Ochotona princeps (American pika): 101532612
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Entry
101532612 CDS
T07609
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opi03009
]
101532612 (DDX10)
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101532612 (DDX10)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
90S particles
Helicases
101532612 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
101532612
NCBI-ProteinID:
XP_004585094
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All DBs
Position
1:29451440..29653539
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AA seq
872 aa
AA seq
DB search
MGKTADRRAPGARLDPVRSFNRWKKKHSHRQKQKKQLRKQQKKPEWQVEREGISRLVENY
GKINVNEITRFSDFPLSKKTLKGLQEAQYRVVTEIQKQTIGLALQGKDVLGAAKTGSGKT
LAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKD
LKHEAERINNINILVCTPGRLLQHMDETICFHATNLQILVLDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIVCELPQK
ISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNE
FVRKKAAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRAGRTARYKEGGEALLILL
PSEEKGMVQQLLQRKVPVKEIKINPEKLMDIQKKLESFLAQDQDLKERAQRCFVSYIRSV
YLMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQKMQKQCSKELVMNKASKAGEPAVPS
LTNDEVEEFRTYFSEKMSILQNGGKSLDQTEDGLSNGTSDEEQEDEEEVEEKLGKTKESQ
IQPASGTAEAQKQREVPLQFLDRDEEEEDGPDGDFLKVKRHNVFGLDLKEKNELEKKEPT
KSKVKKKVTKVAEAKRVMKRNFKVNKKITFTDDGELVQQWPQMQKTITQDPEGDDDTGGI
NLDKAKERLQEEDKFDKEEYRKKIKAKHRERRLKEREARREASKRQAKAKDEEEAFLDWS
DDDDDGGFDPSTLPDPDKYRSSEESDSEDMENRMSDTKKKQGMKKRSSEVENDGPASRGR
KKAKWEALEPLDTGLSLAEDEELVLHLLKSQK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaactgctgaccggcgggctccaggagcgcggctcgacccggtgcggagcttt
aatcgctggaagaagaaacacagccacagacagaagcagaagaagcagttgaggaaacag
caaaagaagcccgaatggcaggtggagcgcgagggaatcagccgcctcgtggagaactac
gggaagataaatgtgaatgaaattacaagattttcagattttcccttatccaagaaaaca
ctgaaaggtttgcaagaagcacagtaccgcgtggtgactgagatacagaagcagacgatt
ggcctggctttgcaagggaaagatgtgctgggagctgccaagactgggtctggcaagact
ttggctttcttggttccagtgctggaagccctgtatcgtctgcagtggacttcaacagat
ggcctaggggttctgataatatcgcctactagagaactggcctatcagacctttgaggtt
ctccggaaagtggggaagaatcatgacttctcggctggcctcatcattggtggaaaggat
ctgaagcatgaagccgagaggatcaacaacataaacatactcgtttgcacaccgggtcgg
cttcttcaacacatggatgaaacaatatgttttcacgcaaccaatctccaaattttagtt
cttgatgaggcagatagaatcttggatatgggttttgctgataccatgaatgccatcatt
gaaaatcttcccaagaagcgtcagactttacttttttcagcaacacaaaccaaatctgta
aaggaccttgcacgcttgagtttgaaagaccctgagtatgtctgggttcatgaaaaagca
aaatacagcactcctgccactttggaacagaactatatagtgtgtgagctgccgcaaaaa
ataagtgtgctatactcgtttttgagaagccacctgaagaagaagagtattgtgtttttc
tccagttgcaaagaggttcagtatctgtaccgagtgttctgtcggctgcgtcctggtatc
tccatccttgccctccatggtcgacagcaacagatgagaagaatggaagtctataatgaa
tttgtccgcaagaaagctgcagtgctgtttgctactgatatcgctgccaggggcctagat
tttccagctgtgaattgggttcttcagtttgactgtccagaggatgccaacacttatatt
cacagagcaggtagaacagccaggtacaaagagggtggagaagctttattgattttgctc
ccatcagaagaaaaagggatggtgcagcagcttctgcagaggaaagttcctgtgaaagaa
atcaaaatcaatccagaaaaacttatggatatccagaaaaaattggaatcatttttagct
caagatcaagatttgaaagaaagagctcaaaggtgttttgtctcctatatacgttcagta
tatctcatgaaagataaagaagtatttgatgtaagcaagctacctattcctgaatatgcc
ttatctcttggtcttgctgtggcaccacgtgtaaggtttcttcagaaaatgcagaaacag
tgcagcaaagaattggtaatgaacaaggccagtaaagcaggtgagccagcggttccctcc
ctcaccaatgatgaagtagaagaattcagaacctatttcagcgagaaaatgtccattctc
cagaatggtgggaagagcctagaccagacagaggatggactgtctaatggtaccagtgat
gaagaacaagaagatgaagaagaagtggaagaaaaactgggaaaaacaaaagagtctcaa
attcaacctgcctctggtactgctgaggcacagaagcagagggaagttcctctgcagttc
ctagacagagatgaggaggaagaagatggacctgatggggatttcttgaaggtgaagcga
cacaatgtgtttgggttggatctcaaagagaagaatgaattagagaagaaagaacctact
aaatcaaaagtcaagaaaaaagtgaccaaagttgcagaagccaaaagagtaatgaagaga
aatttcaaagtgaataagaaaataacttttactgatgatggggagttggttcagcagtgg
ccacaaatgcagaagaccattacacaagatcctgagggagatgatgacacgggtggtatc
aacttagacaaagcgaaggaaaggcttcaggaagaggacaaatttgacaaagaagaatat
agaaagaaaattaaggcaaaacatcgggagagaagactgaaagaaagagaagccagaaga
gaagccagcaagagacaagcaaaggccaaagatgaagaagaagcctttctggactggagt
gatgatgatgatgatggtggatttgatccgagcacacttccagatcctgataagtacaga
agttctgaagaatcagatagtgaagatatggaaaatagaatgagtgataccaagaagaag
cagggaatgaagaaaaggagcagcgaagtggaaaatgatggaccagcaagtcgtgggagg
aagaaggccaagtgggaagccctggagcctctggatacaggcctgtctttagcagaggat
gaagagctggtgttgcacctgctgaaaagtcaaaagtag
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