacagtgtgaccagtccg
gagaaggtagcccccgaggagggctcaggtaagagagatctagagctgctgtccgccctg
ttgccgcagttgactggtcctgtgttggaactgcctgaggcaacccgggccccgctggag
gagctcatgatggagggggacctgctggaggtgacgctcgatgagaaccacagcatctgg
cagctcctgcaggctgcacagcctccggacctggagcgaatccgcacacttctggagctg
gagaaggcagagcgccatgggagccgggctcgcggccgggccctggagaggcggcggcgg
cggaaggtggatcgggttggggagggcgatgacccaacccgagaggagctagagccaaag
agggtccggagctcagggccggaggctgaggaggcccaagaggaggaggagttggaggag
gagagtgggggtgaggccccccctgcacccctccccaccgctggcagccccagcacccag
gaaaaccagaatggcttggaagcggcggcgctaggggccgcctcgggccccccgggccct
ttctccactttgacttccaggctgcatgtgccctgtccacagcagccacctcagccacaa
ttgtga

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