Ochotona princeps (American pika): 101531401
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Entry
101531401 CDS
T07609
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101531401 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101531401 (PDS5B)
03400 DNA repair and recombination proteins [BR:
opi03400
]
101531401 (PDS5B)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
101531401 (PDS5B)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
101531401 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
101531401
NCBI-ProteinID:
XP_004577604
LinkDB
All DBs
Position
8:12811502..12940915
Genome browser
AA seq
1446 aa
AA seq
DB search
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAARKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELEKPRSRKKTPVTDAEEKLGMDDLTKLVQEQKPKGIQRGRKRGHATSESD
EQPWPEDKRLKEDMLENEDEQNSPPKKGKRGRPPKPLGAGTPKEEPTLKTSKKGSKKKSG
PAEEEEEEERQSSSSEQKSKSKQHRASRRAQQRAESPETSAVESIHSTPQKGRGRPSKTP
LPSQPKKNVRVGRSKQAATKENDSSEEVEVFQGSSPVPDDAPQEETEEEEVSTVNVRRRS
SKRERR
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggctcactcaaagacaaggactaatgatggaaaaattacttatcctcctggtgtcaag
gagatctcagacaaaatatctaaagaggagatggtgagacggttaaagatggttgtgaaa
acgttcatggatatggaccaggactctgaagaagaaaaggagctttacctaaacctagct
ttacatcttgcttcagattttttcctcaagcatcctgataaagatgttcgtttattggta
gcctgttgccttgcagatattttcaggatttatgctcctgaagctccttatacatcccct
gacaaactaaaggatatatttatgtttataacacggcagttgaaagggctggaggataca
aagagcccacagttcaataggtatttttatttgcttgagaacattgcttgggtcaagtca
tataacatatgctttgaattagaagatagtaatgaaatttttacccagttatacagaaca
ttattttcagtgataaacaatggccataatcagaaagttcatatgcacatggtagacctc
atgagctctatcatctgtgaaggtgatacagtatctcaggagcttctggacacagttcta
gtaaatctggtacctgcccataagaacttaaacaagcaagcgtatgatctggcaaaagct
ttactgaagaggactgctcaagccattgaaccctatattaccaatttttttaatcaggtt
ctcatgcttgggaagacctccatcagtgatttgtcagagcatgtctttgacttaattctg
gagctctacaatattgatagtcatttgctgctttctgttttaccccagcttgaatttaaa
ttaaagagtaatgataatgaagaacgcttacaggttgttaaactacttgcaaaaatgttt
ggggcaaaggattccgaattggcttctcaaaacaagccactttggcagtgctacttgggc
aggtttaatgatatccatgtaccaatccgcctggaatgtgtgaaatttgctagccattgt
ctcatgaaccatcctgatttagcgaaggatttgacagagtatcttaaagttcggtcacat
gaccccgaggaagctattcgacatgatgtaatcgtatccatagttacagctgcacgaaag
gacattcttctcgtcaatgatcatttacttaattttgtgagagagagaacattagacaaa
cggtggcgagtacgcaaagaagccatgatgggacttgcccaaatttataagaaatatgcc
ttacaatcagcagcaggaaaagatgctgcaaaacagatatcatggatcaaagacaaatta
ctacatatatattatcaaaatagtattgatgatcgattgcttgttgaacggatctttgcc
caatatatggtcccccataatttggaaaccactgagcggatgaagtgcttgtattacttg
tatgccacactggatttaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctacttcgacatcaagtaaaggatttacttgacttaattaaacaacctaaaactgatgcc
agtgtcaaggccatattttccaaagtgatggttattacaaggaatctgccagatcctggt
aaggcacaagattttatgaagaaattcacacaggtgttagaagatgatgagaaaataagg
