Ochotona princeps (American pika): 101532127
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Entry
101532127 CDS
T07609
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101532127 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101532127 (NIPBL)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
101532127 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
101532127
NCBI-ProteinID:
XP_004583710
LinkDB
All DBs
Position
11:complement(20132930..20297625)
Genome browser
AA seq
2802 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNARIAEEVNCLLACRDDN
LISQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSLQNRYVPSG
MMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAPQ
SPAGYMPYSHPSSYTAHPQMQQASVSNPIVAGGLRNIHDNKVSGPLSGSSANHHADNPRH
GSSDDYLHMVHRLSNEDGDSSTIRNATSFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQS
LPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQNEKAAMYDIISSPSKDSTKLTLR
LSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCLS
QQEQTAFLPANQVPVLQQNTSVATKPPQTSVVQNQQQVSQQGPIYDEVELDALAEIERIE
RESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALMV
SIDLHQAGRVDSQASISQDSDSIKKPEEIKPCNDAPISVLQEDIIGSLKSTPENYPETPK
KKSDSELSKSEMKQNESRLSESKPNENQLVETKSNENKTETKTETQTEELKQSESRTTES
KQNENPIGEPKQNENRPSDTKPNDNKQNNSRLETTKSRPETPKQKGESRPETPKQKSDVR
PETPKQKGDGRPETPKQKGESRPETPKQKNEGRPETPKHRHENRRDSGKPSTEKKPDVSK
HKQDIKSESPRLKSERAEALKQRPDGRSISESLRRDHDNKQKLDDRGESERHRGDQSRIR
RPETLRSSSRNEHGIKSDVSKTDKLERKHRHESGDSRERLSSGEQKSRPDSPRVKQGDSN
KSRPDKPSFKSPNSKDDKRTEGNKSKVDGNKAHPDNKAEFPSYLLGGRSGALKNFVIPKI
KRDKDGNITQETKKLDMKDQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDRED
KSRSSLKPIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEK
PKYAEISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHEGRRSSG
GGRYRNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRF
TASIENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTEKT
VKVLNILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPN
MPKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQRV
IVMLYNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVF
SRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQCVV
HLPSSEKDSNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLF
ENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRK
DAVTSKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFR
DTTLETEKAMKSQKDEESSEGTHHAKEIETTGQIMHRAENRKKFLRSIIKTTPSQFSTLK
MNSDTVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAV
DPSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGI
SVRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHND
KEAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHI
LKYEESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFM
VICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQN
FKFVWACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFK
GNSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNNILSD
KNSSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLY
LKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQL
VEIDKKYAGFIHMKAVAGMKMSYQVQQAINTCLQDPVRGFRQDESSSALCSHLYSMIRGN
RQHRRAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGS
NLLQSFKESMVKDKRKERKSSPSKENESSESEEEISRPRKSRKRVDSDSDSDSEDDINSV
MKCLPENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINR
KTGVHFHPKQTLDFLRSDMANSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVSAS
TNARNKAITSLLGGGSPKNNTAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMN
ESVDVMDVIAICCPKYKDRPQIARVVQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPW
VDTIKESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8409 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccatcactactcttgcggggattgctagtctcaca
gacctcctgaaccagctgcctcttccatctcctttacctgccaccactacaaagagcctt
ctctttaacgcaagaatagcagaagaggtgaactgccttttggcctgtagggatgacaat
ttgatttcacaacttgtccatagcctcaaccaggtatcaacagatcacatagaattgaaa
gataaccttggcagcgatgatcctgaaggcgacataccagtcttgttgcaggctgtcctg
gcaaggagtcctaacgttttcagggagaaaagcctgcagaacagatatgtaccaagtgga
atgatgtctcaatacaaactttctcagaattccatgcacagtagtcctgcatcttccaat
tatcaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagacaagc
tctgggaacagatttatgccacaacaaaatagcccagtgcctagtccctatgccccacaa
agccctgcaggatacatgccatattcccatccttcaagttacacagcacatccacagatg
cagcaagcatcggtatcaaatcccattgttgcaggtggtttgagaaacatacacgataat
aaagtttctggtccgttgtctggcagttcagctaatcatcatgctgataatcctagacat
ggttcaagtgatgactacctacacatggtgcacaggctaagtaatgaagatggagattct
tcaacaataaggaatgcgacatcttttcccttgagatcaccacagccagtttgctcccct
gctggaagtgatggaactcctaaaggatcaagaccacctttaattctacagtctcagtct
ctaccttgttcatcacctcgagatgttcccccagacatcttgctagattctccagaaaga
aaacaaaagaaacagaagaaaatgaaattaggcaaggatgaaaaagaccagaatgagaaa
gctgcaatgtatgatataattagttccccgtccaaggactccactaaacttacattaaga
ctatctcgtgtaaggtcttcagatatggaccagcaagaagatatgctttctggtatggaa
aatagcaatgtctcagaaaatgatattccatttaatgtgcagtatccaggacagacttca
aaaacacccattactccacaggatgtaaatcgcccgctaaatgctgctcaatgtttgtcg
cagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaacact
tcagttgctacaaaaccaccccagacctctgtggtacagaatcagcaacaggtatcacaa
cagggacctatatatgatgaagtggaattggatgcattggctgaaattgaaagaatagaa
agagaatcagccattgaaagggagcgcttttcaaaagaagttcaagataaagataagcct
ttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggtaat
agaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatggtt
agcattgatcttcatcaggcaggaagagtggactctcaggcttctatatctcaggattca
gactccataaaaaagcctgaagaaatcaaaccatgtaatgatgcacctatttctgttctt
caggaagacattattggcagtcttaagtctacaccagaaaactatcctgagacacctaaa
aaaaagtctgattcagagctttcaaaaagtgaaatgaaacaaaatgaaagtagattgtca
gaatctaaaccaaatgaaaaccaactggtagagacaaaatcaaatgaaaataaaacagaa
actaaaactgaaacccaaacagaagaacttaaacagagtgagagcagaacaactgaatcc
aaacaaaatgagaaccccataggcgagcctaaacagaatgagaaccgaccatctgacaca
aaaccaaatgataacaaacaaaataatagcaggttagaaacaacaaaatcaagacctgaa
actccaaagcagaagggtgaaagccgccctgaaactccgaaacaaaagagtgatgtgcgt
cctgaaaccccgaaacagaagggtgatggaaggcctgaaactccaaagcaaaaaggtgag
agccggcctgaaactccaaagcagaaaaatgagggtcgaccagaaacaccaaaacacagg
catgaaaataggagggattctggaaaaccgtcaacagagaaaaaacctgatgtgtctaaa
cataaacaggatattaaatctgaatcacctcggttaaagtcagagcgagctgaagcctta
aagcagagacctgatgggcgatctatttctgagtcactacgacgtgaccatgataataaa
caaaaattagatgacagaggtgaatcagagcgacatcgaggggatcagtctagaattcga
