Ochotona princeps (American pika): 101532349
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Entry
101532349 CDS
T07609
Symbol
CALD1
Name
(RefSeq) caldesmon
KO
K12327
caldesmon
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
101532349 (CALD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
opi04812
]
101532349 (CALD1)
Cytoskeleton proteins [BR:
opi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
101532349 (CALD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
101532349
NCBI-ProteinID:
XP_012786562
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Position
7A:13872115..14067681
Genome browser
AA seq
769 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLG
QVEVNAQNSVSNEEAKSITTNTQVEGDEEAALLERLARREERRQKRLQEALEKQKDTDPT
DASSSLSSRRMQNDTAENEAAEKEEQSQERHETQETEIVTKSYQKNEWRDAEDRKKEEEE
REDEEKSKQGSIGENQVEAVAGEKTSETHEDMVVTPGRNGEVGAEEAKAEEERGQAPDAV
AHDGKAEQEERERAEAERVRLEEEERLKAEQERKKAEERARIEAEEKAAAQEKERKEAEE
RERREAEERERREAEERERREAEERQRREAEERERREAEERQRREAEEKKAAEEQQRALA
EQEKAKLEEQKLKKQLEERKDETQEKKLKGGEGEEKAGGKLVHEKAQEDKPQTAALRKQE
EEKKEKVQAQKEKSQDGQPTFKRDEVKDEKVKKDKEPKEVKSLMDKKKGFTEEKSQNGEF
VTHKLKHAENTFSRSGGKASGDAQEAEAGKRLEELRRRRGETENEEFEKLKQKQQEAAQE
LEELKKKREERRKVLEEEEQRKKQEEADRKVREEEEKRRLKEEIERRRAEAAEKRQKMPE
DGLADDKKPFKCFTPKGSSLKIEERAEFLNKSVQKSSGVKSTHQAAVVSKIDSRLEQYTS
AIEGTKTAKSTKPAASDLPVPAEGVRNIKSMWEKGNVFSAPAASGTPNKETAGLKVGVSS
RINEWLTKTPDGNKSPAPKPSDLRPGDVSGKRNLWEKQSVDKVTSPTKV
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatgattttgaacgtcgcagagaacttaggaggcaaaagagagaggagatgcggctg
gaagcagagagaatcgcctaccagaggaatgacgatgatgaagaggaggcagcccgggaa
cggcgccgcagagcccgccaggaaaggctgcggcagaagcaagaggaagaatctttggga
caggtggaagtgaacgcccagaacagcgtgtccaacgaggaggccaagtcgatcaccaca
aacactcaggtggaaggtgatgaggaggctgcgttactagagcgcctggctcggcgagag
gaaagacgtcagaagcggctccaggaagccctggagaaacaaaaggatactgacccaaca
gatgccagttcttccctctcaagcagaaggatgcaaaatgatacagcagaaaatgaagct
gccgagaaggaagaacaaagccaagaaagacacgagacacaggagacagagatagtcacc
aaatcctatcagaagaatgagtggagggatgccgaagacagaaagaaagaagaggaagaa
agggaagacgaggagaagtccaagcaaggaagcattggagaaaatcaggtagaggcggtg
gcaggagagaaaacatcagaaacccacgaggacatggtggtaacaccagggagaaatggg
gaagtcggtgcagaagaggctaaagcagaggaggagaggggacaagctccagatgcagtt
gctcatgatggaaaggcggaacaggaggagagagaaagagctgaggcagagagggtgagg
ttggaggaagaggagagacttaaagctgagcaggaaaggaagaaagccgaagaacgggca
agaatcgaagccgaggaaaaagcagctgcacaggaaaaggaaaggaaggaggcggaagag
agggagaggagggaggcagaagagagggagaggagggaggcggaagagagggagaggagg
gaggcggaagagaggcagaggagggaggcggaagagagagagaggagggaggcagaagag
aggcagaggagggaggcagaagagaagaaagcagcagaggaacagcaaagagctttggca
gagcaggagaaagctaagctagaagagcaaaagcttaaaaagcagctggaagagagaaaa
gatgaaacgcaagagaagaagttaaaggggggggaaggggaagagaaagcaggagggaaa
ttggttcatgaaaaagcacaagaagacaaacctcagacagctgccctaaggaagcaggaa
gaagaaaagaaagagaaagtacaagctcaaaaagaaaagtcccaagatggccagcctacc
ttcaagagggacgaggtcaaagatgaaaaggtgaagaaggacaaagagccgaaagaagta
aagagcctcatggataaaaagaagggcttcacagaggagaagtcacagaatggagaattc
gtgactcacaaacttaaacatgctgagaacacattcagccgctctggaggcaaggccagt
ggggacgcccaggaggccgaagccggcaagcgcctagaggagctgcgccgtcgacgcggg
gagacagagaacgaagagtttgagaagctcaaacagaagcagcaggaggcagcccaggag
ctggaggagctgaagaagaagagagaggagcggaggaaagtcctggaggaggaagagcag
cggaagaagcaggaagaggcagatcgaaaagtcagggaggaggaagagaaacggaggcta
aaggaagagatagaaaggcgaagggcggaagctgctgagaaacgccagaagatgccagaa
gatggcttggccgatgataagaagccattcaagtgcttcacccctaaagggtcgtctctc
aagattgaagagcgagcagaatttttgaataagtctgtgcagaaaagcagtggtgtcaaa
tcaactcatcaagcagcagtagtgtccaagattgacagccgattggagcagtataccagt
gcgattgaggggaccaaaactgcaaaatctacaaaaccagcggcctcagatctccctgtg
cctgcggaaggtgtacgcaatatcaagagcatgtgggagaaaggcaatgtgttctcggcc
cctgctgcatcaggcacacccaataaggaaaccgctggcctgaaggtgggagtttccagc
cgcatcaacgaatggctaaccaaaaccccagatggcaacaagtcgcccgctcccaagcct
tctgacctgaggccaggtgacgtatctggcaagcggaacctctgggagaagcaatctgtg
gacaaggtcacttcccccactaaggtttga
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