Ochotona princeps (American pika): 101532819
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Entry
101532819 CDS
T07609
Symbol
LTBP4
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101532819 (LTBP4)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
101532819 (LTBP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
hEGF
FXa_inhibition
EGF
EGF_3
EGF_2
Plasmod_Pvs28
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
101532819
NCBI-ProteinID:
XP_004598134
LinkDB
All DBs
Position
5:complement(7303395..7327014)
Genome browser
AA seq
1827 aa
AA seq
DB search
MPPARCVCRGEACTSASPLTPHLARGSLLPETVRRASTGPHTCPPLQPQPARAGAPPAPH
LSASPLPCRLVIGPPRRVLIGGKFTARGGDSGESESARGGVGARAGPAGRTARPERHSAR
DTMRRARLLPLLLLPLLAAAATASASPGPAVEATVIPGRPAGIVACRCCPGQTPKRIRCT
RASCRVQSCQPEKCKGHQQCRTPGPPGPGPSPSPSPSVSKKQVSLSWQPLTLQEAQALLR
LRRPWGPGGRALLLRRQPPQRTPASQASDLCPLICHNGGVCVKPDRCLCPPDFAGKFCQL
HSSGARPPAPAMPGLTRSVYTMPLANHRDDQHGVASMVSVHVEHPQEASVVVHQVERVSG
PWEEADAEAVARAEAAARAEAAAPYTVLAQSAPREDGYSDASGYGYCFRELRGGECASPL
PGLRTQEVCCGGDGAAWGVHDCQPCSAHVGNAHRMGAPDGPCPTGFERVNGSCEDVDECA
TGGRCQHGECANTRGGYTCVCPDGFLLDSSRSSCISQHVISEAKGPCFRVLREGGCSLPI
LRNITKQICCCSRVGKAWGRDCQLCPPFGSEGFREICPAGPGYHYSASDLRYNTRPLSQE
LPRVAVSRPRVPPATARPSTGVLPTYRPELRPEPQPSHERPSYERPSPERPSPERPSYER
PSPERPSYERPSYERPSPERPSYERPSHERPSYERPSPERPSPERPSHERPAPERPSYER
VSPDRPSHERPLPSIPAWTGPEITDSGAGLGMCQRNPQVCGPGRCIPRPSGYTCACDPGF
RLSPQGTHCLDVDECRRVPPPCAPGRCENTPGSFRCVCGPGFRAGPRGAECLDVDECHRV
PPPCDGGRCENTPGSFLCVCPAGYQAAPHGAGCQDVDECTQSPGLCGRGACTNLPGSFRC
VCPAGFRGSACEEDVDECAQEPPPCGPGRCDNTAGSYHCACPAGFRSRGPGAPCQDVDEC
ARSPSPCAYGRCENTHGSFQCVCPTGFQANAAGSACEDVDECENHLACPGQECVNTPGSF
QCRACPAGHQLHRGRCTDIDECSSGALCGPHGHCTNTEGSYRCSCAPGYRAPAGQPGPCA
DINECLEGDFCFPHGECLNTDGSFTCTCAPGYRPGPRGASCLDVDECSEEDLCQSGICTN
TDGSFECLCPPGHRASPDLASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHA
GPEGTCDDVDECQEYGPAICGAQRCENTPGSYRCTPACDPGYQPTPGGGCQDVDECRNRS
FCGAHAVCQNLPGSFQCLCDQGYEGARDRRHCVDVNECETLQGVCGSAQCENVEGSFLCV
CPNSPEEFDPMTGRCVPPRTAAGSFPASQPQAPESPSLPARPPPPAPPRRPSTPRQGAVS
SGRRECYFDTAAPDACDNILARNVTWQECCCTVGEGWGNGCRIQQCPGPETAEYQSLCPH
GRGYLAPSGDLSLRRDVDECQLFRDQVCKSGVCVNTAPGYSCYCSNGYYYHTQRLECVDN
DECADEEPACEGGRCVNTVGSYHCTCEPPLVLDGSRRRCVSNESQSLDDNLGVCWQEVGP
DLVCSRPRLDRQATYTECCCLYGEAWGMDCAFCPAQDSDDFEALCNVLRPPAYGPARPGG
FGLPYEYGPDLGPPYQGLPYGPELYAPAVLPYDPYPPPPGPFARREAPYGAPPFDLPDFE
DEGDRYSEPEAPARSGPGTGWPYRSRDTRGSFPEPEESSEGGGYAGALAEPYEALEEEEC
GILDGCDHGRCVRVPEGFTCNCFDGYRLDITRMACVDINECDEAAAASPLCINARCVNTD
GSFRCVCRPGFAPTHQPHHCAPARPRA
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atgcccccagcgcggtgtgtatgcaggggtgaagcctgcacctccgcctctcccctcacc
ccccatcttgcccgggggtctctgctccccgagacggttcgccgagccagcaccggaccc
cacacctgcccacccttacaaccccaacccgcgcgcgcgggagcgccccccgccccgcac
