Ochotona princeps (American pika): 101531859
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Entry
101531859 CDS
T07609
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101531859 (SHANK2)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
SAM_4
Motif
Other DBs
NCBI-GeneID:
101531859
NCBI-ProteinID:
XP_004598291
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All DBs
Position
1:complement(110989935..111301659)
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AA seq
1823 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDDSGGSETDSSKEETVYDSIRARAEKPGGARVDESQASTLVIR
VVIPDLQQTKCIRFDPDATVWVAKQRILCTLTQSLKDVLNYGLFQPASNGRHGKFLDEER
LLREYPQPTGAGVPSLEFRYKKRVYKSSLDEKQLAKLRSKSNLKKFMDHVQHRLVEKIAK
MLDRGLDPNFHDLETGETPLTLAAQLDDPTEVIKALRNGGAHLDFRAKDGMTALHRAARC
RNAAALKTLLELGASPDYKDSYGLTPLYHTAIVGGDPYCCELLLHEHASVCCKDENGWHE
VHQACRYGHVQHLEHLLFYGADMSAQNASGNTALHICALYNQDSCARVLLFRGGNKELKN
YNSQTPFQVAIIAGNFELAEYIKNHKETDVVPFREAPAYSNRRRRPPNTLAAPRVLLRSN
SDNNLNASAPAWAVGPAAPAHRSLSPQLLQQMPGKPESAVKTLASYIPGPRSRSPSLNRL
GGANEDSTRSQPHWHVGSPFAPGPSKDALSASEYPGPRRKLYSAVPGRLFVVVKPYQPQV
DGEIPLHRGDRVKVLSIGEGGFWEGSARGHVGWFPAACVEEVQCKPKDSQAETRVDRSKK
LFRHYTVGSYDSFDAASDCLIEEKTVVLQKKDSEGFGFVLRGAKADTPIEEFTPTPAFPA
LQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLLLKVVTVSR
NLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELVDKASVRKKKDKPDEVLPVAKP
SRTAENVAVESRVATIKQRPTSRCFPATSDMNSVYERQGIAVMTPTVPGSPKGPFLGLPR
GTMRRQKSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQAVPPSPPPP
SPTTYNCPKSPTPRVYGTIKPAFSQNPAAKVSPATRSDTVAAVMRDKGVFYRRELDRYSL
DSEDLYSRTAAPQATFRSKRGQMPENPYSEVGRIASKAVYVPAKPARRKGMLVKQSNVED
SPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSVEIDPQAAEPPGPLRPDDTLTVSSPFAAA
IAGAVRDREKRLEAKRNSPAFLSTDLGDEDVGLGPPAPRIRPPEFPEEGDFGDEEGAEQL
TPPTPGAVSREPEDHLTGGGEAGTQGEAGRPLNPPPKAKGPEGSPTAESYVHPLTGRLLD
PSSPLALALSARDRAMKESQQGPKGEAPKADLNKPLYIDTKMRPSVDAGFPPVTRQNTRG
PLRRQETENKYESDVGKERPMLIDIVDTSQRKPAGLLMVHTVDAAKADGALEEEDESADL
EPDDSPPEVPEGISETEGALQIAAAPEPPATPGRTIVAAGSVEEAVILPFRIPPPPLASL
DLDEEFIFTEPLPPPLEFANSFDIPDDRVASVPALTDLVKQKRNDGAPTPSLSSADGKKP
ASLSNCLPASLLPPPESFDAVADSGIEEVDSRSSSDHHLETTSTISTVSSISTLSSEGGE
NADTCTVYADGQAFVVDKPPVPPKPKVKPIIHKSNALYQDALLEEDADGCGVPPPAPPPP
PGGIPPAIAKVLQPRTSKLWGDVTEVKGPILSGPKANVISELNSILQQMNREKAVKPGEG
LDSLAGAKSASLAARSPEVMSTVSGTRSTTVTFTVRPGTSQPITLQSRPPDYESRTSGPR
RAPSPVVSPTELSKELLPAPLSAAASPSPALSDVFSLPSQPPSGDLFGLNPAGRSRSPSP
SILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKETFLDNEIDGSHLPNLQKEDLI
DLGVTRVGHRMNIERALRQLLDR
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcagcccgacgtccagcgaggacgagatggcccagagcttctcggacgactcc
gggggctccgagacggacagctccaaggaggagaccgtctatgactccatccgggccagg
gcggagaagccgggcggggcacgcgtcgatgagagccaggcaagcacgctggtcatccgt
