Ochotona princeps (American pika): 101531743
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Entry
101531743 CDS
T07609
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha isoform X1
KO
K05236
coatomer subunit alpha
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101531743 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opi04147
]
101531743 (COPA)
Membrane trafficking [BR:
opi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
101531743 (COPA)
Exosome [BR:
opi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101531743 (COPA)
Exosomal proteins of bladder cancer cells
101531743 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
101531743
NCBI-ProteinID:
XP_004589140
LinkDB
All DBs
Position
13:complement(119766911..119814912)
Genome browser
AA seq
1233 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLHYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHEHSYPLPLTAIVICNRKLDALCNIHENIRVK
SGAWDESGVFIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLT
IDPTEFKFKLALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSL
ALECGNIEIALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITG
NLEKLRKMMKIAEIRKDMSGHYQNALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEA
ESLKETFDPEKETIPEIDPNAKLLQPPAPIMPLDTNWPLLTVSKGFFEGSIASKGKGGAL
AADIDIDTVGTEGWGEDAELQLDEDGFVEATEGLGDDALGKGQEEGGGWDVEEDLELPPE
LDIPPGAAGGAEDGFFVPPTKGTSPTQIWCNNSQLPVDHILAGSFETAMRLLHDQVGVIQ
FGPYKQLFLQTFARGRTTYQALPCLPSMYGYPNRNWKDAGLKNGVPAVGLKLNDLIQRLQ
LCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMEIERK
KLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAAAFARRLLEL
GPKPEVAQQTRKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGAC
YSPEFKSQICRVTTVTEIGKDVIGLRISPLQFR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaaattcgagaccaaaagcgcgcgggtcaaagggcttagttttcaccccaaa
agaccctggatcctgactagtttacacaatggggtcatccaattatgggactatcgaatg
tgcacactcattgacaagtttgatgagcatgatggtccggtgcgaggcattgactttcat
aagcagcagcccctgtttgtctctggaggtgatgactataagatcaaggtttggaattac
aagcttcggcgctgtctttttacattgcttgggcacttagattatatccgcaccacattt
ttccaccatgaatatccatggattctgagtgcttccgacgatcagaccatccgggtgtgg
aactggcagtctaggacctgcgtctgtgtgttaacagggcataaccattacgtaatgtgt
gctcagttccatccctcggaagacctggttgtatcagccagcctggaccagactgtgcgc
gtttgggatatttctggtctaaggaaaaaaaacttatcccctggtgcagtggaatcggat
gtgagaggaataactggggttgatctgttcggaactacggatgcagtggtgaaacatgta
ctggagggtcatgatcgtggagtaaactgggctgccttccaccccaccatgccccttatt
gtttcaggggcagatgaccgccaagtgaagatctggcgcatgaatgagtcaaaggcgtgg
gaggttgatacctgccggggccattacaacaacgtgtcctgtgctgtcttccaccctcgc
caagagttgatcctcagcaattctgaggataagagtattcgagtctgggatatgtctaag
cggactggagttcagaccttccgcagggaccatgatcgtttctgggtccttgctgctcac
cctaatcttaacctgtttgcagcaggccatgatggtggcatgattgtgtttaagctggaa
cgagagcgaccagcttacgctgttcatggcaatatgctgcattatgtcaaggaccgattc
