Ochotona princeps (American pika): 101531922 Help Entry 101531922         CDS       T07609                                  Symbol COL6A1 Name (RefSeq) collagen alpha-1(VI) chain   KO K06238   collagen type VI alpha Organism opi  Ochotona princeps (American pika) Pathway opi04151   PI3K-Akt signaling pathway opi04510   Focal adhesion opi04512   ECM-receptor interaction opi04518   Integrin signaling opi04820   Cytoskeleton in muscle cells opi04974   Protein digestion and absorption opi05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:opi00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101531922 (COL6A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101531922 (COL6A1)    04518 Integrin signaling     101531922 (COL6A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101531922 (COL6A1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101531922 (COL6A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     101531922 (COL6A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     101531922 (COL6A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:opi04147]     101531922 (COL6A1)    00536 Glycosaminoglycan binding proteins [BR:opi00536]     101531922 (COL6A1) Exosome [BR:opi04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    101531922 (COL6A1) Glycosaminoglycan binding proteins [BR:opi00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101531922 (COL6A1)  Hyaluronan   Extracellular matrix or blood plasma proteins    101531922 (COL6A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  VWA Collagen VWA_2 VWA_3 YcaO FabMG Motif Other DBs NCBI-GeneID:  101531922 NCBI-ProteinID:  XP_012784931 LinkDB All DBs Position 14:122368502..122388042 Genome browser AA seq 782 aa AA seqDB search MRLAHALLALLLQAGWGAAQDLPEVPKAIAFQDCPVDLFFVLDTSESVALRLKPYGALVD KVKAFTKRFIDNLRDRYYRCDRNLVWNAGALHYSDEVEVISGLTRMPAGRDALKASVDAV KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK HLGIKAFSVAITPDHLEPRLSIIASDHTYRRNFTAADWGQSRDAEEAISQTITTIADMIK NNVEQVCCSFECQPARGPPGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGM KGEKGSRGEKGSRGPKGYKGEKGRRGIDGVDGMKGEPGADGEPGRPGNTGPPGDEGDPGE PGPPGEKGEAGDEGNAGPDGPPGDRGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGP VGIPGDPGEAGPVGPKGYRGDEGPPGLEGPRGAPGPAGPPGDPGLMGERGEDGPPGNGTE GFPGFPGYPGNRGPPGINGTKGYPGLKGDEGEPGDPGEDNNDISPRGAKGAKGYRGPEGP QGPPGHTGPPGPDPNTTRAESLRDTDKKCPDYTCPITFSSPADITILLDGSASVGSRNFD TTKLFAKRLAERFLSAGREDPAHDVRVAVVQYSGPGQQRPERAALQFQRNYTVLAEAVDS MAFFNDATDVNDALSYVTRFYREASSPTATKKVLLFSDGNSQGATAEAIERAVQEAQRAG LEIFVVVVGRQANEPHVRVLVTGKTAEYDVAFGERHLFRVPSYQALLRGVFYQTVSRKVA LG NT seq 2349 nt NT seq  +upstreamnt  +downstreamnt atgaggctggcccacgccctgctggccctgctgctgcaggctggctggggggctgcacaa gacctcccggaggttccgaaggccatcgccttccaagactgtcctgtggacctgttcttc gtgctggacacctctgagagcgtggccttgaggttgaagccctatggggccctggtggac aaggtcaaggccttcacgaagcgcttcatcgacaacctaagagacaggtactaccggtgt gatcgcaacctggtgtggaacgcaggcgcactgcactacagcgacgaggtggaggttatc agcgggctcacgcgcatgcctgcaggccgcgacgcactcaaggccagcgtagatgctgtc aagtacttcggcaaaggcacctacactgactgtgccatcaagaaggggctggaggagctg ctggtcgggggctcccacctgaaggagaacaagtatttgattgtggtgacagacgggcac cccctggagggctacaaggagccgtgcgggggcctggaggacgccgtgaatgaggccaag cacctgggcatcaaggccttctccgtggccatcacgcccgaccacctggaaccgcgtctg agcatcatcgcatccgaccacacctaccgacgcaacttcacagcggctgactgggggcag agccgcgacgcagaggaggccatcagccagaccattaccaccattgctgacatgatcaaa aataatgtggagcaggtgtgctgctcctttgagtgccagccggccagaggacccccagga cccagaggagaccccgggtacgagggagaacgcgggaagccagggctcccaggagagaag ggagaagctggagaccccggaagaccaggggacctcgggcctgtgggctaccagggcatg aagggagagaagggcagccgaggggagaagggctccaggggacccaaaggctacaagggc gagaagggcagaagaggcattgacggtgtggacggcatgaagggtgagcctggagccgac ggggagcctgggagacctggaaacacagggccgcccggagatgagggtgatccgggagag cctggtccccccggagagaagggagaggctggcgacgagggcaacgcaggacctgatggg cctcctggagacaggggtggccccggagagcgaggaccccggggaaccccaggtgtgcgg ggcccgagaggagacccgggtgaagctggaccacaaggtgaccaagggcgagagggcccc gtcggcatcccaggagacccgggtgaggccggccccgtgggacctaaaggctatcgaggc gacgagggccccccagggctggagggtccccgaggtgccccaggacctgctggaccccct ggagacccagggctgatgggcgagcggggcgaggacggcccccccggaaatggcaccgag ggcttccctggtttccctggctacccaggcaacaggggcccccctgggataaacggcact aaaggctacccgggcctcaagggagacgagggtgaacctggagacccaggagaggacaac aatgacatctcaccccgtggtgccaaaggggcgaagggttaccgtggccctgagggcccc cagggacccccaggacatacaggaccccctggaccagatcccaacacaaccagggctgaa tccctgcgagatacggataagaaatgcccggattacacctgcccaatcacattctcgtcc ccggctgacatcaccatactgctggacggctcagccagcgtgggcagccgcaacttcgac accaccaagctcttcgccaagcgcctggctgagcgcttcctgtcagcgggccgggaggac ccggcacacgacgtgcgcgtggccgtggtgcagtacagcggccctggccagcagcggccg gagcgcgcggccctgcagttccagcgcaactacacggtgctggccgaggcagtggacagc atggccttctttaacgacgccactgacgtcaatgacgccctcagctatgtgacgcgtttc taccgcgaggcctcgtcgcccacggccaccaagaaggtgctgctcttctccgatggcaac tcacagggcgccacagcggaggccattgagagggccgtgcaggaggcccagcgtgccggc ctggagatcttcgtggtggtggtgggccgccaggccaacgagccccacgtccgcgtgctg gttaccggcaagacagcggagtacgacgtggccttcggtgagcgccacctcttccgcgtc cccagctaccaggcactgctgcgtggcgtcttctaccagaccgtgtccaggaaggtggct ctgggctag

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