Ochotona princeps (American pika): 101531703
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Entry
101531703 CDS
T07609
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04151
PI3K-Akt signaling pathway
opi04510
Focal adhesion
opi04512
ECM-receptor interaction
opi05145
Toxoplasmosis
opi05146
Amoebiasis
opi05165
Human papillomavirus infection
opi05200
Pathways in cancer
opi05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101531703
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101531703
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101531703
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101531703
09162 Cancer: specific types
05222 Small cell lung cancer
101531703
09172 Infectious disease: viral
05165 Human papillomavirus infection
101531703
09174 Infectious disease: parasitic
05146 Amoebiasis
101531703
05145 Toxoplasmosis
101531703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
F5_F8_type_C
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-GeneID:
101531703
NCBI-ProteinID:
XP_004598639
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Position
7A:complement(15141958..15205200)
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AA seq
1786 aa
AA seq
DB search
MGLLQVLICSLLALCRVQVDAQEPEFSYGCAEGSCYPATGDLLIGRSQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICDSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGQTWGVYRYFAYDCESSFPGVSTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMC
RHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLATGNVSGG
VCDECQHNTMGRNCEQCRPFYYQHPERDIRDPNVCEQCSCDPAGSQNEGICDSYTDFAAG
LIAGQCRCKPYVEGEHCDVCKEGFYGLSATDPFGCQSCACNPLGTIPGGNPCDSETGYCY
CKRLVMGQRCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSPESGQCTCRPHMIGRQC
NEVESGYYFTTLDHYIYEAEEGNLGPGVSIVERLYIQDRTPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGKIPASSRCGNTVPDDDNQVVSLSPG
SRYVVLPRPVCFEKGMNYTVRLELPQYTSSDSGVDSPYTLIDSLVLMPYCRSLDIFTVGA
SGDGVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECNPQGS
LSSVCDPNGGQCECRPNVVGRTCDRCAPGTFGFGPSGCKPCECHLQGSVNAFCDAITGQC
QCFHGVYARQCDRCLPGYWGFPACQPCQCNGHADDCDSVTGQCLGCQDYTTGHNCERCMA
GYYGDPIIGSGDHCRPCPCPDGPGSGRQFAGSCYQDPVTLQLACVCEQGYIGSRCDDCAS
GYFGNPSDVGGSCQPCQCHHNIDTTDPEACDKETGQCLKCLYHTEGDHCELCRFGYYGDA
LRQDCRKCVCNYLGTIQEHCNGSNCQCDKGTGQCPCLPNVVGQNCDHCAPNTWQLASGTG
CEPCGCNDLHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE
TPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPSCTPCHQCFALWDVIISELTNKTHRF
LERAKALKISGVIGPYRETVDSIEKKVNDIKDILAQSPAAEPLKNIGNLFEEAEKLSKDV
TEKMAQLEVKLSDTAEQSNSTTRELDSLQAEAESLGNTVKELAEQLEFIKNSDVRGALDS
INKYFQMSLEAEERVNASTTDPNSTVEQSALIRERVEDLMMEQESRFREKQEEQARLLDE
LAGKLQSLDLSAAAETTCGTPPGASCSETECGGPNCRTDDGEKKCGGPGCGGLVTVAHNA
WQKAMDFDQEVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDKSNEDL
RNLIKQIRDFLTQDSADLDSIEAVANEVLKMEMPSTPEQLQNLTEDIRERVESLSQVEVI
LQQSAADIARAETLLEEAKRASKSATDVKVTTDTVKEALEEAEKAQIAAEKAIKQADEDI
