Ochotona princeps (American pika): 101532005
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Entry
101532005 CDS
T07609
Symbol
ATG4B
Name
(RefSeq) cysteine protease ATG4B isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04136
Autophagy - other
opi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101532005 (ATG4B)
04136 Autophagy - other
101532005 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101532005 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101532005 (ATG4B)
03029 Mitochondrial biogenesis [BR:
opi03029
]
101532005 (ATG4B)
Peptidases and inhibitors [BR:
opi01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
101532005 (ATG4B)
Membrane trafficking [BR:
opi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101532005 (ATG4B)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101532005 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
101532005
NCBI-ProteinID:
XP_004597486
LinkDB
All DBs
Position
7:complement(117700321..117718420)
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AA seq
392 aa
AA seq
DB search
MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSLFTEKNEILSDVASRLWFTYRKNFPA
IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLHAFIDRKD
SYYSIHQIAQMGVGEGKSVGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
RLCRTGLPCAGAGARPAGTDWQCNGFPVGAEVTNRPPWRPLVLLIPLRLGLTDINEAYVE
TLKHCFRMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVELTDSCIIPDESFHC
QHPPCRMNIGELDPSIAVGFFCKTEDDFNDWCQQVRKLSLLGGALPMFELVEQQPAHLAC
PDVLNLSLESSDAERLERFFDSEDEDFEILSL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggccactctgacctacgataccctccggtttgctgagtttgaggatttccct
gagacctcggagcccgtgtggatactggggagaaagtacagccttttcacagagaagaac
gagatcctgtctgatgtggcttcaagactttggtttacctataggaaaaacttcccagcc
attggaggcacgggccccacttcagacacaggctggggctgcatgctgcgctgtggccag
atgatcttcgctcaagccctggtgtgtcggcacttgggtcgagattggcggtggacacag
cgaaagaggcagcctgacagctacttcagtgtcctgcatgccttcattgacagaaaagac
agctactactctatccaccagatagcgcaaatgggtgtcggcgaaggcaagtcggttggc
cagtggtacgggcctaacaccgtggcccaggtcctcaagaagctggccgtctttgacaca
tggagctccctggcagtccacatagctatggacaacaccgtggtgatggaggagatcagg
aggttgtgcaggaccggtcttccctgtgcaggggcaggtgcccgacctgctggcactgac
tggcagtgcaatggatttcctgtgggtgctgaggtcaccaataggccaccgtggagaccc
ctggtacttctcatcccactacgcctggggctcacggacatcaacgaggcctatgtggaa
actctgaagcattgtttcaggatgccccagtctctaggagtgattggagggaagcccaac
agcgcccactacttcattggctatgtgggagaggagcttatctacctggacccccacacg
acacagccagccgtggagctgacagacagttgcatcatccctgatgagagcttccactgc
cagcaccctccatgcaggatgaacatcggggagcttgacccgtccattgctgtggggttc
ttctgtaagactgaagatgacttcaacgactggtgccagcaagtcaggaagctgtccttg
ctgggaggcgccctgccaatgtttgagttagtggagcagcagccggctcaccttgcctgc
cctgatgtcttgaacctgtccctagaatcttctgatgcagagcgactagaaagattcttt
gattcagaagatgaagactttgagatcttgtcactttga
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integrated database retrieval system