aaacagttagaagtacttgttagtccaacatgttcctgcaagcaggctgaaggttgtgtg
cgtgagataaccaagaagttgggcaatcccaaacaacctacaaatcctttcttggagatg
ataaagtttctcttggagaggatagcacctgtacacatcgatactgaatcaatcagtgct
cttattaagcaagttaacaaatcaatagatggcacagctgatgatgaagatgagggagtt
ccaactgatcaagccatcagagcaggccttgaactgctgaaggtactctcatttacacat
cccatctcatttcattctgctgaaacatttgagtcactcctagcgtgcctgaaaatggat
gatgagaaagtagcagaagctgcactacaaatctttaaaaatacaggaagcaaaattgaa
gaagatttcccacatatcagatcagccttgctacctgttctacatcataaatctaagaaa
ggacccccccgtcaagctaaatatgcaattcactgtatccatgcaatattttctagcaag
gagacccagtttgctcagatatttgagcctctacataaaagtctagatccaagcaacctg
gaacatctcatcacacccttggttactattggtcacattgctctccttgcacctgatcag
ttcgctgcgccgttgaagtctttggtagctactttcattgtgaaagatcttctcatgaac
gatcggcttccagggaaaaagacaactaaactttgggttccagatgaagaagtttctcct
gaaacaatggtcaaaattcaggctattaaaatgatggttcgatggctacttggaatgaaa
aacaatcacagtaaatcaggaacttctaccttgagattgttaacaacaatattgcatagt
gatggagacttgacagaacaagggaaaattagtaaaccagatatgtcacgcttgagactg
gctgctgggagtgcgattgtgaagctagcacaagaaccttgttatcatgaaatcatcaca
ttggaacagtatcagctatgtgcattagctattaatgatgagtgctatcaagttagacaa
gtatttgctcagaaacttcacaaaggcctgtcccgattacgccttccacttgaatatatg
gcaatctgtgccctttgtgcaaaagatcccgtgaaagagagacgagctcatgctagacag
tgtttggtaaaaaatataaatgtgagacgagaatatctgaagcagcatgccgctgttagt
gagaaattgttgtctcttctaccagagtatgttgttccatatacaattcaccttttggca
catgacccagattatgtcaaagtccaagatattgaacaacttaaagatgttaaagaatgt
ctttggtttgttttggaaatattaatggctaaaaatgaaaataacagtcatgcatttatc
agaaagatggtagaaaatattaaacaaacgaaagatgcccaaggaccagatgatgcaaaa
atgaatgagaaactgtatactgtatgtgatgttgccatgaatataattatgtcaaagagt
actacatacagtttggagtctccaaaggacccagtactaccagctcgttttttcactcaa
cctgacaagaatttcagtaacaccaaaaattatctgcctccagaaatgaaatcatttttt
actcctggaaaacctaaaacaaccaatgttctaggagctgttaataagccactttcatca
gcaggcaagcagtctcagaccaaatcatcacggatggaaactgtaagcaatgccagcagc
agctcaaacccaagctctcctggaaggataaaggggaggctcgatagttcggaaatggat
cacagtgaaaatgaagattacacaatgtcttcacctttgcctggaaaaaaaagtgacaag
agggacgactctgatcttgtaaggtctgaattggaaaaacctagaagtcggaaaaaaact
cctgtcacagatgcagaggaaaaattaggtatggatgacctaactaagttggtgcaggaa
cagaagcctaaaggcattcaacgaggacggaagcgaggacatgcgacctcggagtccgat
gagcagccctggcctgaggacaagaggctcaaggaggacatgctggaaaacgaggatgaa
cagaacagcccgcccaaaaagggcaaaagagggcgccctccaaaacccctgggtgccggt
acacccaaagaagaaccaactctgaaaacttctaaaaaaggaagcaaaaaaaaatcagga
cctgcagaggaggaggaggaagaagaaagacaaagtagcagtagcgagcagaagtccaag
agcaaacagcaccgggcatccaggagagcacagcagagagcagaatctccagaaactagt
gcagttgaatccatacactccacaccacagaaaggacggggaagaccatcaaaaacgcca
ttaccatcacaacccaaaaagaatgtccgtgtaggacgctccaaacaagcagctactaaa
gaaaatgattcaagtgaagaagtggaggtgttccagggtagctctcctgtccccgacgat
gctccacaggaagaaacagaggaagaggaagtttctacagtaaatgtacggcgacgaagt
tctaaaagagaaaggcgatga
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