Ochotona princeps (American pika): 101532104
Help
Entry
101532104 CDS
T07609
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
101532104 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101532104 (MYO5C)
04131 Membrane trafficking [BR:
opi04131
]
101532104 (MYO5C)
03029 Mitochondrial biogenesis [BR:
opi03029
]
101532104 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101532104 (MYO5C)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101532104 (MYO5C)
mRNA cycle factors
P-body specific factors
101532104 (MYO5C)
Membrane trafficking [BR:
opi04131
]
Others
Actin-binding proteins
Myosins
101532104 (MYO5C)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101532104 (MYO5C)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101532104 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
101532104
NCBI-ProteinID:
XP_004578426
LinkDB
All DBs
Position
17:complement(64824917..64935839)
Genome browser
AA seq
1512 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGDRVLHLLLEDGTELDLPVDPKALPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYTGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSRSSSNAHIEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDKRNQIIGANMRTY
LLEKSRVVFQAENERNYHIFYQLCACAQQSEFKHLRLASAEEFNYTRMGGNTVIEGVNDR
ADMLETQRTFTLLGFKEDFQMDIFKILAAILHLGNVQIVAVGNERSSVSEEDIHLQVFCE
LLGLDSSHIAQWLCNRKIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFEFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDTLVEILRASKFHLCAKFFQEDPTPPSPF
GAMITVKSAKQVIKGNSKHFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTKQELGFSDKKEVCKVV
LNRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVMIQKHIRGWLQRKKFLRER
QAALTIQQYFRGQQTVRKAITATALKEAWAAIIIQKYCRGYLVRNLYQLIRVATITIQAY
TRGFLARRRYRKVLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRAVDVEKIQKLETELERAVSHQQNSEKKRKRYRDAVEEKLAK
LQKHNSELEMQKEQIQLKLQEKTEELKEKMDGLTKQLFDDVQKEERQRILLEKSFEQKTQ
GYEKQIQFLKEEIKALKDEKMQLQNQVEEERLTSDGLKGEVSRLHKQAKTISEFEKEIEL
LQTQKIDVEKHVQSQKREMREKMSEITRQLLESYDIEDVRSRLSLEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDITESIRHE
VTRLTSENMMIPDFKQQISELEQQKQDLEIRLSEQTEKMKGRLEELSNQLNRSRDEEGTP
RRILEAQSEIHSKEKEKLLGNIQEMQDTGEPLKKDLENESEGSGNIQQEAAHLTLETRDL
EEELDMKDRIIKKLQDQIKTLTKTIEKANDVSLSSGPKEYLGMLEYKREDETKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDADMLKSLMNSTINGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIEI
PSSLKLGFLNRL
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacgcagtacaacagggtctggattcccgatcctgaagaa
gtttggaaatctgcggaaatagccaaggactatagagttggtgaccgagtgctgcacctg
ctgctggaggatggaacggagctggatcttcccgtggatccaaaagcattgcctccgctt
cgcaatcctgacatcctggtgggcgagaacgacctcacggccctcagctatctgcacgag
cccgctgtgctccacaaccttagaatccgcttcgcagaatccaaactcatttatacctac
agtgggatcatcttggtggctatgaacccttacaagcagctgcccatctatggagatgcc
atcatccatgcctacactgggcagaacatgggcgacatggacccacacatatttgctgtg
gctgaagaggcatacaagcagatggccagaaacaacaaaaatcagtcgatcatcgtgagc
ggggagtcgggtgctgggaagaccgtgtcggctcgctatgctatgcggtactttgccaca
gtcagcaggtcgagcagcaatgcacacatcgaggacaaggtcctggcgtccaatcccatc
actgaggctgtcgggaatgccaagaccacccgcaatgacaacagcagtcgctttgggaaa
tacacggaaatcagtttcgacaagaggaatcagatcataggagccaatatgcgaacttac
ctgctggaaaaatccagagttgtcttccaggcagaaaatgaacggaattaccatattttc
tatcagctgtgtgcatgtgcacagcagtcggaatttaaacatctcagactggcgagtgcg
gaggagtttaattacacgagaatgggaggcaacactgtgatcgagggtgtgaatgacaga
gctgacatgctggagacacagaggaccttcacgctgctgggtttcaaggaggacttccag
atggacatctttaagatcctggcagccatcctacatctgggcaatgtgcagattgttgca
gtgggcaatgagaggtcttcagtcagtgaggaagacatccacctgcaggtgttctgtgag
ctcctgggcctggacagcagccacattgctcagtggttatgcaaccgcaagatcgtcaca