gtggtcatcccggacctgcagcagacgaagtgcattcgcttcgacccggacgccaccgtg
tgggtggccaagcagcggatcctgtgcaccttgacccagagcctgaaggacgtgctcaac
tacgggctgttccagccggccagcaatgggcgccacggcaagttcctggatgaggagcgg
ctcctgcgcgagtacccgcagcccacaggcgcgggcgtgccctcgctggagtttcggtac
aagaagcgggtgtacaagtccagcctcgacgagaagcagctggccaagctccggtccaag
tcgaatctgaagaaattcatggatcatgtccagcaccgattggtggagaagattgccaag
atgcttgaccgaggcctggatcccaacttccatgacctggagaccggagagaccccgctg
acccttgctgctcagctggacgaccccactgaggtcatcaaggctttgaggaacggcggg
gcgcacctggacttccgcgccaaagacgggatgaccgccctgcaccgcgctgcccgctgc
cgcaacgctgcggccctgaagacgctgttggagctcggggcctcccccgactacaaggac
agctacggcctcacgcccctgtaccacacagccatcgtgggcggcgacccctactgctgc
gagctcctgctgcatgagcacgccagcgtgtgctgcaaggatgagaacggctggcacgag
gtgcaccaggcctgcaggtacgggcacgtgcagcacctggaacatctgctcttctatggg
gccgacatgagcgcccagaacgcctcggggaacacggccctgcacatctgcgccctctac
aaccaggacagctgtgccagagtgctgctattccgagggggaaacaaggagttgaaaaac
tacaacagccagacgccattccaggtggcgatcatcgcgggcaacttcgagctggccgag
tacatcaagaaccacaaggagactgacgttgtgcccttccgagaggccccggcctactcc
aaccgcaggcggcggccccccaacacactggctgccccccgggtcctgctgcgttccaac
agtgacaacaacctcaatgccagcgcgcccgcctgggccgtgggccccgcggcccccgcc
caccgcagcctgtcgccccagctgctgcagcagatgccaggcaagccagagagcgccgtg
aagacccttgcgagctacattcctgggccccgcagccggtccccgtcactcaacagactg
ggcggtgccaacgaagacagcacgcggtcccagccgcactggcacgtggggtcacctttt
gctcctggtcccagcaaggatgccctctcagcttctgagtacccggggcccaggaggaag
ctctacagcgcggtgcccggcaggttgttcgtcgtcgtcaagccataccaaccccaagtc
gatggcgaaatccccctgcaccgcggtgacagggtcaaagttcttagcatcggcgaaggc
ggcttctgggaaggcagcgcccgtggccatgtcgggtggttcccggcagcgtgcgtggag
gaggtgcagtgcaaacccaaggacagccaggcagagacccgcgtggaccgcagcaagaag
ctctttaggcactacacagtcggctcctacgacagctttgacgcggccagcgactgcctc
atcgaggagaagacggtggtgctgcagaagaaagacagcgagggcttcggcttcgtgctc
cggggggccaaagccgacacgcccattgaagaattcacacccacgccggcattcccagcc
ctgcagtacctggagtccgtggacgaaggtggggtggcatggcaagccggactgcggact
ggggacttcctgattgaggtcaacaatgagaatgtggtcaaggtcggccacaggcaggtg
gtgaacatgatccgccaaggagggaaccacctgctcctcaaggtggtcacagtcagccgg
aacctggaccccgacgacacagccaggaagaaagcacccccacctccaaagcgagccccg
accacggccctcaccctgcgttccaagtccatgacctcggagctggaggagcttgtggac
aaagcctcagttcggaagaagaaggataaacccgacgaggtcctgccggtggccaagccc
tcccggaccgccgagaacgtggctgtggagtcaagggtggcaaccatcaaacagcggccc
accagccggtgcttcccagcgacctcggacatgaactccgtgtacgagcgccaaggcatt
gctgtgatgacacccactgttcccgggagcccaaaaggcccgtttctgggtctccctcga
ggtacgatgcgaaggcagaagtccatagacagcagaatctttctatcaggaataactgag
gaagagaggcagttcctggcccctccgatgctgaagttcaccagaagcttgtccatgccg
gacacctcggaggacatcccgccccctccccaggcggtgcccccgtctccaccaccgccc
tccccgaccacctacaactgccccaagtccccgactcccagggtctatgggacaatcaag
cccgcgttcagtcagaatcccgccgccaaggtgtccccggccaccaggtcggacacggtg
gccgccgtgatgcgcgacaagggtgtgttctaccgcagagagctcgaccgctactccctg
