Ochotona princeps (American pika): 101532355
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Entry
101532355 CDS
T07609
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
opi03037
]
101532355 (CFAP43)
Cilium and associated proteins [BR:
opi03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
101532355 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC_Cfap43
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
WDR55
Beta-prop_EML
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
101532355
NCBI-ProteinID:
XP_036351634
LinkDB
All DBs
Position
18:21430603..21523101
Genome browser
AA seq
1663 aa
AA seq
DB search
MAQGREREEGSSGASLSVRWVQGFPKQNVHFVNDKTICYSSGNYVIFINIETKKKTVLQC
MNGIVGVIATNVPYEVVAFSDRKLKPLIYIYNFPGLTRRTKLKGNVLLDYTLLSFSYCGT
YLATYSSLPEFELALWNWESNVILCKRSQPGVDVSQMSFNPMNWHQLCLSSPSTVTVWTI
ERSNQEHYFKEKSVKLPLEDGSFFDETDVVFPSTVPKDPIYGPVLPLSAIAGLVDEEAET
FRPKDDLYPLLHPTVHCWTPTSDLYVGCEEGHLLMVNGDTLKVTVLNKMEEEPLDGRNLI
SPVTMVYQKEGVFASGIDGFVYSLIIKDSNYRIENFLEIEEPVGHLMFSPSYKMLLIQTD
KGSVYIYTFGKEANLDKILDACDGNFQAVDFITPGNKHFMTLTPSGEVCVWWMEECVCAS
KIYLNTPATSLACSPSSFSAAVGTVDGCVHFLSVLDIESPKEIHNAFLSESSVEHVTYDQ
RGLYLLVGTSEGNIFVMNASPSSSFQILGFTEVGKDILQISTVSLLETERVKVLVLYPHP
ETGRSRLEIFTLPRPLPEVLASCADERGRLRDEFIRKNLYELEHSLSSAVLEFQSNRIYG
FCDQVPYICSYLLPKKDHNDVHVLKPFQKVQSKHYGPGMLFLSSHGLWVITIAKCGILCI
RDVYTLETFARCRSHSHQGHGIQSMRISIDGQSILVNGQDDGTLVFLKWKRFGGSLATDT
AEYFQQLFSSLSSTMEEENDYLLNQQRVSIDMEHESEHTVDKSSTDTLSQEELDIPNDVK
KIPWIQQKTQEAIKKEVKLFSQKRKEIKTRIRALAKTIQDMMEENEQVDDIAKLDQYEFG
LDLEELERLHDENEEEVAKMKKDVEMHNLAKSYLAEIIKEECWNSMVVKGRSLKCFHIPC
VVENFPMKERSPEEMEELKRVLQQKKTEAECLKLQKEIIEVQSAAALVKKHHEEDDEEEE
DKNKPVKDTNLPNYLLGSLSTDFGVDISMLSSQLELHSREEKVNQIVLLKDIIYKVKTVF
NHEFDAAYKQKEFEIARVTERNIRIKEIIRDLDLDETVWQPEFDDCEKPERTLVVSVDEI
KAHRHVKPWQKAKAEVTATQEMERRFQIRSADIRHRALMDMMGGVLEVKKEDILKMAIPQ
PAFMAKPDAVWTEEERKQFKDYEKKVRELNEERDKYRKSLEAELKKLQNSIQESTQSFDD
HLKKLFERRVKAEMVVNQEELKINNLVFSLLLDEELNYRELFLNNYLTRKQEEKIQTTEA
IQKSREGLEMCKEHYDNLLAEDKVLDRSFKKEFSEIPSHQVDILYKLFKRRPRIHKQKPH
SDTTSIVSFGERPGSAKSNMEHHAQLMKAMDELDNISNMPEGLDPLVWDHFCVTRRAKVE
NEQKVKQKAAGLVEMAAFLRKRVEDDEKVQQDIDRVFQELILLQEEKVKFHLDLMIQILL
KQGQVELENFQLMLEYSDAILINKNIIEDLNSVIRTQGQKKIASMMESKEVHKGIFQIEW
EHKKMEMEMEDLNQKAWDIQMLFFSRDRQKYLNEPQYETLIAIQIGIMEQTIDVLDKTHK
KNVENCKRLLKKLLKFSNQKDIANFTLSCNLREELVAVSERQGICNSIGSKLTCEKIAKE
RYDNMIQQQKLTSISKQQAAQISILQAEVERLRMKTFPALVPM
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaggccgagagcgagaagagggttcctcaggcgcaagtctgtccgtgagatgg
gtgcaaggatttcccaagcagaatgttcattttgtcaacgacaagaccatttgctactcc
