Ochotona princeps (American pika): 101531402
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Entry
101531402 CDS
T07609
Symbol
STXBP5L
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101531402 (STXBP5L)
Membrane trafficking [BR:
opi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101531402 (STXBP5L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
101531402 (STXBP5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_IFT140_1st
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Lgl_C
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
RAB3GAP2_N
Beta-prop_NUP159_NUP214
Synaptobrevin
Beta-prop_EML
PEP5_VPS11_N
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
101531402
NCBI-ProteinID:
XP_004577920
LinkDB
All DBs
Position
14:24653347..24979808
Genome browser
AA seq
1185 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGSGSSSGINSGGGAGSGSLHPGGTAGALREEIQETLTSDYFQ
ICKTVRHGFPYQPTALAFDPVQKILAIGTRSGAIRILGRPGVDCYCQHESGAAVLQLQFL
INEGALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTERGNTH
IVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKS
KRADLRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQTTVPHGKSQREGR
KSESCKPILKVEYKTCRNSEPFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEF
LTLCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAD
CPPDLILVLYSIGVKHKKQGYSNKEWPISGGAWNLGAQTYPEIIITGHADGSIKFWDASA
ITLQMLYKLKTSKVFEKQKVGEGKQTGEIVEEDPFAVQMIYWCPESRIFCVSGVSAYVII
YKFSRHEITTEIVSLEVRLQYDVEDIITPEPETSPPFPDLSSQLPSSRSLSGSTNTVASE
GVTKDSIPCLNVKTRPVRMPPGYQADLVIQLVWVDGEPPQQITSLAVSSAYGIVAFGNCN
GLVVVDFIQKTVLLSMGIFDLYRSSELYQRQPRSPRKNRQFIADNFCMRGLSNFYPDLTK
RIRTSYQSLTELNDSPVPLELERCKSPTSDHVNGHCTSPTSQSCSSGKRLSSADVSKVNR
WGPGRPPFRKAQSAACMEIPLPLTTEETRENSYNRSRSSSISSIDKDSKEAITALYFMES
FARKNDSTISPCLFVGTSLGMVLIISLNLPIADEQRFTEPVMVLPSGTFLSLKGAVLTFS
CMDRTGGLMQPPYEVWRDPNSMDENEKSWRRKLIMNSSATQEIGDHQYIIICSEKQAKVF
SLPSQTCLYVHNITETSFILQADVVVMCNSACLACFCANGHIMIMSLPSLRPMLDVNYLP
LTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQEMCDNLQDMLGDLFTPIETPEAQNRG
FLKGLFGGSGQTFDREELFGEASAGRASRSLAQHIPGPGGIEGVKGAAGGVMGELTRARI
ALDERGQRLGELEEKTAGMMTSAEAFSKHAHELMLKYKDKKWYQF
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatttccggaaagttttggatggcttaactgcctcctccccaggcagt
ggtagcagcagtggcattaacagcggtggtggagctggcagtggttccctgcatccaggg
gggactgcaggggccctcagagaggagattcaagaaaccctgacttcagactatttccag
atctgcaagacagttcgacatggctttccgtaccaacccacagcattagcctttgatcca
gttcagaaaatcttggctattggaacaagatcaggtgctataagaatactcgggagacct
ggtgttgattgttattgccaacatgaaagtggtgcagctgttctacagctccaattcttg
atcaacgagggtgctttggtcagtgcaagttcagatgatacacttcatttgtggaacctt
agacaaaaaaggccagctattcttcattctcttaaatttaaccgagaacgaattacttac
tgtcatctacctttccagagtaaatggctctatgttggaacagaaagaggaaatacacat
attgtaaatattgaatctttcattctttctggatacgttatcatgtggaacaaggccatt
gaactgtccaccaagactcatccagggccagttgtacatttaagtgatagtccaagagat
gaagggaaactcctgataggatatgaaaatggaactgtagtattctgggatttgaaatct
aaaagagcagatttgagagtttattatgatgaggctattcattcaattgattggcatcat
