Ochotona princeps (American pika): 101532688
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Entry
101532688 CDS
T07609
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101532688 (WDHD1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
101532688 (WDHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Ctf4_C
HMG_WDHD1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_IFT140_1st
Beta-prop_HPS5
WDR55
Beta-prop_WDR19_1st
eIF2A
HMG_box
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_Nup120_160
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NrS1-1_pol-like_HBD
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
101532688
NCBI-ProteinID:
XP_012782284
LinkDB
All DBs
Position
17:18172891..18232819
Genome browser
AA seq
989 aa
AA seq
DB search
MPATQKPMRYGHTEGHTDVCFDDSGSDFLVKIVDVMDSSQQKTFRGHEAPVLSLSFDPND
VFLASSSCDGSVRVWQISDQTCAVSWPLLLKCNDVIHAKSICRLAWQPKSGELLAVPVEK
SVKLYRRETWSNPFELSDNFISQTLNVVTWSPCGQYLAAGSINGLIVVWNVETKDCVERV
KHEKGYAICGLAWHPTCGRISYTDAEGNLGLLENVCDTSGKAPVSKVSNRVEKDYDDLFD
GDDSSNAGDFLSDNAVEVPFSKRTVNNDEDADDFLLTSGRFRQRSHVLEDDDNSVDLTML
KTGLLKEEAGDEPAGSFHNQPVVSSQQPLYEGPMPTPRQKPFQSASTPVHLTHRFMVSLG
LTRLFSKLHCLHFSSWDSSKEWIVDMPQNEDIEAICLGQGWVAAASSALLLRLFTIGGVQ
KEIFSLPGPVVSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQILRGDPLPLTR
KSYLAWVGFSAEGTPCYVDSEGCVRMLNRGLADMWTPVCNTREHCKGKSDHYWVVGIHEN
PQQLRCIPCKGSRFPPTLPRPAVAILPFKLPYCQTATEKGQMEEQFWRSIMFHNHIDYLA
KNGYEYEESTKNQAIKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRS
RKLILAQKLSELAVEKASELAVTQVEEEEEEDFRKKLNAGYSNTATEWKQPQLRNQMEED
SENNKETDETEQNPDLHRHGQTLFPKSANSSNVPAVKSGAVTSNSQGRVNPFKVSSSSKE
PAMSVNSPRSTTILDSMNKFSRKPTALNRAASSNDKSPVIKPLLIPKSKSKQASAASYFQ
KKSSQADTTEEVKEEENPKNSSSENSAPCPDNTENQRPKTGFQMWLEENRSNILSDNPDF
SDEADIIKEGMIRFRVLSTEERKAWTDKAKGGNAAEGAEAKKRKRVVSENEETEDHKEKA
KENLNGPKKQKPLHISTNQKLSAFAFKQE
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgccggccactcagaaaccgatgagatacggacatacagagggacacacggatgtctgc
tttgatgattctgggagtgacttcctagttaaaattgtggacgtgatggatagcagccaa
cagaaaacatttcgaggacatgaggctcctgttttaagtctctcttttgatcctaatgac
gtctttctggcatcatccagttgtgatggctctgtcagagtgtggcaaatttcagatcag
acatgtgctgtaagttggccactgctactaaaatgcaatgatgtgatacatgcaaaatcg
atctgcagacttgcttggcagccaaaaagtggggagttactggcagttcctgtggaaaaa
tctgttaaactatacagaagagaaacttggagtaatccttttgagctgtcagataatttc
atctctcagaccctcaatgtggttacctggtctccctgtgggcaatacttagctgcaggc
agtattaatggcttaattgtagtttggaatgtggaaaccaaagactgtgtggaaagggtg
aagcatgagaaaggatatgcaatttgtggcctggcttggcatcctacttgtggtcgaata