gactcggaggacctgtacagtcgcaccgccgccccccaggccaccttccgcagcaagcgg
ggccagatgcccgagaacccctactcggaggtgggcaggatcgcgagcaaggccgtgtac
gtgcccgccaagccggctcgacggaagggcatgctggtgaagcagtccaacgtggaggac
agcccggagaagacctgctccatccccatccccaccatcattgtcaaggagccctccacc
agcagcagcggcaagagcagccagggcagcagcgtggagattgacccgcaggccgcagag
cctccgggcccgctgcggcccgacgacaccctcacggtcagcagccccttcgccgccgcc
atcgccggggcggtccgggaccgggagaagcggctggaggccaagaggaactcccccgcc
ttcctgtccacggacctgggggacgaggacgtgggcctggggccccccgcccccaggata
cggccccccgagttccccgaggagggtgactttggcgacgaggagggcgctgagcagctg
acgccccccacgccaggagctgtgtccagggagcccgaggatcacctcacaggtggaggc
gaggccggcacccagggcgaggcagggaggcccctcaaccccccacccaaagccaagggg
cccgagggcagccccacggccgagagctacgtgcacccgctcactggccggcttctggac
cccagctccccgctggccctggccctctcggccagggaccgagccatgaaggagtcgcaa
cagggtcccaagggggaggcccccaaagccgacctcaacaaacctctctacatcgatacc
aaaatgcggcccagcgtggacgccggcttccctccggtcaccaggcagaacacccgtggg
cccctgcggcgccaggagacggagaacaagtacgagagtgacgtgggcaaggagcggccc
atgctcatcgacatcgtggacacgtcgcagcgcaagcctgccggcctgctcatggtgcac
acggtggacgcggccaaggcagatggcgccctggaggaggaggacgagagcgcggacctg
gagccggacgactcgccgcccgaggtgccagaaggcatttccgaaaccgaaggtgcttta
cagatcgccgcagcccccgagccccccgccacgcccggcaggaccatcgtggcggcgggc
tccgtggaagaggcggtgattttaccgttccgcatccctcctccccctctggcgtccctg
gatctggacgaggagtttatttttacagagccattgccccctcccctggaatttgcaaat
agttttgatatccccgacgaccgcgtcgcttccgtccccgcgctcacggacttggtcaag
cagaagagaaacgacggggctccgaccccttcgctcagctcggccgatggcaagaagccc
gccagcctttccaactgcctgcccgcctcgctcctgccgcccccggagagcttcgacgcc
gtggccgactctggcatcgaggaggtggacagcaggagcagcagcgaccaccacctggag
acgaccagcaccatctccaccgtgtccagcatctccacgctgtcgtcggaaggcggcgag
aacgcagacacctgcacggtctatgcagacgggcaagcgtttgtggttgacaagcccccg
gtacctccgaagccaaaagtgaagcccatcattcacaagagtaatgccctgtaccaggac
gcgctcctggaggaggatgcggacggctgcggggtccccccacccgcacccccgccgccc
cccggagggatcccgccggccattgccaaggtcctccagccgcgaacctccaagctgtgg
ggcgacgtcacagaggtcaagggccccatcctctccggccccaaggccaacgttattagt
gaattgaactcaatcctgcagcaaatgaaccgagagaaagcggtgaagccgggggaaggc
ctggactcactggccggagccaagtccgccagcctcgctgccagaagcccagaggtcatg
agcactgtctcaggtacacggagcacgacggtcaccttcactgtccgccccggcacctcc
cagcccatcaccctgcagagccggccccccgactacgaaagtaggacctcagggccgaga
cgtgccccaagccctgtggtctcgccgacagagctgagcaaagagctcctgcccgcccca
ctctctgccgccgcgtcgccctcccctgccctgtctgacgtcttcagccttccaagccag
cctccttcaggggacctgtttggcttgaaccctgcgggacgcagcaggtcgccgtccccc
tcaatactgcaacagccaatctcaaataagcctttcacaactaagcctgtgcatctgtgg
actaaacccgacgtggccgactggctggagagcctgaacctgggcgagcacaaggagacc
ttcctggacaacgagatcgatggcagccacctgcccaacctgcagaaggaggacctcatt
gacctgggcgtgacacgcgtcggccacaggatgaacatagaaagggctttgagacagctg
ctagacagataa
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