KEGG   Ochotona princeps (American pika): 101532669
Entry
101532669         CDS       T07609                                 
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-1-like
  KO
K05719  integrin beta 1
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03271  Virion - Rotavirus
opi04015  Rap1 signaling pathway
opi04145  Phagosome
opi04151  PI3K-Akt signaling pathway
opi04360  Axon guidance
opi04510  Focal adhesion
opi04512  ECM-receptor interaction
opi04514  Cell adhesion molecules
opi04530  Tight junction
opi04611  Platelet activation
opi04670  Leukocyte transendothelial migration
opi04810  Regulation of actin cytoskeleton
opi04820  Cytoskeleton in muscle cells
opi05100  Bacterial invasion of epithelial cells
opi05133  Pertussis
opi05135  Yersinia infection
opi05140  Leishmaniasis
opi05145  Toxoplasmosis
opi05165  Human papillomavirus infection
opi05200  Pathways in cancer
opi05205  Proteoglycans in cancer
opi05222  Small cell lung cancer
opi05410  Hypertrophic cardiomyopathy
opi05412  Arrhythmogenic right ventricular cardiomyopathy
opi05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    101532669
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    101532669
   04151 PI3K-Akt signaling pathway
    101532669
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101532669
   04514 Cell adhesion molecules
    101532669
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101532669
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101532669
   04530 Tight junction
    101532669
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101532669
   04810 Regulation of actin cytoskeleton
    101532669
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    101532669
   04670 Leukocyte transendothelial migration
    101532669
  09158 Development and regeneration
   04360 Axon guidance
    101532669
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101532669
   05205 Proteoglycans in cancer
    101532669
  09162 Cancer: specific types
   05222 Small cell lung cancer
    101532669
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101532669
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    101532669
   05133 Pertussis
    101532669
   05100 Bacterial invasion of epithelial cells
    101532669
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    101532669
   05140 Leishmaniasis
    101532669
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    101532669
   05412 Arrhythmogenic right ventricular cardiomyopathy
    101532669
   05414 Dilated cardiomyopathy
    101532669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:opi04131]
    101532669
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:opi04147]
    101532669
   04515 Cell adhesion molecules [BR:opi04515]
    101532669
   04090 CD molecules [BR:opi04090]
    101532669
Membrane trafficking [BR:opi04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    101532669
Exosome [BR:opi04147]
 Exosomal proteins
  Proteins found in most exosomes
   101532669
Cell adhesion molecules [BR:opi04515]
 Integrins
  Integrin beta subunits
   101532669
CD molecules [BR:opi04090]
 Proteins
  101532669
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt PSI_integrin I-EGF_1 EGF_2 vWA_SIBA-E