ctgtccgcctcgcccctcccctgccgcctcgtgattggcccgccacgccgggttctgatt
ggcggcaagttcacggcccgcggcggggacagcggagaaagtgagtcggcccggggcggg
gtcggggcgcgcgcgggacccgctggccggacggcccgcccggagcgccactcggcgcgg
gacacgatgcgccgggcccggctgctgccgctgctgctgctgccgctcctcgcagccgcg
gccaccgcctccgccagccccgggcccgccgtcgaggccacggtcatcccgggccgcccg
gccggcatcgtcgcctgtcgctgctgtcccggtcagacacctaaaaggattcgctgcact
cgagcctcctgcagggtccaaagctgtcaacctgaaaagtgcaaaggccaccagcagtgc
cggactccagggcctcctggccccggtcccagccccagccccagccccagcgtgagcaag
aaacaggtgtccctcagctggcagccactgacgctccaggaggcccaagctctactgaga
ctccggcggccctgggggccaggcggccgggcactgctgctgcgcaggcagcccccacag
cgcaccccagccagccaggccagcgacctgtgtcctttgatctgtcacaacggcggtgtg
tgcgtgaagcccgaccgctgcctctgcccgcccgacttcgctggcaagttctgccagttg
cactcgtcgggtgcccggcctccggccccggccatgccaggcctcacccgctccgtgtac
accatgccactggccaaccaccgcgacgaccagcacggcgtggcgtccatggtgagcgtg
catgtggagcatccgcaggaggcgtcggtggtggtgcatcaggtggagcgtgtgtccggc
ccttgggaggaggcggacgccgaggcggtggcgcgggcggaggcggcggcgcgggcggag
gcggcggcgccctacacagtgctggcccagagcgcgccgcgcgaggacggctactcggac
gcctccggctacggttactgctttcgggagctgcgcggaggcgaatgtgcgtcgccgctg
cccgggcttcggacgcaggaggtgtgttgcggaggggacggcgcggcctggggcgttcac
gactgtcagccgtgctccgcgcacgtggggaacgcccaccgaatgggcgccccagatgga
ccttgcccaacaggctttgaaagagtgaatgggtcctgcgaagatgtggatgagtgcgcg
acgggagggcgctgccagcacggggagtgtgcgaacacgcgtggcgggtacacgtgcgtg
tgccccgacggcttcctgctcgactcctcccgcagcagctgcatctcccagcacgtgatc
tcggaggccaagggaccctgtttccgcgtgcttcgtgaggggggctgctcactgcccatc
ctgcgcaacattaccaaacagatctgctgctgcagccgtgtgggcaaggcctggggtcgc
gactgccagctctgcccaccctttggctccgagggctttcgggagatctgcccagctggt
cctggctaccactactccgcctctgacctccgctacaacaccagacccctgagccaggag
ctccctcgtgtggccgtcagccggccacgtgtcccacctgccactgctcggccatccaca
ggggtccttcccacctaccgtccagaactccggccagagcctcagcccagccatgaacgg
cccagctatgaacgtcccagccctgagcggcccagccctgagcggcccagctatgagcgg
cccagccctgaacggcccagctatgaacgccccagctatgaacggcccagccctgagcgg
cccagctatgaacgacccagccatgaacggcccagctatgaacggcccagccctgagcgg
cccagccctgagcggcccagccatgaacgtcctgcccctgagcggcccagctatgagcgt
gtcagccctgaccgtcccagccatgaacggcccttgcctagcatccctgcctggactggt
cctgagataactgattcaggtgctggcctgggaatgtgtcagcgcaatcctcaagtctgt
ggcccaggacgctgcatacccaggcccagcggctacacctgcgcctgtgacccaggcttc
cggctcagcccccagggcacccactgcttggacgtggatgaatgtcgccgcgtgcccccg
ccatgtgcccccgggcgctgtgagaacacgccaggcagtttccgctgtgtgtgtggcccc
ggcttccgagctggtcccaggggtgctgagtgcctggacgtggacgaatgccaccgcgtg
ccgccgccgtgtgacggtgggcgctgcgagaacacgccaggcagcttcctgtgcgtgtgc
cctgccggataccaggctgccccacatggagccggctgccaggatgtggacgaatgcacc
cagagcccaggcctgtgtggccgaggtgcctgcaccaacctgcctggctctttccgctgt
gtgtgcccggctggcttccggggctcggcatgcgaggaggatgtggacgagtgcgctcag
gagcctccgccctgtgggccgggccgctgcgacaacacggcgggatcctaccactgtgcc
tgccctgccggcttccgctcccgtggccccggggccccctgccaagacgtggatgagtgt