agtgggaattatgtaatattcattaatattgaaaccaagaaaaagactgtgctccagtgt
atgaatggaattgtgggcgtcatagcaactaatgttccttatgaagttgtggctttttct
gaccggaagctaaaacccctcatctacatatacaactttcctggattgaccagaaggacc
aaattaaaaggcaatgttctcctggactacacgttgctgtcgttcagttactgtggcacc
tacctggccacttattcctcactcccagaatttgaactggctctctggaactgggaatcg
aatgtcatcttgtgcaaaagatcacaacctggagtggatgtgagccagatgtctttcaat
cccatgaactggcatcagctttgcctgtcaagtccaagtacagtgactgtgtggaccatt
gaaagaagtaatcaggaacattatttcaaagaaaaatcggtaaagctacctctagaagat
ggttcatttttcgatgaaacagatgtggttttcccatcaactgtgcccaaggatcccatc
tatgggccagtgctgccactgtcagccattgccggactggtcgatgaagaagcagaaaca
ttcaggccaaaagatgatctgtatcctttgcttcacccaactgttcattgctggactcca
acaagtgatctgtatgttggctgtgaagagggccatcttttgatggttaacggagatacc
ctgaaggtgactgtgcttaataagatggaagaagagccattggatggaagaaatcttatc
agtccagtcaccatggtatatcagaaggagggcgtgtttgcttctggaattgatggcttt
gtgtattcgcttattattaaagattcaaattacagaattgagaattttcttgagattgag
gagcctgtgggccatttgatgttttctcctagttacaaaatgttgctgattcaaacagac
aagggatctgtttatatctacacttttggaaaagaggcaaacctggataagatactagat
gcttgtgatgggaattttcaggcagttgacttcattacacctggaaacaagcacttcatg
acactcacaccttctggggaagtctgtgtttggtggatggaggagtgtgtctgtgcaagc
aagatttatctgaataccccagcaacatctctggcctgctctccctcctccttctctgct
gctgtggggactgtggatggctgcgtccacttcctaagcgtccttgacatagaatcccct
aaggagattcacaacgccttcctgtccgagtcttctgtagagcacgtcacctatgaccag
cggggattgtatctgttggttggaacatctgaaggaaacatctttgttatgaatgccagc
ccctcaagctcatttcaaatccttggttttacagaggtgggcaaagacattttacagatc
tccacagtgtctctcctggaaacagagagagtgaaagtgctggtgctttacccacatccg
gaaacgggaagaagcaggttggaaatattcacgttgcctagaccactaccagaagtgctt
gcaagctgtgctgatgaaagagggaggctgagagatgagttcatccgcaagaacctgtat
gagttggagcactctctgtcctctgcagtcttggaatttcaaagtaaccgaatatatggc
ttctgtgaccaagtgccatacatctgtagctatcttcttcctaagaaagaccataatgat
gttcatgttcttaaaccattccaaaaagtacaaagcaagcattatggccccggaatgctt
tttctgtcttcacatggactatgggtcataacaatagctaaatgtggcattctgtgcatc
cgagatgtttatactttggaaacatttgctcgatgtcggagtcattctcaccaaggtcat
gggattcaatcaatgaggatttcaatagatggacaaagcatcctggtgaatgggcaagat
gatggcacacttgtcttcctcaaatggaagcgatttggaggaagcttagccactgacact
gctgagtatttccagcaattattcagttctctgagtagcaccatggaagaggagaatgat
tatttattaaatcaacaaagagtttctatagacatggaacacgaatctgaacacacagtt
gataagtcaagcaccgacacgttgtcacaagaggaattagacataccaaatgatgtgaag
aaaattccctggatacaacaaaaaacacaagaggccatcaaaaaagaggttaagttgttt
tcccagaaaagaaaagagataaaaacaagaatcagagcacttgctaagactattcaagat
atgatggaagaaaatgaacaagtagatgatattgcaaaattagaccaatatgaatttggc
ctggatcttgaggaattggaaaggcttcatgatgaaaatgaggaagaagtggcaaagatg
