Ochotona princeps (American pika): 101532812
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Entry
101532812 CDS
T07609
Symbol
PRPF31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101532812 (PRPF31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101532812 (PRPF31)
Spliceosome [BR:
opi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101532812 (PRPF31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
101532812
NCBI-ProteinID:
XP_004596990
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All DBs
Position
5:complement(598113..605422)
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AA seq
499 aa
AA seq
DB search
MSLADELLADLEEAAEEEEGGSYGEEEEELTIEDVQEDTQLDLSGDSVKSIAKLWDSKMF
AEIMMKIEEYISKQAQAAEVLGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSK
RFPELESLVPNALDYIRTVRELGNSLDKCKNNENLQQILTNATIMVVSVTASTTQGQQLS
EEELERLEEACDMALELNASKHRIYEYVESRMSFIAPNLSIIIGASTAAKIMGVAGGLTN
LSKMPACNIMLLGAQRKTLSGFSSTSVLPHTGYIYHSDIVQSLPPDLRRKAARLVAAKCT
LAARVDSFHESTEGKVGYELKDEIERKFDKWQEPPPVKQVKPLPAPLDGQRKKRGGRRYR
KMKERLGLTEIRKQANRMSFGEIEEDAYQEDLGFSLGHLGKSGSGRVRQTQVNEATKARI
SKTLQRTLQKQSVVYGGKSTIRDRASGTASSVAFTPLQGLEIVNPQAAEKKVAEANQKYF
SSMAEFLKVKGEKSGILST
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggccgacgagctcctggctgacctggaagaggcggctgaagaggaagaggga
ggaagttatggggaggaagaggaggagctgaccattgaggatgtgcaggaggacacgcag
ctggacctctcgggagattcagtcaagagcatcgccaagctatgggacagcaagatgttc
gccgagatcatgatgaagatcgaggagtacatcagcaagcaagcccaggcggctgaagta
ctgggacccgtggaggcagcccccgaataccgcgtcatcgttgatgccaacaacctcacg
gtggagattgagaacgagctgaacatcattcacaagttcatccgggacaagtactccaag
aggttccccgagctggagtccctggtgcccaacgcactggactacatccgtaccgtgagg
gagctgggcaacagcctggacaagtgcaagaacaacgagaacctgcagcagatcctgacc
aacgccaccatcatggtcgtcagcgtcaccgcctccaccacccaggggcagcagctgtcg
gaggaggagctggagcggctggaggaggcgtgcgacatggcactagaactgaacgcctcc
aagcaccgcatctacgagtacgtggagtcccgcatgtccttcatcgcgcccaacctgtcc
atcatcatcggggcgtccacggccgccaagatcatgggcgtagctggcggcctgaccaac
ctctccaagatgcccgcctgcaacatcatgctgctgggcgcccagcgcaagacgctgtcc
ggtttctcgtccacctctgtgctgccccacaccggctacatctaccacagtgacatcgtg
cagtccctgcctccggatctgcggcggaaagcggcccggctggtggccgccaagtgcacg
ctggccgcccgcgtggacagtttccatgagagcacggagggcaaggtgggctacgagctg
aaggatgagatagaacgcaagttcgacaagtggcaggagccgccccccgtgaagcaggtg
aagccgctgccagcgccccttgatgggcagcgcaagaagcgaggtggccgcaggtaccgc
aagatgaaggagcgcctagggctcacggaaatccggaagcaggccaaccgcatgagcttc
ggcgagattgaggaggacgcctaccaggaggatctgggcttcagcctgggccacctgggc
aagtccggcagcgggcgtgtgcggcagacgcaggtgaacgaagctaccaaggccaggatc
tccaagaccctgcagcggaccctgcagaagcagagcgtggtgtacggcggcaagtccacc
atccgggaccgtgcctcggggactgcctccagcgtggcgtttacccccctgcagggccta
gagatcgtgaacccgcaggcggccgagaagaaggtggccgaggccaaccagaagtacttc
tccagcatggccgagttcctcaaggtcaagggcgagaagagtggcatcctgtccacctga
DBGET
integrated database retrieval system
