Ochotona princeps (American pika): 101532067
Help
Entry
101532067 CDS
T07609
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03013
Nucleocytoplasmic transport
opi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101532067 (CASC3)
03015 mRNA surveillance pathway
101532067 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101532067 (CASC3)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101532067 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101532067
NCBI-ProteinID:
XP_004591226
LinkDB
All DBs
Position
19:complement(9599385..9613180)
Genome browser
AA seq
699 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSGSGSGGGSGSLPSQRGGRAGALHLR
RVESGGAQSAEESECESEDGIEGDAVLSDYESAEDSEGEEEYSEEENSKVELKSEANDAV
NSTKEEKGEDKHDTKGTVTGERQSGDGQESTEPVENKMGKKGPKHLDDDEDRKNPAYIPR
KGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGYDI
RSAHNPDDIKPRRIRKPRYGSPPQRDPNWIGERSNKSHRHQGPGGTLPPRTFTNRSAAGT
GRMSAPRNYSRSGGFKEGRAGFRPMEAEGQHGGRSGETTKHETGYRSQRLEQTPVRDPSP
EADTPELGGPEKEEAAPETPATAPEPVPPAPDRPVEKKSYSRARRTRTKVGDAGKVAEEV
PPPPEGLPPAPAVPETTPPPPAKTGSWEAPVDSTSGLEQDVAQLNIAEQSWNPGQPSFVQ
PRELRGMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISIMEG
HYYDPLQFQGPIYTHGDSAAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLYPPPVS
MSPGQPPPQQLLAPTYFSAPGVMNFGNPNYPYAPGALPPPPPPPHLYPNTQAPSQVYGGV
TYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcggcagcgcgcctcgcaggacacggaggatgaggagtcgggggct
tcgggctcggacagcggcggttccccggcgcgcggcggcggcagcggcagcggcagcggc
ggcggtagcggctccctgccttcccagcgcggcggccgagccggggccctgcatctgcgg
cgggtggagagcgggggcgcccagagcgccgaggagtcggagtgtgagagtgaagatggc
atcgagggcgatgctgttctctcagattatgaaagtgcagaagactcagaaggtgaagag
gaatacagtgaagaggaaaactccaaagtggagttgaagtcagaagctaatgatgctgtt
aattcaacaaaagaagagaagggggaagacaagcatgacaccaaaggaactgtgactgga
gagagacaaagtggggatggacaggagagcacagagcctgtggagaataaaatgggtaaa
aagggtcccaagcatttggatgatgatgaagacaggaagaatccagcgtacataccccgg
aaagggctcttctttgagcatgatcttcgaggccaaactcaggaggaagaagtcagaccc
aaggggcgtcagcggaagctgtggaaggatgagggccgctgggagcatgataagtttcgg
gaagatgagcaggccccaaagtcccgccaggagctcattgctctttatggctatgatatc
cgctcagctcataaccctgatgacattaaacctcgaagaatccggaaacccagatatgga
agccctccgcaaagagatccaaactggattggtgagcgttcaaataagtcccaccgccac
caaggtcctgggggcaccctaccgccaaggacatttactaacaggagcgctgcaggtacc
ggccgcatgtctgcacccaggaattactctcgatctgggggcttcaaagaaggtcgtgct
ggctttcggcctatggaggctgaggggcagcatggaggccggtctggcgagactactaag
catgaaactggttaccggtcccagcgcctggagcagactccggtgagggatccgtctcct
gaagcagatacgccggagcttggaggtcctgagaaggaggaggcagcccccgagacacca
gccacggctcctgagcctgtaccaccagcccctgacagacctgtcgagaagaaatcctac
tcccgggcgagaagaacccgcaccaaagtaggagatgctggcaaagttgcagaggaggtc
ccccctccacctgaagggctgcccccagctcctgcagttccagagaccacccctcctcca
cctgctaagactggaagctgggaggctccggtggattctaccagcggactggaacaagat
gtagcacaattaaatatagcagagcagagttggaatccaggccagccttcattcgtgcag
ccccgggagcttcgaggtatgcccaaccacatacacatgggagcaggacctccacctcag
tttaaccggatggaagaaatgggtgttcagggtggtcgagccaaacggtattcatctcag
agacagagacctgttccggagccccctgcccctcctgtgcacatcagcatcatggaggga
cattactatgacccactgcagttccagggaccaatctatacccatggtgacagcgctgcc
ccactgcctccacaaggcatgattgtgcagccagaaatgcaccttccccacccaggttta
catccccaccagacaccggcgcctctgcccaatccgggcctctatcccccaccagtgtct
atgtctccaggacagccaccgcctcaacagctgcttgctcccacttacttttctgcccca
ggggtcatgaactttggtaatcccaattacccttatgctccaggggcactgccccctcca
ccaccacctcctcatctgtatcctaatacgcaggccccatcacaggtatatgggggagtg
acctactataacccagcccagcaacaggtgcagccaaagccctccccaccacggagaacc
ccccagcccgtcaccatcaagccccctccacctgaggttgtaagcaggggctccagttaa
DBGET
integrated database retrieval system