agctccgagacggtggtgaaacccatgaccaggccccaggctgtcaatgccagagatgcc
ctggccaaaaagatctatgcacacctgttcgaattcattgtggagagaattaaccaagcg
ttgcagttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgacatcaacagttttgaacagttttgcatcaattatgctaatgagaaactgcag
caacagttcaacctgcatgtctttaagcttgaacaagaagagtacatgaaggaagatatc
ccctggactctgatagatttctatgacaatcaaccagttattgacttgattgaagccaaa
atgggcattttggagttactggatgaagaatgcttgttaccacatgggaccgatgaaaac
tggcttcagaagctgtataataattttgtcaacaagaactctctgtttgaaaagcccaga
atgtcaaacacatcctttatcatccaacacttcgctgataaggtagagtataaatgtgaa
ggctttcttgagaagaacagagacaccgtctatgacacgctggttgaaatcctgagagcc
agcaagtttcatctctgtgccaagttttttcaagaagatccaactcccccctcccctttt
ggtgcaatgatcacagttaagtccgcaaagcaagtcatcaagggcaacagcaagcatttc
cggaccacagtcggaaacaagttccgcagctctctctacttgctgatggagaccctcaat
gccacgactccccactatgtccgctgcatcaagccaaatgatgagaagctgccctttgag
tttgattccaaaagaatcgtgcagcagctgcgagcctgtggcgtcttagaaacgattcgc
atcagtgctcagagctacccttccaggtggacgtacatcgagttctatagccgctacggc
atcctcatgaccaagcaggagcttggcttcagtgacaagaaagaggtgtgcaaggtggtc
ctaaacaggctcatccaggattccaatcagtaccagtttggtaagaccaaaattttcttc
agagcaggacaagtggcttatttagagaaactgcggctagataaactgaggcagagctgt
gtgatgatccagaaacacatccgcggctggctccagagaaagaagttcctgcgagaacgc
caggcagccctgacaatccagcagtacttccggggccagcaaactgtgaggaaagcaatt
actgccacagccttaaaagaagcatgggcagccatcatcattcagaagtactgccgaggg
tatctggttcgcaacctgtaccagctcatccgcgtggccaccatcaccatccaggcctac
accagggggttcctggcgaggaggagataccgcaaggtgctggaggaacacaaggctgtg
atcctgcagaagtatgcccgggcatggcttgccaggcgcaggttccagaacatccgccga
tttgtgctcaacattcagctcacgtacagggtccagcgtttgcagaaaaagctggaagat
cagaacaaagagaaccatggtctggtggagaagctgaccagcctggccgctcttcgggcc
gttgatgtggaaaagatccagaagctggaaacagaactggagagagcagtcagccaccag
cagaactctgagaagaagaggaagagatacagggatgctgtggaagagaaattggccaag
cttcagaagcataactcagagctggagatgcagaaagagcagatacagctgaagcttcag
gagaagacggaagagttgaaggagaaaatggacggcctcaccaagcagctgtttgatgat
gtgcaaaaagaggaacggcagagaatacttcttgaaaaaagctttgagcagaaaacgcaa
ggctatgagaagcagattcagtttttgaaagaagaaatcaaagctctcaaggacgagaaa
atgcaattgcagaatcaggtggaggaagagcgcctcaccagtgacggcttgaagggggag
gtgtcgcgactgcacaagcaggccaagacaatctctgagtttgaaaaggagatagaacta
cttcagacgcagaagatcgatgtggaaaaacacgtgcagtcacagaaacgggaaatgcga
gaaaagatgtcagaaatcaccagacagcttctggaaagctatgacattgaagatgttaga
agcaggctctccttggaagacttggagcatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagccacacgtgttttggagagccatttccaatcccagaaagat
tgctatgaaaaggaaatagaagctttgaacttcaaagtggtgcatctaagtcaagagatc
aaccacctgcagaagttatttagagaagagaacgacatcactgaaagcatccgtcacgaa
gtgaccaggctgacatcagagaacatgatgatcccagactttaagcagcagatttcggag
ctggagcaacagaagcaagaccttgaaatccgcctgagcgagcaaactgagaaaatgaaa
ggaagactggaagagttgtccaaccagttgaatcgcagtcgagacgaggaaggaacacca
agaaggatcttagaagcccaaagtgaaatacactccaaagagaaagagaagctgctgggt
aacattcaagaaatgcaggatactggtgagcccttgaaaaaagacttggaaaacgaaagt
gaaggctctggcaacatccagcaggaagcagctcatctcactttggaaaccagggatctg
gaagaagagttagacatgaaggacagaataattaaaaagctacaagatcaaatcaagact
ctaaccaagacaattgaaaaagccaatgatgtgagcttgtcctcggggcctaaggagtac
ctgggcatgctggaatacaagagagaagatgagaccaaactcattcaaaacctcattctt
gacttgaagcctcgtggtgtggtggtgaacatgatccccggactgccagctcacatcctg
ttcatgtgcgtgcgctacgcagactcgctcaatgatgccgacatgctcaagtcccttatg
aacagcaccattaatggcatcaagcaggtggttaaggaacatctggaagattttgagatg
ctgtccttttggctctccaatacttgtcatttcctcaactgcctgaagcagtacagtgga
gaagaggcactcctcaacagccgggaggattcctcacagctgatgctggacaccaaatac
ctcttccaagtcacctttccttttaccccatctccacacgctctggaaatgatcgagatc
cccagcagtttaaagctgggctttctcaatagattgtaa
DBGET
integrated database retrieval system