QGTQNLLTSIESETAASEETLFNASRRISELERNMEELKRKAAQNSGEAEYIEAVVQSVK
QSADEIKKTLDGELGEKYKQAENIVAKKSEESADARRKAEMLQNEAKTLLAQANSKLQLL
KDLERKYEENQKKLEDKAQELMRLEGQVRSLLKDISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggctcctccaggtgttgatctgcagtctcttagcactgtgccgagtccaagtggac
gctcaggaacccgagttcagctatggctgtgcggaaggcagctgctaccccgccacgggt
gacctcctcattggccgctcgcagaaactgtccgtgacctctacctgcgggctgcataag
ccggagccttactgtatcgtcagccacttgcaggaggacaagaagtgcttcatatgcgat
tcgcaagacccttatcatgagaccctcaaccctgacagccatctcattgagaacgtggtc
acgaccttcgctccaaaccgccttaagatctggtggcaatctgaaaacggtgtggaaaat
gtcactatccaactggatctggaagcagaattccattttacgcatctcataatgacattc
aagacattccgtccggctgctatgctgatagaacgatcgtctgattttgggcagacctgg
ggcgtgtacagatactttgcctatgactgtgagagctcatttccaggcgtttcgacgggt
cctatgaagaaagttgacgatatcatctgtgattcccgatattccgacatcgagccctcg
acagaaggagaggtgatatttcgtgctttagatcctgctttcaaaatagaagacccatac
agcccaaggatacagaatctgttgaaaatcaccaacttgagaatcaagtttgtgaaactg
catactttgggagataaccttctggattctagaatggaaattagagaaaagtactactac
gctgtctatgacatggtagttcgaggaaactgcttctgctacggccatgccagtgaatgt
gcccctgtggatggattcaatgaggaagtggaaggaatggtgcatggccactgcatgtgc
aggcataacaccaagggcctgaactgtgagctgtgcatggatttctaccatgacttaccg
tggagacctgccgaaggtcgaaacagcaatgcctgcaaaaagtgcaactgcaacgagcac
tccagctcgtgtcactttgacatggcggtgtacctggccactggcaacgtcagcggaggc
gtatgcgatgagtgtcagcacaacaccatgggacgcaactgtgagcagtgcagacccttc
tactaccagcacccggagagggacatccgagatcctaatgtctgtgaacaatgttcatgt
gatccagctggttctcagaacgaaggaatctgtgatagctacactgactttgctgctggt
ctcattgccggccagtgtcggtgtaaaccgtacgtggaaggagaacattgtgatgtttgc
aaggaaggcttctatggcttaagcgccacagacccatttggttgtcagtcctgtgcttgc
aatcctttgggaaccattcctggtgggaatccttgtgactcggagactgggtactgctac
tgcaagcgtctggtgatgggacagcgctgtgaccagtgtctgccagagcactggggctta
agcaatgatctggatggatgtcgaccttgcgactgtgaccttgggggtgccttaaacaat
agttgctctccggagtcaggccagtgcacgtgtcggccccacatgatcggacgtcagtgc
aacgaagtggagtctggatactactttaccacattggatcactacatctacgaggcagag
gagggcaatctgggcccgggggttagcatagtggagcggctgtatatccaggaccgcact
ccctcctggactggagctggcttcgtccgagtgcctgaaggagcttatttggagtttttc
attgacaacataccgtattctatggagtatgacatcttgattcgctatgagccccagctg
cccgaccactgggaaaaggctgtcatcaccgtgcagcgacctggaaagattccagccagc
agccgctgcgggaacactgttccggatgatgacaaccaggtggtgtcgttatcacccggc
tcaaggtatgtggtcctccctcgccccgtgtgctttgagaagggcatgaactacaccgtg
aggctggagctgccgcagtacacctcctccgacagtggcgtggacagcccgtacacgctc
attgattctcttgttctcatgccctactgccggtcgctggacatcttcaccgtgggagcg
tcaggagatggagtggtgaccaacagtgcctgggagaccttccagaggtaccgctgcctg
gagaacagccgtagtgtcgtgaaaacgcccatgacggacgtttgcagaaacatcattttt
agcatttctgccctgctgcaccagactggcctggcttgtgaatgtaaccctcagggctcc
ttgagttccgtgtgtgaccccaacggaggccagtgcgagtgtcggccaaatgtggtggga
cgaacctgtgacagatgtgccccaggaacctttggctttggccccagcggatgcaaacct
tgtgagtgccacctgcaaggatcggtcaatgccttctgtgacgccatcacgggccagtgc
caatgtttccacggggtatatgcacggcagtgtgaccgatgcttacctgggtactggggc