gagggcaaacagttcatgtgcagccattcagatggtagcttgaccttatggaacttgaaa
agcccaagccgccctttccagaccacagttccacatggaaaaagtcaaagagaaggaaga
aaatctgaatcttgtaaaccaattcttaaagtagaatacaagacctgcagaaacagtgaa
ccattcataatattctctggtggactgtcctatgacaaagcttgcagaagaccaagttta
accatcatgcatggaaaagcaattacagtgcttgaaatggatcatcctattgttgaattt
ttaactttatgtgaaacaccctatccaaatgaatttcaggaaccgtatgctgtagtggtg
cttctggaaaaagatctcattgtagttgatctgacacaaagcaattttcccatctttgaa
aatccgtatcccatggatattcatgaatcaccagttacatgcactgcatattttgctgat
tgccctccggatttgatcttggtgctctattctataggagtcaagcataaaaagcaagga
tacagtaataaggaatggccaattagtggaggagcttggaatcttggagcacaaacatat
ccagaaatcattattactggtcatgcagatggatcaataaaattttgggatgcttctgca
ataactctacaaatgctctacaaactaaaaacttcaaaagtttttgaaaagcagaaggta
ggagaaggaaaacaaacaggagaaattgtggaggaggacccttttgctgtgcagatgatt
tactggtgtccggagagcagaatattctgtgtatcaggagtctctgcatacgtcataatt
tataaattcagtagacatgaaattacaacagaaatagtgtcattagaagtacgacttcag
tatgatgttgaagatattatcactcccgaaccagaaacaagtcctccatttccagatctc
tcatcccagcttccatcttcaaggagtctttccgggagcaccaacactgtggctagtgaa
ggagtaacaaaggacagtattccatgcctcaatgtgaagaccagaccagtgcgaatgcct
ccagggtatcaagccgacctcgttattcagttggtgtgggtagatggtgaacctcctcaa
caaattactagtcttgctgtaagttcagcatatggaatagttgcttttgggaattgcaat
ggattagttgtggtggattttatacagaagacagtactgctaagcatgggaatctttgat
ctatatagatcaagtgaactgtaccagcgacaaccacggtctcctcgtaagaacaggcaa
ttcattgcagacaacttttgcatgcgtggcctgtctaacttttatcctgatttaacgaaa
cggatccgtacttcctatcagagtttaactgagctgaatgacagtcccgtccccctggaa
ctggagcgctgcaagtctcccacttcagaccatgtaaatggacattgcacaagtccaact
tctcagagctgcagttctggaaaacgtctttctagtgctgatgtttctaaagttaatcgc
tggggtcctggaagaccaccatttcgaaaggcacagtcagctgcttgcatggagatacct
ttaccacttacaacagaagaaacccgtgaaaattcctataatcgttccagaagctctagt
atctccagtattgacaaagattctaaggaagccatcacagcgttatacttcatggaatcc
tttgcacggaaaaacgactccaccatctccccttgtctgtttgttggaactagtctggga
atggtgttaatcatatccctaaacctgccaatagcagatgaacaaaggtttacagaacca
gtcatggtattgccaagtggtacattcctctcattgaaaggagccgtgctaactttctcc
tgtatggaccgaactggaggattaatgcagccaccatatgaagtttggagggatccaaac
agcatggatgaaaatgaaaaatcctggagaaggaaactgatcatgaactcctctgcaacc
caagaaataggagatcatcagtatataataatatgctccgaaaaacaagccaaagtcttc
tcactgccttctcagacttgcctttatgttcataacatcactgagacatcttttatattg
caggcagatgtggtggtcatgtgtaacagtgcctgcttggcatgcttttgtgctaatggg
catattatgataatgagcctacctagtcttcgaccaatgttggatgttaattatttaccg
ctgacagacatgcggatagcacggacattttgttttaccaatgaggggcaggctttatat
cttgtctcccctactgaaattcagcggttaacctacagccaagaaatgtgtgacaatcta
caggatatgctaggagatttgtttactcccatagagacaccagaagctcaaaacagaggt
tttcttaagggactatttggtggaagtggacaaacctttgaccgggaagagctctttggg
gaagcttctgcaggaagagcatcgcgtagtcttgcacaacacattcctggaccaggtgga
atagaaggggtgaagggtgctgctggaggggtgatgggagagctgacccgggcacgaatt
gcactggatgagagaggacagagattaggagagctggaagagaaaactgcaggcatgatg
acaagcgcagaagccttttccaaacatgcacatgagttaatgctgaaatacaaggataag
aaatggtaccaattctaa
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