Ochotona princeps (American pika): 101532516
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Entry
101532516 CDS
T07609
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04390
Hippo signaling pathway
opi04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
101532516 (LIMD1)
04392 Hippo signaling pathway - multiple species
101532516 (LIMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101532516 (LIMD1)
03036 Chromosome and associated proteins [BR:
opi03036
]
101532516 (LIMD1)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101532516 (LIMD1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
101532516 (LIMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf-ChsH2
Motif
Other DBs
NCBI-GeneID:
101532516
NCBI-ProteinID:
XP_004581456
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All DBs
Position
9A:complement(14899474..14937818)
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AA seq
662 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGASNNPEFEETRRVFATKMAKIHLQQQ
QQLLQEEALARGSRGFVNGPQAHHEAAGAGRLLGEAAARPPLAAPTVAATSVQPSYAASE
LRARPCAQSTKPGSQDCGSREGPAGSERSALQRPSICEDPSCLTHGDYYDNVPLAGTQWG
DAPPVANSISLGVGGAWSGPSASDPSLPRPCGDHRLYQLQPSLSLSRSPEHALGGQDAGI
GSRRAEKPTGLWATASSQRLSPALSSPGLENGVLGLGPMQSRTPSSVSASQALGCSGSGA
LPRTDSQLGSEVSGMTCKPAVDPQPWFQEGPKSYLSSSIPSSSLSATASKDSSQPGTVTS
GCADFSPAPKLNPASLIQPVMSTPPELPPKESPLGWSSEGSVGPEFPENSSRVRLPCQTL
VPGPELGPSAAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVFGAGQACQAMGNLYH
DACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMILQALGK
SYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPPEGSDETI
RVVSMDRDYHVECYHCEDCGVELNDEDGHRCYPLQDHLYCHSCHIKRLEPGPSPAALHQH
HF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggataagtatgatgacctgggcctggaggccagcaaattcatcgaggacctgaacatg
tacgaggcttccaaggacgggctcttccgcgtggacaagggtgccagcaacaaccctgaa
tttgaggagactcgcagggtatttgccaccaagatggccaaaatccacctgcagcagcag
cagcagctcttgcaggaggaggccctggccaggggcagcagaggctttgtcaatggcccg
caggcccaccatgaagctgctggggctggcaggctacttggagaggctgctgcccgtccc
cctcttgctgcccccacagtggcagccacctcggtgcagccctcgtacgctgcatcagag
ctgagggccaggccctgtgcccagagcaccaagccgggcagccaggactgtggctccagg
gaaggccctgccggttcagaaaggtccgccctgcagcggcccagcatctgcgaggaccct
tcatgcctcactcacggagactattacgacaatgtgcccctcgcaggcacacagtggggt
gatgcacccccagtggccaacagcatcagcctgggtgtaggtggtgcgtggtctggtccc
tcagcgagtgacccgtcgttgcccagaccctgcggggaccaccgcctgtaccagctgcag
ccctctctcagcctgagcaggtctcctgagcatgctcttggtggccaggatgctggcatt
ggcagccgcagagctgagaagcccacaggcctttgggccacggcctcctcccagcggctg
agccctgctctgtcttctccaggcttggagaatggggtcctaggcttggggcccatgcaa
tccaggaccccctcctctgtctcagcatcccaggccctaggctgctctggttcgggggcg
cttcccagaacagattcacagctggggagtgaggtctcaggcatgacgtgcaaacctgct
gtggaccctcagccctggttccaggaggggcccaagtcttacctgtccagttctatccca
tcttcttcgttgtcagcaacagccagcaaggacagttcccagccgggcactgtcacatca
ggctgtgcagatttcagcccagctcccaagctcaaccctgccagccttatccaacctgtg
atgtccactccgcctgaactgcctcccaaggagagtccccttgggtggtcctctgaaggt
agtgtgggtcctgagttcccagagaactcctcccgggtgaggctgccctgccagaccctg
gtgccaggcccagagctaggcccatcagccgctgagttaaaattggaagccctcacccag
cgcctggagcgagagatggatgcccacccgaaggccgattattttggagcatgtgtgaaa
tgcagcaaaggcgtgtttggggccggccaggcctgccaggccatggggaacctctatcat
gacgcgtgcttcacctgtgcggcctgcagccggaagctgcgaggaaaagccttctatttt
gtcaacggcaaagtgttctgtgaggaagacttcctgtactcgggcttccagcagtctgcc
gacaggtgctttctgtgcggccacctgatcatggacatgattctacaggccttggggaag
tcctaccacccgggctgtttccgctgtgtcatctgcaatgagtgtttggacggggtgccc
ttcacggtggactctgagaacaagatctactgtgtccgcgattaccacaaggtgctggcc
cccaagtgtgcagcgtgtggactccccatcctccctcctgagggctcagatgagaccatc
cgtgttgtgtccatggacagagattaccacgtggagtgctaccactgcgaggactgcggt
gtggaactcaatgacgaagatggccaccgctgctacccgctgcaggaccacctgtactgt
cactcctgccacatcaagcggctggagccgggcccctcgcccgcggccctccaccaacac
cacttctag
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