tttcctgcctgccagccctgccaatgcaatgggcatgcagatgactgtgactcggtgacg
gggcagtgcctgggctgccaagactacaccacaggtcacaactgtgaaaggtgcatggct
ggttactatggcgaccccatcattgggtcaggagatcactgccgcccgtgtccttgccca
gatggcccaggcagtggccgccagtttgctggaagctgttaccaggatcctgttacttta
cagcttgcttgtgtttgtgaacagggatatattggctccaggtgcgacgactgtgcctcc
gggtactttgggaatccctcggacgtgggtgggtcgtgccagccctgccagtgccaccac
aacattgacacaacagacccagaagcctgtgacaaggagacgggacagtgcctcaagtgc
ttgtaccacactgaaggggaccattgtgagctgtgtcgctttggctactatggagatgct
ctccggcaggactgcaggaagtgtgtctgcaactacctgggcaccatacaggagcactgc
aatggctccaactgccagtgcgacaaaggcactggccagtgcccgtgccttccaaacgtg
gtgggacagaactgtgaccactgtgcacccaacacctggcagctagccagtggcaccggc
tgtgagccctgtggctgcaatgacctgcattccttcgggccatcttgtaatgagttcaca
gggcagtgccagtgcatgcctggctttggaggccgtacctgcagtgagtgccaggagctc
ttctggggagaccctgacgtggagtgccgagcctgcgactgtgaccccaggggcatcgag
acgccgcagtgtgaccagtccacgggtcagtgtgtctgcgtggagggcgttgagggtccc
cgttgcgacaagtgcacccgtgggtactcgggggtgttccccagctgcacaccctgccac
cagtgcttcgctctctgggacgtcatcatctccgagctcaccaacaagacccacagattc
ctagaaagagccaaggccttgaagatcagcggcgtgatcgggccctaccgggagaccgtg
gactccatagagaagaaggtcaacgacataaaagacatcctggcccagagccccgcggct
gagccactgaaaaatatcgggaatctcttcgaggaagcagagaaactcagcaaagatgtt
acagagaagatggcccagctagaagtgaagttatctgatacggctgagcaaagcaacagc
acgaccagagagctggactctctgcaggcagaggcggagagtctcggcaacacagtgaaa
gaacttgctgaacaactcgagtttatcaagaactctgatgttcgaggtgccttggatagc
attaacaagtattttcagatgtccctggaggcggaggagagggtgaatgcctccaccaca
gatcccaatagcaccgtggagcagtcggctctcatacgggaaagagtggaagacctgatg
atggagcaagaatcccggttcagagaaaagcaagaggagcaggctcgccttcttgatgaa
ctggcaggcaaactacagagcttagacctttcagctgctgccgagacgacctgtggcacg
cctccaggagcctcctgttccgagactgagtgtggcggccccaactgcagaactgacgat
ggagaaaagaagtgtggagggcctggctgtggcgggctggtcaccgtggcccacaacgcc
tggcagaaagccatggattttgaccaagaagtcctgagtgcactggccgaagtggaacag
ctctccaagatggtttctgaagccaaactgagggcagatgaagcaaaacagaatgctcaa
gatgttttgttgaaaactaacgctaccaaagaaaaagtggacaagagcaacgaggatctg
agaaacctaatcaagcaaatcagagactttctgacacaggacagtgctgatctggacagc
atcgaagcggtggcaaacgaagtactgaaaatggaaatgcccagcaccccggagcagtta
cagaacctgacggaagatatccgggagcgggtggagagcctttcgcaagtagaggtgatt
ctacagcaaagtgcggctgacattgccagagctgagacgctgttagaagaagctaaaagg
gccagtaaaagcgcaactgatgtcaaagtcaccacagacacagtaaaggaagctctagaa
gaagcagaaaaagcccagattgctgcggagaaagcaatcaaacaggcggacgaagacatc
caagggacccagaacctgctgacctcaattgagtctgagacagcagcttcggaggagacc
ctgttcaacgcctcccggcgcatcagtgagctggagagaaacatggaagaactgaagcgg
aaggctgcccagaactccggagaggctgaatatattgaagcagtagtgcagtctgtgaag
cagagcgcggatgaaattaagaagactctcgacggtgaacttggggaaaagtacaagcaa
gcagaaaatatagttgctaaaaaatctgaggagtcagctgacgccagaaggaaagcggag
atgctgcaaaatgaagcaaaaacacttctggctcaagcaaacagcaagctgcagctgcta
aaagatttagaaagaaaatatgaggaaaatcaaaaaaaattagaagataaagctcaagaa
ctcatgaggttggaaggccaggtccgttcgctcctaaaggacataagccaaaaagttgct
gtttacagcacctgcttgtaa
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