aaaaaggatgtagagatgcataacctggccaagagctatctggctgaaattatcaaggaa
gaatgctggaattctatggttgtgaaaggtcgatctcttaagtgcttccacatcccttgt
gtagttgagaacttcccaatgaaggaacgttcacctgaagaaatggaagaattgaagcga
gttttgcagcaaaagaagactgaagcagagtgtcttaaattacagaaggaaattatagag
gtccagtctgcagctgcattggttaaaaaacatcatgaagaagatgatgaagaagaggaa
gacaaaaataagccagtaaaagataccaacttgcccaattatctgctcggaagtttaagt
actgattttggggtagatatttctatgttatcgagccaattggaacttcattccagagaa
gagaaagtcaaccaaattgtattactgaaagatatcatctacaaggtaaaaactgttttc
aatcatgagtttgatgctgcatataaacaaaaagaatttgaaatcgctcgtgtgacagaa
agaaatattagaattaaagaaattattagagatctggacttggatgaaacagtctggcaa
ccagaatttgacgactgtgagaagccagaaagaactctggtggtgtcggttgatgagatt
aaagctcacagacatgttaaaccatggcaaaaagccaaagcagaagtcactgcgacccaa
gaaatggaacgacggtttcagatacggagtgcagacataagacaccgagccctgatggac
atgatgggaggtgttctggaagtcaagaaggaagatattttgaaaatggcaatccctcag
cctgctttcatggcaaagcctgatgctgtgtggactgaagaggaaaggaaacaattcaaa
gactatgagaaaaaagtcagagagttaaatgaagaaagagataagtacagaaagtcatta
gaagcagaattgaagaaacttcaaaactctattcaagaaagcacacagagctttgatgat
catttgaaaaaactgtttgaaagaagagtcaaagcagagatggtcgtcaatcaggaagaa
ttgaaaataaataatcttgttttttctctactgttggatgaagaattaaactacagagag
ctatttctgaacaactatctcacaaggaaacaggaagagaaaatccagaccacagaagcc
attcagaaatctcgagagggactcgaaatgtgcaaggagcactatgacaacttactggcg
gaagacaaagttctagatcgtagctttaaaaaggagttttctgaaattcccagtcatcaa
gtggacatactctacaagctttttaaacgccgtccaaggattcacaaacagaaaccacat
tcggatacaaccagtattgtctcttttggagaacgaccaggatctgccaaatcaaacatg
gaacatcatgcccagctaatgaaagccatggatgagctggacaatatcagtaacatgcca
gaaggcttggaccctctggtctgggatcatttctgtgtaacaagacgagcaaaagtagaa
aacgaacagaaggtgaaacagaaagcagctggcctggtcgaaatggcggctttcctccgg
aaaagagtagaggatgatgagaaagtgcaacaggacattgacagggtcttccaagaactc
attctattgcaggaggagaaagtaaaattccacttggatctgatgatccaaattctactc
aaacaaggacaagtggaactggagaatttccagctaatgctagaatattcggatgcaatt
ctcatcaataagaatataattgaagacttgaattctgtgattcggactcagggacaaaag
aaaattgccagcatgatggaaagtaaagaagtacataaggggatatttcagattgaatgg
gagcacaaaaaaatggagatggaaatggaagatttaaaccagaaggcttgggatattcag
atgctgtttttttcaagagatcgtcaaaagtacctaaacgaaccgcagtatgagactctg
attgctattcaaattggaataatggagcaaaccattgatgttttagataagacccacaag
aagaatgtggaaaattgcaaaaggttactgaagaaattgttaaaattcagcaatcaaaaa
gatatagcaaatttcacactaagctgcaatctacgagaagagctggttgctgtctcagag
aggcaaggcatctgcaactcaataggctctaaactgacttgtgaaaagattgccaaagaa
cgatatgacaacatgattcaacaacagaagttgacaagtatttcaaaacaacaggctgca
cagatttccatactacaggctgaagttgaaagattaaggatgaaaacattccctgctctt
gttccaatgtga
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integrated database retrieval system