ttacggcagttagatttcaacagttccaaagatgtggctgtgatgcagttgcgtagtggt
tccaagtttccagtattcaacatgtcatacaatccagcggaaaatgctgtcctactgtgt
acaagagccagcaatttagagaacagtacctatgacctgtacaccatccccaaggatgcg
gattcccaaaatcctgatgcccctgaaggaaaacggtcctcaggcctgacagccgtttgg
gttgctcgtaatcgatttgctgtcctggatcggatgcattcgcttctgatcaagaatcta
aagaatgagatcaccaagaaggtacaggtgcccaactgcgatgagatcttctatgctggc
acaggcaatctcctgcttcgagatgcagactccatcacactctttgatgtacagcagaaa
cggactctggcatctgtgaagatttccaaggtgaaatatgtgatttggtcagcagacatg
tcccatgtagcactactggccaaacatgagcactcataccctttgcctcttacagccatt
gtgatctgtaaccgcaaactggatgctctgtgtaacatccatgagaacattcgtgtcaag
agtggggcatgggatgagagtggggtgtttatctataccacaagcaaccacatcaagtat
gctgtcaccactggggaccacgggatcatccgaactttggatttacccatctatgtcacc
agggtgaaaggtaacaatgtatactgcctagacagagaatgtcgtcctcgggtactcacc
attgatcccactgagttcaagttcaagctggctctgatcaacagaaaatatgatgaggtc
ctgcacatggtgaggaatgcgaaactagtaggccagtctatcattgcctacctccaaaag
aagggctatcctgaagtagcactgcatttcgtcaaggatgagaaaactcgcttcagtctg
gcattggagtgtggaaatattgagattgctctggaagcagccaaggctctggatgacaag
aactgctgggagaagctgggtgaagtcgccctgcttcaggggaaccatcagattgtggaa
atgtgctaccagcgcaccaaaaactttgacaaactttccttcctataccttatcactggc
aatttggagaaacttcgcaagatgatgaagattgctgagatccgcaaggacatgagtggc
cattatcagaatgccctatacctgggtgatgtgtcagagcgagtgaggatcctgaagaac
tgtgggcagaagtccctggcctatctcacagctgctacccatggattggatgaagaagct
gagagcctgaaggagacatttgacccagagaaggagacaatcccagaaattgaccctaat
gccaagctgcttcagccacctgcacctatcatgccactggataccaactggcccttattg
actgtgtccaagggattctttgaaggctccattgccagcaaggggaaaggaggagcattg
gctgccgacattgacatcgatactgtgggcactgaaggctggggagaagatgcggagctg
cagctggatgaagatggatttgtggaagccacagaaggtttgggagatgatgctcttggc
aagggacaggaagaaggaggtggctgggatgtagaagaggacctggagctccctcctgag
ctggatatacccccaggggcagctggtggggctgaagatggattcttcgtgcccccgaca
aagggaacaagtcctactcagatctggtgcaataattctcagcttccagttgatcacatt
ctggcaggttcttttgaaacagccatgcggctccttcacgaccaggtaggggtgatccag
tttggcccctacaagcaactgttcctacagacatttgcccgaggccgtactacttaccag
gctttgccctgcctgccctccatgtatggctaccctaatcgcaattggaaggatgcagga
ttgaagaatggtgtgccagcggtgggcctgaagcttaacgacctcattcaacggttgcag
ctgtgctaccagctcaccacagttggcaagtttgaggaggctgtggaaaaattccgttct
atcctcctcagtgtaccacttcttgttgtggacaataagcaggagattgcagaggcccag
cagctcattaccatttgccgtgaatacattgtgggcttgtcaatggagatagaaagaaag
aagcttcccaaagagaccctagagcagcagaagcgcatctgtgagatggcagcctatttc
acccactcaaacctgcaacctgtgcacatgattttggtcctgcgtacagctctcaacctc
ttcttcaagctcaagaactttaagacagctgccgcctttgctcggcgcctgctggaactt
gggcccaagcctgaggtggctcagcagacccgaaaaatcctgtctgcctgtgagaagaat
cccacagatgcctgccagctcaattatgacatgcacaacccttttgatatttgtgctgcc
tcttaccggcccatctaccgagggaagccagtggagaagtgtcctctcagtggggcctgc
tattccccggagttcaagagtcagatctgcagagtcaccactgtgacagagatcggcaaa
gatgtgattggtctaaggatcagtccgctgcagtttcgctaa
DBGET
integrated database retrieval system