tcctatactgatgccgagggaaatctcgggctcctcgagaatgtttgtgacaccagtggg
aaggcaccagtcagtaaggtatctaatagagtggaaaaggattacgatgacctcttcgat
ggagacgactccagtaacgctggtgatttcctcagtgacaatgcggtcgaggtccctttt
tcaaagaggactgtaaacaatgatgaggatgctgatgacttcttgctgacttcagggcgt
tttcgacagcgaagccatgtcttggaagatgatgacaactcagttgatctaacaatgctg
aaaactggtctgctcaaagaggaggcaggtgatgaaccggctggcagctttcataatcag
cctgtggtctcatctcagcagccgctttatgaagggcccatgcccactccccggcagaag
cccttccagtcagcttctacccctgtgcatctcacacacagattcatggtaagccttgga
ttgacacgtttgtttagcaagcttcactgtctgcactttagttcttgggattcaagcaaa
gagtggatagtggacatgcctcagaatgaggacattgaagccatatgtctcggtcagggg
tgggtggccgctgcctcgagtgccttgctccttcgtttgttcactattggtggcgttcag
aaagagatcttcagccttcctgggccagtggtgtcaatggcaggacacggagaacagctt
ttcattgtttaccacagaggtacaggatttgatggggatcagtgtcttggagttcagctg
ctggagctggggaaaaagaagaagcaaattctgcgtggagaccctcttcctcttacaagg
aaatcttaccttgcatgggttgggttttcagctgaaggtactccgtgttacgtggactca
gaaggctgtgttcgaatgcttaacagaggccttgctgacatgtggactcccgtatgtaac
accagagagcactgcaaaggaaaatctgatcactattgggtagttggcatccatgaaaat
ccccagcagctgaggtgcattccttgcaagggttctcgatttcctccaacccttccacgt
cctgctgtggcaatattaccctttaagctaccctactgccagactgcgacagagaaagga
caaatggaggaacaattttggcgttcaattatgtttcacaaccacattgattatttagct
aaaaatggttatgaatatgaagagagtactaaaaatcaagcaatcaaagaacaacaggaa
cttttaatgaaaatgcttgcgctttcttgtaaactggagcgggaattccgatgtgtggaa
cttgctgatctaatgactcaaaatgctgtgaatttagccattaaatatgcttctcgctct
cggaaattgatactggctcaaaaacttagtgaattggctgtggagaaagcatcagaattg
gcagtaactcaagtggaagaggaggaagaagaggatttcaggaaaaagctgaatgccggt
tacagtaatactgctacagagtggaagcagccacaactcagaaaccaaatggaagaagat
tctgagaacaataaagaaactgatgaaacagaacaaaacccagacctacatcggcatgga
cagacattgtttcccaaaagtgccaattcctccaatgtgcctgctgttaagtcaggtgcg
gtgacctctaacagccaaggacgagtaaaccccttcaaggtgtcaagcagctctaaagaa
ccagcgatgtcagtgaattcaccacgttccactactattttagacagtatgaacaaattc
tccaggaaacccactgcactcaatagagccgcaagtagtaacgataagtctccagttata
aaacctctgctcatcccaaagtcaaagtctaagcaggcatctgcagcatcctatttccaa
aaaaaatcttctcaggctgatacgactgaggaagtgaaagaagaagaaaatcctaaaaat
tcatcctctgaaaactcagctccgtgtcctgacaacactgaaaaccaaaggccaaagact
gggttccagatgtggctggaagaaaacagaagcaatattttgtctgacaatcctgatttt
tcagatgaagcagacataataaaagagggaatgattcgatttagagtactgtcaactgaa
gaaagaaaggcatggactgataaggccaagggtggaaatgctgctgagggagctgaagca
aagaaacgaaagcgtgtggtcagtgaaaacgaggaaacagaagaccacaaggaaaaagcc
aaggagaatctgaatggacctaaaaaacaaaaacctttacatatttctacaaatcagaaa
ctgtcagcttttgcattcaagcaggaataa
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