Ochotona princeps (American pika): 101532702
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Entry
101532702 CDS
T07609
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03018
RNA degradation
opi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101532702
09123 Folding, sorting and degradation
03018 RNA degradation
101532702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101532702
03041 Spliceosome [BR:
opi03041
]
101532702
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101532702
mRNA degradation factors
5'-3' decay
Lsm complex
101532702
Spliceosome [BR:
opi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
101532702
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
101532702
NCBI-ProteinID:
XP_036350154
LinkDB
All DBs
Position
13:complement(50345994..50349909)
Genome browser
AA seq
177 aa
AA seq
DB search
MATNSQSHLAGKMAAKDRALGMSLGSSHVVQYSAECTIVTAIQNWEDGGERTRVAGPVGA
HKGGGPATSRSRLSPQDKEKKKKESILDLSKYIDKTIHVKFQGGREASGVLKGFNPLLNL
VLDGTIEHMRDPDDQYRLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFVPQQDT
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaatagtcaaagtcatcttgcaggcaagatggcggccaaagacagagccctg
ggcatgagcctgggcagcagtcacgtagtgcaatacagtgcggagtgcacgattgttaca
gctatacagaattgggaagatggcggtgagcgcacgcgggttgcgggcccagttggggcg
cacaaagggggcggcccggctacctcacgctcgcggctctccccgcaggacaaggagaag
aagaagaaggagagcatcttggacttgtccaagtacatcgataagaccatccacgtcaag
ttccaggggggccgcgaggccagtggggtcctgaagggcttcaacccgctgctgaacctg
gtgctggacggcaccattgagcacatgcgagatccggacgaccagtacagactgacggag
gacacgcggcagctgggcctggtggtgtgccgaggcacctcggtggtgctcatctgtccg
caggacggcatggaggccatccccaaccccttcgtcccgcagcaggacacctag
DBGET
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