Other DBs
NCBI-GeneID: 101532669
NCBI-ProteinID: XP_036351082
LinkDB
Position
16:78408045..78479899
AA seq 735 aa
MHLQLIFFIGLIGSICCVFGQTDENRCIKANAKSCGECIQAGPNCGWCTNSTFLQEGMHT
SAQCNDLEALKKKGCHPDGIENPRGSTAIKKNKNVTNRSKGTAEKLQPKDITQIQPQQLA
LQLRSGEPQTFMLKFKHVEDYPVDLYCLMDLSYSMKDNLENVKSLGTDLLNRMSSVISEF
RLGFGSFVEKTVMPYISTTLAKLRNPYTSEQNCTSLFNCKNVLSLMEDGTVFNRLVGQQH
ISRNLGSPEGGFDAIMQVAVCRGECSLIRWRNVTRLLVFSTDAGFRFAGDGNLGGIVLPN
NGQCHLENNMYTMNCYYDYPSVAHLIXKLSENNIQTMSGVTEEFQPVYKEVKNLIPKSAV
GMLSANSSNVIQLIIDAYSSLSSEVILENSKLTEGVTINYKTYCKNGVNGTGDNGRKCSN
ISIGDEVQFEISITLLQGCTPTTSNQCPNKNSETIKIKPLGFTEEVVVVLEFICECECQD
AGITASPQCHDGNGTFECGACRELLYFSGKGICKCRMCECNPNYTGSACDCSLDTTSCMA
TNGQICNGWSICECGICKCTDPKFQGQTCEMCXTCLGVCGEHKECVHCQAFNKGEKKXTQ
ECSHFTITKVENWDQLPQPGQVDPLSHCKQKDADDYWFYFMYSVSGSNEAVVHVIETPEC
PTGPDIIPIIAGVVAGIILIGLALLLSWKLLMIIHGRMKFAKFEKEKMNAKWDTGKNPVY
RRVVTTVINPKYEGK
NT seq 2208 nt   +upstreamnt  +downstreamnt
atgcatttacaactgattttcttcattggactgatcggttcaatttgctgtgtgtttggc
caaacagatgaaaatagatgtataaaagccaacgctaagtcctgtggagaatgcatacag
gcaggccccaattgtgggtggtgcacgaattccacctttctacaagaaggaatgcatact
tctgcacagtgtaatgatttagaggccttgaaaaagaaaggctgccatccagatggcata
gagaatcccagaggttccacagccatcaagaaaaataaaaatgtcaccaaccgtagcaaa
ggaacagcagagaagctgcagcccaaagacatcactcagatccagccacagcagctggct
ctgcagctgcgatcaggagagccacagacgtttatgttgaagttcaaacatgtggaggac
taccccgttgacctctactgcctcatggatctctcctactccatgaaggacaacctggaa
aacgtcaagagtctggggacagatctgttgaacaggatgagttcagtgatttcagaattc
cgactcgggtttggctcctttgtggagaaaaccgtgatgccttatattagcaccacactt
gctaagctcaggaacccttacacaagtgagcagaactgtaccagcctcttcaactgcaag
aatgtactcagcctcatggaggatggaacagtgtttaacaggctcgtcgggcagcagcat
atttccagaaatctgggctctccagaaggtggatttgatgccatcatgcaagttgcagtt
tgtaggggtgagtgttcactgatcagatggaggaatgtcacccggctgctggtgttctcc
acggatgctggcttccgcttcgctggagacgggaatcttggtggcattgttttacccaac
aatggacagtgccacctggaaaacaacatgtataccatgaactgctattatgactatcct
tctgttgctcatctcatctagaaactcagtgaaaataacattcagaccatgtctggtgtt
actgaagagtttcagcctgtttacaaggaagtgaaaaacttgatccctaagtcagcagtg
ggaatgctgtctgcaaactccagcaatgtcatccagctgatcatcgatgcctacagttcc
ctttcctcagaagtcatcttggaaaacagcaaattgacagaaggagtaaccataaattac
aaaacttactgcaagaatggggtgaatggcacaggggataatggaagaaagtgctcaaac
atctccattggagatgaggttcagtttgaaatcagcattactttgttgcagggctgcacc
ccaacaacttcaaatcagtgtccgaataagaattctgaaaccattaaaatcaagcctctg
ggcttcactgaggaggtcgtggtggttcttgagttcatctgtgagtgtgagtgccaggac
gcaggcatcacggccagtccccagtgccatgatgggaatggcacatttgagtgtggggcc
tgcagggagttattgtacttttcaggaaaaggcatctgcaagtgtcgcatgtgtgagtgc
aatcctaactacactggcagtgcgtgtgactgttctctggatacgacttcttgcatggcc
acaaacgggcagatctgcaacggttggagtatctgtgagtgtggcatctgcaagtgcacg
gatcccaagtttcaagggcaaacctgtgagatgtgcnagacctgcctgggcgtctgtggt
gaacataaagaatgtgttcattgtcaagccttcaataaaggagaaaagaagtgaacacaa
gagtgttcacatttcaccatcaccaaggtggaaaactgggaccagctgcctcagcctggc
caggtggaccccctgtcccactgcaagcagaaggacgcggatgactactggttctacttc
atgtactcggtgagtggcagcaatgaggccgttgttcatgtcatagagactccggagtgt
cccactggtcctgacatcattccaatcatagctggtgtggtcgctggcattatcctcatt
ggcctcgcgttgctgctgagttggaagctgctgatgataattcatggcagaatgaaattt
gctaaatttgaaaaggagaaaatgaatgccaaatgggacacgggtaaaaatcctgtttac
aggagagttgtgacaactgtgatcaacccaaaatatgagggaaagtga

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