gcccgcagcccctcgccctgtgcctacggtcgatgcgagaacactcatggcagtttccag
tgcgtctgccccacaggcttccaggccaacgctgctggctctgcgtgcgaggatgtggat
gagtgtgagaaccacctggcatgtcctgggcaggagtgtgtgaacacacctggctccttc
cagtgcagggcctgtcctgctggccaccagctgcaccgtggcaggtgcacagacatagat
gaatgcagttctggcgccctgtgcggtccccacggccactgcacgaacactgaaggctcc
taccgctgcagctgtgcgccaggctaccgggcaccggcaggtcagcccgggccttgtgca
gatataaacgagtgtctggaaggagacttctgcttccctcatggcgagtgcctcaacacc
gacggctccttcacctgcacctgcgcccctggctaccgacccggaccccgtggagcttct
tgccttgacgtggacgaatgcagcgaggaagacctttgccagagcggcatctgcaccaac
accgacggctccttcgaatgcctctgcccgccgggacaccgtgccagcccggacctcgcc
tcctgcctcgatgtggacgaatgtcgcgagcgaggcccagccttgtgcggctctcaacgc
tgtgagaactcccccggctcctaccgctgtgtccgggactgcgatcctggctaccacgcg
ggcccagagggtacctgtgatgatgtggacgagtgccaggagtatggtccagccatctgt
ggagcccagcgctgtgagaacaccccagggtcctaccgctgcaccccggcctgtgacccc
ggctatcagcccacaccaggaggcggatgtcaggatgtggacgagtgccggaaccggtcc
ttctgcggtgcacacgctgtgtgccagaacctgccgggctccttccagtgcctctgcgac
cagggctacgaaggcgcacgggacaggcgccactgcgtggacgtgaatgagtgtgagacg
ctgcagggggtgtgtggatccgcccagtgtgagaacgtggaaggctccttcctctgcgtg
tgccccaacagtcctgaggagttcgaccccatgactggacgctgtgttcccccacggacc
gctgccggttcgttcccagcctcgcagccccaggcacctgagagtcccagcctgccggcc
aggccgcccccaccagccccgccccggcggcccagcacccccaggcagggagccgtgagc
agcgggcgccgtgagtgttacttcgacacagcggccccagacgcgtgtgacaacattctg
gcccggaatgtgacctggcaggagtgctgctgtaccgtgggcgagggctggggcaatggc
tgccgcatccagcaatgcccaggtcccgagacagcggagtaccagtcgctgtgcccccac
ggccggggctacctggcacccagcggagacctgagcctccggagagacgtggatgaatgc
cagctcttccgagaccaggtgtgcaagagcggtgtgtgtgtgaacacagcccccggctat
tcgtgttactgcagcaacggctattactaccacacacagcggctggagtgcgtcgacaac
gacgagtgtgcggacgaggagccagcgtgcgagggtggccgctgtgtcaacaccgtgggc
tcctatcactgcacctgcgagcccccgctcgtgctggacggctcgcggcgccgctgtgtc
tccaacgaaagccagagcctcgatgacaacctgggggtgtgctggcaggaagtggggcct
gacctcgtgtgcagccgcccccggctggaccgccaggccacctataccgagtgctgctgc
ctctacggggaagcctggggcatggactgcgctttctgcccagctcaggactcagatgac
tttgaggctttgtgcaatgtgctgcggccgccggcctacggccccgctcggcccggtggc
tttggactcccctatgagtatgggccagacttagggccgccttaccagggcctcccatac
gggcctgagctgtatgcaccagccgtgctgccctacgacccctacccgccgccgcctggg
cccttcgcccgccgggaggccccctacggcgcgccccccttcgacctgcccgactttgag
gacgaaggggaccgctacagcgaacccgaggctcccgcgcgctctggcccgggcaccggc
tggccctaccggtcccgcgacacccgcggctccttcccggagcctgaggagtcatcggag
ggcggaggctacgcaggtgccctggccgagccctacgaggccctggaagaggaggagtgc
gggatcctggacggctgcgaccacggccgctgtgtgcgcgttcccgagggctttacctgc
aactgcttcgacggctaccgcctggacatcacgcgcatggcctgcgttgacatcaacgag
tgcgacgaggccgcggcggcgtccccgctctgcatcaatgcccgctgtgtcaacaccgac
ggttccttccgctgcgtctgccgcccgggcttcgcgcccacgcaccagccgcaccattgc
gcgcccgcgcggccccgcgcctga
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