agaccagaaacattgagatcctctagtagaaacgagcatggcattaaatctgatgtttca
aaaactgataaactagaaagaaaacataggcatgaatcaggggactcacgggaaagactg
tcttcgggagaacaaaaatcaagacctgacagtcctcgtgttaaacaaggagattctaat
aaatcaaggcctgataaacctagttttaagtcaccaaatagtaaagatgacaaaaggaca
gaggggaacaagagtaaagtagacggtaataaagcacatcctgacaataaggcagaattt
ccaagttatttgttggggggcaggtctggtgcattgaaaaattttgttattccgaaaatc
aagagggataaagatggcaatattactcaggaaacaaaaaaattggatatgaaagatcag
aaagacaaagtagaaaaaatgggactagttgaagatctaaataaaggagctaagcctgta
gtagttctgcaaaaactgtctttggatgatgttcagaaacttattaaggatagagaggat
aaatcaagaagttcgcttaaacctatcaagaataagccgtcaaaatcaaacaaaggtagt
atagatcaatcagtgttaaaagaattaccccctgaactcctggcagaaattgaatccaca
atgccactttgtgaacgggtgaaaatgaacaaacgcaagcgtagcacagttaatgaaaag
ccaaaatatgctgaaatcagttcagatgaagataatgatagtgatgaagcctttgaatcc
tctaggaaacgacataaaaaagatgatgataaagcttgggagtatgaagagcgtgacaga
agaagctccggggatcataggagaagtggtcactctcatgaaggaagaaggagctcaggt
ggtggtcgttatcggaaccgaagtccgtcagattctgacatggaagattattctcctcct
cccagccttagtgaggttgctagaaaaatgaagaaaaaagaaaaacagaagaaaaggaaa
gcttatgaaccaaaactaacacctgaagaaatgatggactcttcaacttttaaaagattc
acagcttcgatagagaatatattggacaatttggaagatatggattttactgcatttggt
gatgatgatgaaattccacaggaactgctcttaggaaaacatcagcttaatgaacttggc
agtgaatccgccaaaattaaagcaatgggtataatggataagctttcaactgaaaaaact
gtgaaagtcctaaatatcttggagaagaatattcaggatggctccaagctttccactttg
ttaaaccataataacgatactgaagaagaagaaaggctgtggagagaccttattatggaa
agagttacaaaatcagcagatgcctgtcttacaactatcaacattatgacatcccctaac
atgccaaaagctgtgtacattgaggatgtaattgaaagagttatacaatatactaaattc
catttgcaaaatacactttatccccagtatgatcctgtttacagattagatcctcatgga
ggaggcttactaagttcaaaggccaaacgggcaaagtgttccactcataagcagagagtg
atagtaatgctttataacaaagtttgtgacattgttagcagcttatcagaactgctggag
atacagcttcttacagacacaacaattcttcaggtttcatcaatgggaataacaccattt
ttcgtggaaaacgtcagtgaactacagttatgtgccattaagttagtcactgcagtattt
tcaagatatgaaaaacataggcagttaattttggaagaaatttttacttcacttgcaaga
ttgccaactagcaagaggagtttgaggaacttcaggttaaacagtagtgatatggatgga
gaaccaatgtatattcagatggttacagcactggttttacaacttattcagtgtgtagta
cacttgccatcatcagaaaaggactctaattcagaagaagactccaataaaaaagttgac
caggatgttgtcattactaattcatatgaaacagctatgcgaacagcccaaaacttcctt
tctatcttccttaaaaaatgtggtagtaaacaaggtgaagaagattacagaccactgttt
gaaaattttgttcaagaccttctttcaacagtcaataagcctgaatggccagctgctgaa
ctactccttagtttgttagggagactgttggttcatcagttcagtaataaatctaccgag
atggcgttaagagtggcatctcttgattacctcggaactgtcgctgctcgactaagaaaa
gatgctgttacaagcaaaatggatcaggggtctatagaacgaattttgaagcaggtctca
ggaggcgaagatgaaatccaacagttgcaaaaggcattacttgattacctagatgaaaac
actgagactgacccttcactagtgttttctcgtaaattttatatagcccagtggttccgt
gacacaactctggaaacagagaaagcaatgaaatcacaaaaagatgaagaatcatctgaa
ggaacacatcatgcaaaagaaattgagacaactggtcaaatcatgcaccgagctgaaaac
cggaaaaaatttcttagaagcattattaaaaccacaccttctcagttcagcacattgaag
atgaactctgatactgtggactatgatgatgcttgcttaattgttcgatacttggcctcc
atgaggccgtttgcccagagctttgatatttatttgacacagatcctacgagttcttggt
gaaaatgcaattgccgttcgaacaaaagccatgaagtgtttatctgaggttgttgctgta
gaccccagtatccttgcaaggcttgatatgcagcgaggagttcatggacgtttgatggat
aactctaccagtgtccgagaagctgctgtagaattactcggtcgatttgtcctttgccga
cctcaacttgctgaacagtattatgacatgttaattgaacgaatattggatactggtatc
agtgtcaggaaaagggtaataaagattctaagagatatctgcattgaacaaccaacattt
ccaaaaattacagaaatgtgtgtaaaaatgattcgtagagtcaatgatgaggaaggcatt
aagaaattagtgaatgaaacattccaaaaactctggtttactccaacaccacacaatgac
aaagaggcaatgacaaggaaaattttaaatatcactgatgtggttgctgcatgtagagac
actggatatgactggtttgagcaactacttcaaaatttactgaagtctgaagaggattcc
tcatataaacctgtgaagaaggcttgtactcaacttgttgataatctagttgagcacatt
ctcaaatatgaagaatctctagctgactctgacaataaaggcgtgaattctggaagattg
gtagcttgcataaccactctgttcttattcagcaaaataagaccccaactcatggttaaa
catgctatgactatgcagccataccttaccactaaatgtagtacacaaaatgatttcatg
gttatctgcaatgttgcaaaaatcctagaactagttgtgccactgatggaacatccaagt
gaaactttccttgccactattgaagaagatctgatgaagctaatcatcaaatatggcatg
actgtagtgcagcattgtgtgagctgtcttggggctgttgtaaataaagtgacacaaaat
tttaaatttgtgtgggcctgcttcaatagatactatggtgccatttcaaaattaaaaagt
cagcatcaagaagacccaaataacacatcacttttaacaaataaaccagcacttctgaga
tctcttttcactgttggagctctatgtcggcattttgattttgatttggaggattttaaa
gggaacagtaaggttaacataaaagataaagtacttgagttattaatgtattttacaaaa
cattcagatgaagaagtgcaaacaaaagccatcattggtctaggatttgcctttattcag
catccaagtctaatgtttgagcaagaagtgaagaatctgtataataatattttgtctgat
aaaaactcctccgtaaacttaaaaattcaagtgttaaaaaacctccagacctatctacaa
gaagaggacacacgaatgcagcaggcagatagagactggaaaaaagttgcaaaacaggaa
gacttaaaagaaatgggtgatgtttcctcagggatgagtagttccatcatgcagctttac
ctcaaacaggtgcttgaggccttttttcacacccagtccagtgtacgccattttgccctg
aatgtcattgccttgactctaaaccaaggtcttattcatccagttcagtgtgtcccatat
ttaattgctatgggaacagatccagaacctgctatgcggaacaaggctgatcagcagctt
gtggaaatagacaaaaaatatgctggattcattcatatgaaagcagtggctggcatgaag
atgtcttatcaggtgcaacaagcaatcaacacgtgcctacaagaccctgtgaggggtttc
cgacaagatgagtcctcaagcgctttgtgctcacacctctactccatgatccggggaaac
cgccaacacagacgagcgttccttatttctttactcaacctctttgatgacacagcaaaa
acagaagtgactatgctcttgtatatagcagacaatctagcctgttttccataccagaca
caggaagagccgttgtttataatgcatcatatagacattacactctcagtttctggtagt
aacctactgcagtcattcaaggagtctatggtaaaggacaaaaggaaagagagaaaatca
tcacccagtaaagaaaatgagtcaagtgagagtgaagaagaaatttccaggcctcggaag
tcacgaaagcgtgtagattcggattcagattcagattcagaagatgatataaattcagtg
atgaaatgtttaccagaaaattcagctcctttaattgaatttgcaaatgtctcccagggt
attttattgcttctaatgttaaagcaacatttgaagaatctctgtggattttctgatagt
aaaattcagaaatactctccatctgaatctgcgaaagtatatgataaagcgataaacaga
aaaacaggagttcattttcatcccaaacaaacattggacttcttacgaagtgatatggct
aattccaaaattactgaagatgtgaagaggagtatagtgaaacagtatctagatttcaaa
cttctcatggaacatctagaccctgatgaagaagaggaagaaggggaggtgtcagctagt
acaaatgctcggaacaaagcaattacctcgctgcttggaggaggcagccctaaaaataat
acagcagcagagacagaagatgatgaaagtgatggggaggatagaggaggaggcacttca
gggtcattgagaaggtcaaaacgaaattcagactctacggagttggcagcacagatgaat
gaaagtgttgacgtcatggatgtcatcgctatttgctgtccaaagtacaaagatcgacca
caaattgcaagagtagtacagaaaaccagcaatggcttcagtgttcagtggatggcaggc
tcctacagtggctcctggactgaggctaagcgccgtgatggccgcaaactggtgccttgg
gtagacactataaaagagtcagacattatttacaaaaaaattgctctaacgagtgctaat
aagctgactaataaagttgttcagactttacgatccctgtatgccgccaaggatgggact
tccagctaa
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integrated database retrieval system